Array 1 13884-13332 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOYB01000026.1 Bacillus mycoides strain OK634, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 13883 29 100.0 36 ............................. AACTGAAAGATCAATTAAAAATGGCTTGTGGTAGGG AT [13872] 13816 29 100.0 36 ............................. AAAGTAACAGAAGGAGAGAAAGTTGAAGTTAAACTT AT [13805] 13749 29 100.0 37 ............................. TCTATTAGAAAACACGGAGCATACATGACAGATCAAG 13683 29 100.0 36 ............................. AGGTATTATACAGATAGTGAGCGCAAGAGTTTATGT 13618 29 100.0 35 ............................. TGAAGTTAACGACGCAAATAAAGAACTCGTTAGAA 13554 29 100.0 36 ............................. TTAGTACAAAGCGTTCAAGAAATTTATCAAGGGTAA 13489 29 96.6 35 .......C..................... ATTAAATAATCAGCGCTGACATCAAAAATTTGTGC 13425 29 96.6 36 .......C..................... AGCATTAACATCTTTTGTTTCTTATCAAACTTCAGG 13360 28 86.2 0 ........CG...-..............A | T [13344] ========== ====== ====== ====== ============================= ===================================== ================== 9 29 97.7 36 GTTTTATTTAAACGTAGTGGGATATAAAC # Left flank : AAATTACTAAGCTTACTGTGAGTTTAAGGAAAACCTTAACTATGAGAAACACATCAAGATTACCGCATAAGGGAGTCAAAAAGAACGGAAAAAAATATGATTTATTACCATGGATTCAAATTTTAGATTTAGACTATGAATTCAATGAAAATTCAAAGACAGGTTCAGGTGTACTGTTAGATAAAAAAACAGAAAATTTCATTTAATAACCCACGCAACATAAAGAAAAAAGTATTTGGATTGAAAAAAGCTATGAAGAGCTATTTCTTTAAATTGAATTTTATAATATTTTATAATTTACTAAGATTATTTTATAGTAGCAACTATTTTTGCAGTGTATCTCTTTACTGTAAGTAAATGTTAACCCCCTTGTCTTCCAAGGCTTTAACGGCATTTTTGAAAAAGTTATGAAACAAGACTAACGATTCACTGCAAAACCTATAAGTTAAACACATTAGATTCCTTGCTTTAATGAGGTTTTATTCTACTTTTTATAGGGG # Right flank : GTTTGTAATGAAACCATAGTAATAGAGTCCTAATTAAAAAGGGCTCTATTTCTATGGTTGATACCTTCAAATTTTTTATCTTTCATTAGATCAATTTCACATTCAAGTTCTTTGGTTTCTATATTTAAAAAGTCCATTGTTATTGCAAGAACTTTTCCATCTTTATTTCTCTTAGATCCCCATAAACGAACAACCCTATTAATTTTACTATCTTCATATATAATTTGAACTGTTCTTAATTCTTCTCCATCCACAAATTCACGATGTATCCAACACTCTTTAAATTCCAAATTCTCATCAGATTTATGCATGTTATATTTCAACATTACTTCTTCTAATTCTGGGAACCCCAAGCCTTTTTTCTCCAAACAAATATACTCAAAATCCCAAAACTCTCTAAAATGATAGATAAGCTCTTTTTGACTTTTCATCATAATTCCCCCACCCCATAATTTTTTAAGCGCTATGTATATTTGATATCTGTTACATGATTGATTTTT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTAAACGTAGTGGGATATAAAC # Alternate repeat : GTTTTATCTAAACGTAGTGGGATATAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 22240-21755 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOYB01000026.1 Bacillus mycoides strain OK634, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 22239 29 100.0 37 ............................. AGAGGGTTCTGGTCTCATCGAGTTAATCACCGAGAAG 22173 29 100.0 36 ............................. GTACCTAAAACAGATTGTGGAAGGCTACCTTTGATG 22108 29 100.0 35 ............................. CTTAAAGGTTCGTATTCTTTATTTTCCTTAATTAA 22044 29 100.0 37 ............................. GTATGAATAGTTGTATAAGGAATATCGGATTCGTGCG 21978 29 100.0 35 ............................. GCTATAGCAACTTTTGGATCAGCGATAATATGCGC 21914 29 100.0 37 ............................. TTTTGGATTTTAGGATATCTTGTATTAAAAGCCCCTT 21848 29 100.0 36 ............................. GTATCCTGTTGTGGGCTTTCTATAGTACTTGTAGTT 21783 29 93.1 0 ...A........................A | ========== ====== ====== ====== ============================= ===================================== ================== 8 29 99.1 36 GTTTTATCTAAACGTAGTGGGATATAAAC # Left flank : AACAACTAAAGCTAACAGTTTACGTTTCATACTCACCTACCCCTTTGTTTGTTTATCTGTTGCTTAATCTTTTTCATTTCTTTATGACCTTTATCTATTAGCTTAGAAGCGGTTATTAATTCATCACTCGCTATTTCTACACTTACTTTATCTCCCATAGATAAACCAGTTTGCATATGCTCTACTCTTGCCTTAACATATGTCATTGCTTCATCTACTTCCTTCTGTACAAGATAATACTTTTGGTCATACGTTTCTTTTTTGTACATTTGTTTATTTCTTTAGGTTTTTAGATGTGTTACGTTTATATTGTAGTAATAACTAACTTTGCAGCGCATCTTAATAATTACGTAACATGCTAAATCTCTTGTGATTCATGGGATTAACATAATTTATGAAAATATTTATGAAACAAGACTGGCGGTCCACTGCAAAATTTGCAAACTAGTATCAATTAGATTCCTTGCTGTACAAAGATTCTATCACACTTTTTATGAGGG # Right flank : TATTTTATTATCGTAGCATTAAAAGTTTATCTGAACGTAGTGGTCAAATGTATATTATGAGTGATCCCCCCTGAGATGGTTATTGTAATCTAGGGGGACTTTTTCTTTTTTAGAATCAATACAAATATTAACATGGAATATTTTTCATTTTACACTATAATTAAATATGGTTAGGAGGTTACAATAATGTCAAAGGTCTCAAACTCCCTTCGTATTCTTTTATTGCTTTCAAAAAATAGAAAGATGTCCGGGGGGCAATTAGCAGGAATGCTAGAACTGAGTGGAAGAAGTGTTCGCAAGCATATAAATGATTTGTTAATGGCGGGTTTTATGATACATACGATCAGAGGACGAAACGGTGGTTATTTCTTAGAAACAAACCCTCTTTGGAACAGCTTTTTAGAGCAAAAAGAATTAGATAAGTTGACTGAACTAGTCCGTAAGCAACTAACACTTAATCCGTATGATAAAGTTGTCCAACAATTAGAAGAAAAACTAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTAAACGTAGTGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //