Array 1 15934-18010 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS995684.1 [Clostridium] hiranonis DSM 13275 Scfld2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 15934 30 100.0 36 .............................. TTGGTAATTTAGATTCCGTTAATGCCGAGTTAGATG 16000 30 100.0 35 .............................. GGTGGAGCAGCTGCAGACGTCGATAAACAAAGCAG 16065 30 100.0 36 .............................. GATATAAATTAACTATTGAAGATTGGGCATCTTATA 16131 30 100.0 37 .............................. TTAAGTAAATTTATGAATATAACAGATGTTAAAGAGG 16198 30 100.0 36 .............................. TAGAATTCTTTTACTTCTGGCATCATCTCTGAACGC 16264 30 100.0 36 .............................. AATAAATGTTATGAAGTCACAAAAATGGGCTGCGAA 16330 30 100.0 36 .............................. TAAGAATCACCGAAAATATACTTAGCCTGTTCTGGA 16396 30 100.0 36 .............................. ATAGATGTTGGGATAAATCTGTATAGAATATCACAG 16462 30 100.0 36 .............................. GTTCTACCATTCGCCATTCATTCCACCTCCAATCTT 16528 30 100.0 37 .............................. TGGATCTTATCGTGATATGAACGCTTTTGATTTCTAT 16595 30 100.0 36 .............................. TCTACTGCGGTATTGCTATTTCCAAAGATTACAACT 16661 30 100.0 35 .............................. CTTAAGAACACTGATGCTAGGGAGTTTAGAGCTAT 16726 30 100.0 37 .............................. TCGCTTTTGGCTTCATTTCTGCATTTTCTATTTCTAA 16793 30 100.0 36 .............................. AAGCTTTAGTAGTGGTTATTTGACTAAAACTGCACA 16859 30 100.0 35 .............................. CACACACCTTCTAACCGAAAAGCTGGAATAGAAGG 16924 30 100.0 37 .............................. TCTCCATCAGGATATAGTTATAAACATAAACATATAG 16991 30 100.0 35 .............................. AAATGAAATTAGTAGAAATATTATAATAACTATAC 17056 30 100.0 36 .............................. GCAATAGTACTAGGTATAAGAAAGTGGACTAGAGAA 17122 30 100.0 36 .............................. CGTGTGGAGGACATCCTAACTCTAGCAAAGGTCCAT 17188 30 100.0 35 .............................. GCTTTATACAGATCATGAAAGAATGATTTATAAAT 17253 30 100.0 35 .............................. GAAAATAAATCAAGAAATAGAAGCATTAAAAGCTC 17318 30 100.0 37 .............................. AAAAATTTTCCAGATGATGATATTGCTAGAAGAAGTA 17385 30 100.0 36 .............................. TAGAAAAAGGAGTTACAGTGCTAAAAGTTAGCTTTG 17451 30 100.0 36 .............................. TTTAAAGAATTTATTTCAATATTATAATCATTCAAT 17517 30 100.0 36 .............................. TTCAGACTTAATCCTGCTTCTACTAATTTGTCCTGT 17583 30 100.0 36 .............................. TTATGTTGCTATAAAGAAAACATTCAAAATGAACGA 17649 30 100.0 37 .............................. TCAGTCCATACAGGTGCATCACTTAATCCAGAAACAT 17716 30 100.0 36 .............................. GTAAATACTCCAACCACTGCCATTATTATAGTTACT 17782 30 100.0 36 .............................. GATACAGATAGGAAGCTTTCCCTTCTAGCTATACCT 17848 30 100.0 37 .............................. AATTCAGGTTTTGCATAAATTGATACATTAACTTTGT 17915 30 93.3 36 ..G.........T................. ATAACTGCCTGCTTGTTATGTGAATTAGCTAAAAGA 17981 30 90.0 0 ..G.........................TG | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 99.5 36 GCTTATTAATAACATTTGATGTATTTAAAT # Left flank : ATTGGATTGTTACAAATTAATAAAATACATTCTTGAAGATAAGGAATTTGTTCCTTTTTCAGCTAAAGAAGGTGTTTAGTAATGAAGAATAAAAACTATAATTATGCATTCTTATTTTATGATGTAGGTGAGAAAAGAGTTCGGAAGGTATTTAAGATTTGTAAAAAGTATCTAGTACATTATCAGAATTCCGTATTTAGAGGGGATATAACACCTTCAAAGATTATTAGTTTAAAATCTGAATTAAAAAAAGTTGTAAATGAAGATGATTTTATATGTATTATAAAAATGATGAATGATTCTTGTTTTGAAGAGGATGTTATAGGCGAAAAAAGATATAAGGATGATGAGTTGATTCTATAAATATCCCAGCGATCTTTAGGAATTGTGTATATTTCAGTCTTTGAATAATTTTTAAATCGTTGGGAAATAAGATAGGAAATGGGAAAATTCAATAGTTTTATGATATAATAATTTTTAAGAGTATTAATTTTACTATG # Right flank : GATAATTAGATAAATATAAAGTAAACCATATTGACAAAAATAAAAACTCCTTCTAACATAAAAATAAACAAACGAAAAACAAGGAGTTGAAATAATGGGCTTTCAGACCATAACAGAAGTAATAGAACAAAACATCCAAAACGGAATCAAAAAAACAAACCTAACAACAAAAAAACTAATCCTACTTGGAATAGCAGCGGGATTTTTCATAGGAATCGGTGCAGAAGCAAGTAGCCTTGCAATGCATGGAATATCAAACGTGGGACTAGCAAGAACAGTAGCTGGAGCAGTATTCCCAATAGGTCTAATGCTAATCGTACTACTAGGTGGAGAACTATTCACAGGAAACTGCCTAATATCAATGGCAGTATACGACAAAAAAGCAAAACTAAAAGGAATGATCAGAAACCTGACAATAGTCTACATAAGTAACTTCATTGGAGCAGCACTAATGGCATGGATGATAAATAACTGTGGTCAGCTAAACTTTAGCGATGGTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTATTAATAACATTTGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 756798-757492 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS995356.1 [Clostridium] hiranonis DSM 13275 Scfld3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 756798 30 100.0 36 .............................. ATGATGGAATAGAAAAGGATGCAATGAGATTGATGC 756864 30 100.0 36 .............................. ATTATATTATTTTTAAGAGTTACAGTTTCTGGTTTA 756930 30 100.0 38 .............................. GCATCTGTTGTTCTGCAGCTTTTTGTTCTTCTTCTGTC 756998 30 100.0 36 .............................. AAGTAATTGAAAAACTCAAAGAAGTGTTTAACGTTG 757064 30 100.0 36 .............................. TTAAAACAGTAAAGCCACGCATTATTTCGGGTCCCA 757130 30 100.0 37 .............................. TTTGATAATCGTCGAACTTATCATCAGCATAGGTTGA 757197 30 100.0 36 .............................. ATAGATATTAGCAAAATTAAAAATAAAGATGATATG 757263 30 100.0 38 .............................. TAGAGATTATATCGAGCAAGATAGACAAAGATATGAGG 757331 30 100.0 36 .............................. CATCTTGTATTCGATACAAATAGAAGAATGGATATC 757397 30 100.0 36 .............................. GTTATAGAAAACTGTAATAAAGTTATAATGAAAGTC 757463 30 96.7 0 .................C............ | ========== ====== ====== ====== ============================== ====================================== ================== 11 30 99.7 37 ATTTGATTAGAACCATATTGGAATGTAAAT # Left flank : ACATCTCAAAAATGTAGTAAGTGTGGGTATATAGATAAAGAAAATAGACCTACTCAGGAAAAATTTAAATGTATTAAATGTGGTTTTGAGCTTAATGCGGATCATAATGCAGCTATCAATATTTCAAGATTGGAAGAATAATATTTATATAATTTTTAAATAATAATGGTTCTATAGGCGATTTAGCGTCTAAAGGTTGAGGGATAAGACAAAATGGTTAAGGTTTCGACCAACTAACTACTTATCCACTCGATAAACGGTAAAAACTCATACTAATATTCTTTATAGATAACGTGGTATGACATTCCAAGAATTATATAAATTGTCGACCTTAGATAATGTAAAATACCTAGGAGATAGACAAAATGAGATATTGCAATAGTTGGATCTGTTTTTTATCAAGAAGGACTATTTTTTACTTTAGAAAATATATGTTTATTTGTAGGTAGACAAATAGTATATCTGTATATGTTGCAATTGCTAGGTTTAATATATAACGT # Right flank : TTATGTATTGCATATTGTTGACCAAGGTCCTATTGAATCTGACTAGAACTATTTTATGACAATTATGCAAATTAATATTTTTTAGCCAAGAAAACCAACATACGAAAGTTTTCTTGGCTATTATTTTAAATACTATTCCCTAGACTGCATTTGTTCTATTAATGACTGTTGTCTATATTTTCTAATTGACCAAGTTGCCAAAACAAACTCTAAGATAAATAGAACTAATACGAATAATCCCATATCAAATATAGGGAACTGATAAGGAAGTACTCTACCTGCAAAAGCTGCAGTACTTACTTTTCTACATGCGACTATAGAAATAGGAGTACCGACAATCACCGTAACAATTGTTGCAGCAAACAAGTAACATAGACCTTCAGTTACATACATTTTGTAAAGTTGTTTTTCAGTTAAACCTATAGAACGTAAAATACTATTTTCTACCTTCCTAGATATTTGATTAGATAAAGTTGTATTAATTAGATTAATAACACCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGATTAGAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //