Array 1 118074-114862 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEMF010000013.1 Acinetobacter baumannii strain MRSN59 MRSN59_contig00013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 118073 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 118013 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 117953 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 117893 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 117833 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 117773 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 117713 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 117653 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 117593 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 117533 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 117473 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 117413 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 117353 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 117293 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 117233 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 117173 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 117113 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 117053 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 116993 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 116933 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 116873 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 116813 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 116753 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 116693 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 116633 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 116573 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 116513 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 116453 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 116393 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 116333 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 116273 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 116213 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 116153 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 116093 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 116033 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 115973 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 115913 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 115852 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 115792 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 115732 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 115672 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 115612 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 115552 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 115492 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 115432 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 115371 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 115311 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 115251 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 115191 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 115131 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 115071 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 115011 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 114951 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 114891 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //