Array 1 36706-39118 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHPO01000022.1 Bifidobacterium longum subsp. longum strain MCC10004 contig0022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 36706 36 100.0 28 .................................... TTAAGCCGATTGAGGAGGAGTTGGGGCC 36770 36 100.0 28 .................................... GGGCTTATAGGTGATATTAGTGCCATTC 36834 36 100.0 28 .................................... CCATCCATAGTGTCAGTGTTGAAGAAAT 36898 36 100.0 28 .................................... GAGATAACGCCAATACCCTTATCAGTGA 36962 36 100.0 29 .................................... GAACCTGTTGGCCTGGTCCCAGTCGCTCG 37027 36 100.0 28 .................................... ATGACCAAGCTCGTTTGCATGTACAACG 37091 36 100.0 28 .................................... TCGGCGCATCGGGGCTGCCCACCCCCAC 37155 36 100.0 28 .................................... ATTGATAGCATGCCGTTTGTCGCTATTG 37219 36 100.0 28 .................................... TGTCGCTCACACTCTTGTCTCCTTTCGA 37283 36 100.0 28 .................................... TCATCAATCTCACAAACCGACTCATTAA 37347 36 100.0 28 .................................... CCAGCGTGGTTGCAGTCACTGGCGATAC 37411 36 100.0 29 .................................... GTGAGGGACACCTTCATCCGCATACTGCA 37476 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 37541 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 37605 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 37669 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 37733 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 37797 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 37861 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 37925 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 37989 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 38053 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 38117 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 38182 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 38246 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 38311 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 38375 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 38439 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 38503 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 38568 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 38633 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 38698 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 38762 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 38827 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 38891 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 38955 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 39019 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 39083 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 38 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //