Array 1 28772-28011 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZI01000010.1 Chimaeribacter arupi strain 2016-Iso3 NODE_10_length_136658_cov_22.8145_ID_7566, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 28771 29 100.0 32 ............................. TCGATTTATTAAACGAAATTTTAGTAACTTAT 28710 29 100.0 32 ............................. ACTCACGTCCGCAACCTGGAAGGGCTGGCAAA 28649 29 100.0 32 ............................. CGTACATTTTGTCAGTGGACGCCGTTGACTAT 28588 29 100.0 32 ............................. CCGCCGTAGCCGGTGTTCCAGTTATAGCGGCC 28527 29 100.0 32 ............................. TACTTTGACCGCCAGGCATATTCCCTCGTTTA 28466 29 100.0 32 ............................. GTTTTCACATACCCATGCACGCGATACAGCAC 28405 29 100.0 32 ............................. ATTAAATATCAACTCCGTTCAATTGATGAATT 28344 29 100.0 32 ............................. TGTATTTTTCTACAAAATCATCCAATTCTTTT 28283 29 100.0 32 ............................. GCGCACGGGCCGGAGATGCGGGCAAATGTTCG 28222 29 100.0 32 ............................. TGCTGGCAGATATCCGATCGGGGCTGGATGAG 28161 29 100.0 32 ............................. CAAAACAGCGGAAATTTCTGGACGCTGGAGCC 28100 29 100.0 32 ............................. GCGTACTACTTGGAAGCCCTGCCGGATACGGA 28039 29 82.8 0 .....................A..T.GAC | ========== ====== ====== ====== ============================= ================================ ================== 13 29 98.7 32 GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Left flank : AGCGTTCCGGCGGTGATCGCCGTGAGCCGTGAGCCGCTGATTGTCTACTCCGCGATGATGTTCGCCATCCTCGGCCTGCGCGCGCTCTACTTTGTGCTGGAAGCGCTGCGCCGCTATCTGTCGCACCTGGAGAAAGCGGTAGTGGTGTTGCTGTTCTTTATCGCCTTCAAACTCGGCCTGAACGCCAGCGACCACCTCTGGCACCACGGTTACGAGATCGGCATCAACACCAGCCTCTATATCGTACTGATTGTGCTGGGCCTCGGCATCCTCGCCAGCGTGCTGTTCCCTGCTAAAGAGAAATAATTCTCTCAGCAATCCTGAAAAAACCCCGGCTTGCCGGGGTTTTTCTTTTTCCGGCTGGTGAATACCATAAAACGCATTCTGAATTTTATAACGTTCTGAAGAATCAATGATTTATATCGCATAATCATCGTAAAAAAATCGGTAGAATTTTAGCTGTTTAAAAAAGTTTTTATAATCAAAGAAATACGATAAGA # Right flank : TATGACTGATCCTGTAATATTGTAGTAATCCAATATGAGAACGCTGTCTAAACGCCTGATATACACATTATATAATGTGACTATTATTTTAATTCAATGTTATTGATTTAATCATTCCCTGTTTTATTTATTTTTCATGACTATGTTTATCCCCATGTTTATTGATTTTTAGTATTTGTTATTGGCTTTTATCAGGCGCAAACTATGCAAGCTTTTCTAATCAATTAGGAGTTTAATAATGGCTATCCCTCCCTATTTATGGTTAAAAGATGATGGTGGTGCACTAATTAAAGGGTTGGTTGACGTGCGTGGCCGGGAAAACAGTATTGAAGTGCTAAGCTTTATGCATGGAGTGGACATTCCTACCGATGGGCACACAGGTCAAATAACCGGGCCGCGAATTCATGATGCATTAGAATTTGAAAAAGAAATTGATAGTTCAAGCCCATTGCTTTATAAAGCATCAACCACCGGTCAAACACTAAAAAGTGCTGAGTTTA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-12.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 120923-119035 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZI01000007.1 Chimaeribacter arupi strain 2016-Iso3 NODE_7_length_142926_cov_24.255_ID_7560, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 120922 28 100.0 32 ............................ ATCACCGGCACCCCCGGGAAGGTGCTGGAAAC 120862 28 100.0 32 ............................ ACGCTGCAAGTTTTTCGTGATAGGCGCTCAGT 120802 28 100.0 32 ............................ TAACTCCTCCAGTTCGATGGCGGTTTTGTTCT 120742 28 100.0 32 ............................ TGCCAGTTGAAGTTAAGCCCCTGCCAGTGATA 120682 28 100.0 32 ............................ AATGGCCACGTTGAGTACACCGCTGACTACGT 120622 28 100.0 32 ............................ AACTCCTCAAAATCCTGCAACTCCTGCGTACA 120562 28 100.0 32 ............................ AATAAATGCCAAGCGTCAGGCGGCATGTCTGG 120502 28 100.0 32 ............................ TGAAGCGCGCCACCTCCACCGTGGCGCAGCAT 120442 28 100.0 32 ............................ AGAACGGATCGCCGTTTGTGATCGGCACGTTC 120382 28 100.0 32 ............................ ACAAGGGATTGATATTGTATCGACCAGGTTGC 120322 28 100.0 32 ............................ TGGACGTTAAAACAGCGACTATCGGTGGTATT 120262 28 100.0 32 ............................ TCACACGTGGGTGTATACCAACGATGACCCCA 120202 28 100.0 33 ............................ AGCTGCTTGTGCTGCTGCTGCCGCTTGTGTCGC 120141 28 100.0 32 ............................ AATATTGAGGCGATGACGCGAGAGGCCAGGGG 120081 28 100.0 32 ............................ ATATGTCGCCAGAAGAGATTCGCGGGCTGTCT 120021 28 100.0 32 ............................ TTAGTAGGGAATTTCCTCCTCGTCGATAGACA 119961 28 100.0 32 ............................ TGTCAAAATACATGGTTTCGCGGGTTACACCG 119901 28 100.0 32 ............................ TGATTACGCCAGAGTTACACACACAAACGCGT 119841 28 89.3 32 ...T.......TG............... TGCGCATTCCTGAGGGCTTCAGGGCAGCCGAA 119781 28 92.9 32 ...........TG............... TGTTGTCGGCAGACAACGCGGATTTCGCCTAG 119721 28 100.0 32 ............................ ATGAACCCGTAACGGCGTGGTGCGCGATTGAA 119661 28 96.4 32 ...........T................ GGCGGGCAGATCTGCACGCTATTGCCGTTCAC 119601 28 96.4 32 ...........T................ TAGACTGGAGGCCATATGGCTACGTTCGATTT 119541 28 92.9 32 ..........AT................ GCTGAAAATGGGGTTTTTTGGAGAGGGACAAA 119481 28 96.4 32 ...........T................ GTAATCAGCAAAATTTCATCTATCTCTGGCTC 119421 28 100.0 32 ............................ TTGAACGTGCGCGCCATCAGGAAAAAAACGGC 119361 28 100.0 32 ............................ TAACATGGAGGATGTAATCCTTAATGGAATGT 119301 28 100.0 32 ............................ CAAAGGACAGGAAATTTACGGCTACTGCAATG 119241 28 100.0 32 ............................ TGGGCGGCCTCCGGTGAACTCGCGCCCCATTA 119181 28 100.0 32 ............................ GTGTTTGTTGCCAAATCATCAGCGCTGTCATC 119121 28 100.0 32 ............................ GTAACGTCCCCGATAAATTTGCCTGTGGATCT 119061 27 92.9 0 ............C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 32 28 98.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGCATTGCATACGCTGGAGTCTTTGCACTGGCGTACCGGCCTTAGCGATTACTGCGCTGTTTCAGCGATCACACAGGTCAGCGTAATCAAAGGGTGGCGCGCGGTAAGCCGGGTGCAGGTGAAAAGCAGTGCCGGGCGCTTACTGCGGCGCTCAGTGAAGAAAGGCTGGATCAGTGAAGCAGAGGCGACACAGCGGCTTGAAAACAGTCAGGAACAGCGAAGCGACTTGCCCTGGCTGGCCGTAAAAAGCCTTTCCAGCGGTCACCACTTCCGGCTGTTTATCCGCCACGGTGAACTTCAGCCCGCCGCCACCGCAGGGGAGTTTAGCTGTTACGGCCTGAGCAACACCGCCACCATCCCCTGGTTCTGACCCTTTTATTTCCGTCAAGGATAAGTTGTTGATTTATTGAGACCTAAATATGAGGTAAGAAAAAAGGGGTAAGGAAGAGAATTAAAAGGATTTTTACGCAATAACAAAACGTTACGAAGCTGGCTGACCA # Right flank : GGTTGAAGGCGGCTTGATGGAGAGTTCAGACGCAGAAAAGCAAAAACCCAGCCATTGGCTGGGTTTTCTGAATAATTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTATTGGCTGAAGGCCGTCAACGGCTTTATGCAGAATTCTCCCTGAAACCGGGCTGACTGCTCTCTTTTCAGGCAAAAAGCAGCAGGGCAGCAGCAAAAACTGCCCCTGACAGGCGATGTTTATCAGGTCAGCGCACCATGTTTACGGCAGCGTGCGACCTGCAAAACATCCTCAGCCAGCCGTAATGCGACTTCCACATCATGGGGCTGCCGTTTTACCAGCAATTTGCTCAGGCACCCTTCCAGAATCAGCTCCATCTGCTCGGCCACCATCGGCGCATCGTCTGCGTCCATGTCCTGCAACAGCGCCAGCGTATAGTCATAAGAGGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //