Array 1 166720-165878 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPRB01000001.1 Brevibacillus borstelensis cifa_chp40 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 166719 36 100.0 35 .................................... TTTGCGATCAATATAATTCTTAATGTATTTTAAAC 166648 36 100.0 36 .................................... AAGTAACCGCCTAACACCGTGGTTACCGGGATGATT 166576 36 100.0 38 .................................... TTGGCGATCCCATAGCGCTCCTGCAACGGTCGCGTCGG 166502 36 100.0 39 .................................... GTCTCGATGTACCCGAGAAATTCTTTGTAGTCGTCTCCG 166427 36 100.0 37 .................................... AAAGCATGATCAGCCATCAAATCGGTTTCTTCCCTCA 166354 36 100.0 37 .................................... GCCAAAAGATACTTCGTATGGCTCCTCTTCAACGTAC 166281 36 100.0 35 .................................... ATGGGAAGCAGGCTTTCTTTTATCTTTTAGAAACA 166210 36 100.0 36 .................................... GCGATCATGATCGGGATTGCTCTAATCCCTCGTATC 166138 36 100.0 39 .................................... GAGATAGAGCGATTGATTGATAACGCGAACCATCATGCT 166063 36 100.0 37 .................................... CTCATGAACCTTTCGCCAAAAACGAAGAAAGCCACCG 165990 35 97.2 39 ........................-........... TACATCTGCTGTCTCCTCCAAACGGTAAAACTTAATCTC 165916 36 100.0 0 .................................... | CT,T [165881,165885] ========== ====== ====== ====== ==================================== ======================================= ================== 12 36 99.8 37 CTGAAAGTAGCTGTGATGCTGAAAAGCGTTTAGCAC # Left flank : TGGGGATTGCTGTTGGAATATTCTTTTTCATCCTCTTCAAATACATGTTTACTAAAAATAGAACTACTTTACGGTATAAAGTTTGGGAGTATGTTATTCTTGTGATTGTCATTTGGGTGTTAAAATCACTTTTTAATATTTTCCTCTAATAGGTTGAACAATAGTAAGAAACCCTCAAAAAGGAGTTTGCGTTCTAATTTAGGGGATTGGACACGCTCCACCCTCGTAGTGGTGAACATTGTAATTCGATTCAAGTACCAAGGTCATTCTTGAAACAGAACCTGAAAAAAGTATGATGAGGCCGTTACTGACAGGGTTTGGACGATTATCCTGTTTAGGTAGGTGCTTGAAAATTAGGAGGAATACTGGTAAATCAATAAGTATGGGTATTGCATTCCTATAAAAGAAAGGGCCTTTTGTAAAAAGTGAACCGCTTCGTCAGAGGTGCTTGAAATGAAGGGCGTCTTTCCCATATGTATCAAGGGTTTTTTGTGGAGGCT # Right flank : TGTCCATAAAGCTAAGGCGTGGCCCTGCAGCCAACAGCGGCTAGAAAGCCACGCCATGTACATGCCAATATTAGTAATTCCGCCCCATACGCTCAGCAGACGCTCTCCAAAACATCACCCCAACAAACCCGCCACATCCCCAACCCGAACAACCCCGGTTTCAACCACAGCCGCATACACTCCAAAGCAAGCCTCCCGACTCGTCGCAAGCGTCTTCAACAAGCTAGGGTCAATCGAGTAATCCCCCGGATCAATATTGACCATCGAGCAGCGCTTGCACTTTTTGTACACTTCCACGACTACCTCGCCAATCTGAATCCGCCGCCCGATCCAGTCCTCCTCGGCAAATGGCACTCCATCTGCTTGCTCCAAGACGATATTAGGCCTGAAACGAAGGGGGTCCACCGGTTTTCCCCACATCTGCTCCAATGCCCGTACGGAAGCGTCTGTCACGATCAGTAGCTGCGCCTGATCGACGCCCATCAGCTCATCCTGCGGCG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAAAGTAGCTGTGATGCTGAAAAGCGTTTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 174493-173132 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPRB01000001.1 Brevibacillus borstelensis cifa_chp40 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 174492 36 100.0 38 .................................... TTTGAGGTGCATTACAACAGTGAATATGACTTCTTCAC 174418 36 100.0 35 .................................... GGAGACAGTCGTTTCATGTTGTGTGAAGCTCATTT 174347 36 100.0 35 .................................... AGGTTCGATTCGAGCAAGGGTGTCCTGGGGATGGT 174276 36 100.0 38 .................................... ATGTTGTACCCCTTTACATCCTGCTGCGGACACCTGGC 174202 36 100.0 40 .................................... AAAGACATGTTTCTCGCGGAAGGGTACGGACAGGCCGTCG 174126 36 100.0 34 .................................... GCCTACACGCTTAATCTGATGTGCGATCAGAAGC 174056 36 100.0 37 .................................... CTTTCCAAGTCAGCAAGCACCGTGTCGAGACCCAATG 173983 36 100.0 40 .................................... TTTATATCTCCGATGTTGTTGGAACAAAGAGACAAACCGT 173907 36 100.0 38 .................................... GAGAAGGTTACTATATTATCCGTCCGGCGTTGAAAGAA 173833 36 100.0 41 .................................... CACTTGTAAGTCATGACCAGCGATTCGTACGTCTTCCATGG 173756 36 100.0 38 .................................... TATAGGCCAACCGTCAAACTTATCATCAACCGAGGGTC 173682 36 100.0 42 .................................... AGCTGCAAAGCCGGTAACGGCCAGTCCGCCCACATAAGCTCC 173604 36 100.0 38 .................................... GCGGCAGTTTAGCGGATGGCACAGGTACATATGATCTG 173530 36 100.0 37 .................................... TACAACCATTACATCGAGAAGCTTGGCCCCGTTCAGT 173457 36 100.0 34 .................................... GGACGGGCCCGGAGAATAAGTTCCAGGCCCTTCA 173387 36 100.0 39 .................................... AGAAGGCTGTATTGCGCGGTGTAGAGCAGCCAGTAAAGC 173312 36 100.0 36 .................................... AGTAACTTTAAGCTGGGATGCCGCAAACGCCCAATA 173240 36 100.0 37 .................................... TGGGTCATATGCCGTTGAAGGCTTCGTTGCCTTATTC 173167 36 97.2 0 .................................T.. | ========== ====== ====== ====== ==================================== ========================================== ================== 19 36 99.9 38 CTGAAAGTAGCTGTGATGCTGAAAAGCGTTTAGCAC # Left flank : AGCGGTGGAAGAAGTGTTTTCGACTCGTGAAGGGTTACGGAGAGAGAATCCAGTACTCGGTTTTTCAATGCTATTTATCTGAACGTGCCATGGCTCAGCTTCGCTGGGAGTTGGCCAAAATCCTGTCAAAGGAAGACAGCTTGTTGATTGCCCCGATTTATGCTCCTGACCAGAATAAAATCATACAGTGGAACATGAGCGCCGAATGGAGTCCGGATCGGGAGCGGTTCAAAACGTTGTAAGTCGTTTCAAGCACCAGGGACATTTTTAAGACTGAACCCGAAAAAAGCTTGATGAAGGCCGTTCATGACAGGGTTTGGGCCAATATCCTGTTTAAGCAGGTGCTTGAAAATCGGGAGGAATACTGGTAAATCAATAGGTATGGGGATTGTATTCCTGTGGAAGAAAGGGGCCTTTTGTAAAAAGTGAACTGCTTTGCCAGAGGTGCTTGAAATGAAGGGCGTCTTTCCCATGTGTATCAAGGGTTATTTGCGGAGGCT # Right flank : CTGCCCCAATTAATCTCTCTGGTCACACTTATTAAGGGAACTTGTGGAACTCCGGCATGAAAAAGGGGAAGGACTTGTTACTTCGGATGTCAACACCAAACTAGGAAGTTTTCTTAAGTGCCTGCTCTTTGTAGGCTAATGGGCTGAGATAACCCAATATCGAGTGAATTCTTGTTTCGTTAAACCACTTGGCGTATTTTCCTAGTTTCTAGCTTCAACTATGTCAGCGACTCAAACTATCGATTCTTTACGAACTCTGCTTTGATCAGCTTAAAGGTTGCTTCCGCAACTGTATTGTCATAGGGGCAGCCCTTCATACTCAATGAACGCTTGATCTTGAACGTGTTGATTACTTCATTAATTGTACGATTTTTAAACTGACTTCCACGATCAGTGTGAAAAAGCTAGATTTGGCGTAGATCTCCTTTTACACTTGCAAATACTTCATAGACTAGTGCGGCTTGAATTTTCTGCAGCCGTGACCGATTAAACAAGTAACG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAAAGTAGCTGTGATGCTGAAAAGCGTTTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //