Array 1 145902-146053 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOII01000012.1 Streptomyces albidoflavus strain NRRL B-1271 contig12.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 145902 30 100.0 31 .............................. GGCGGCACTGTCGATCGGACCGAGCCCAAAT 145963 30 96.7 31 ..............T............... AGTGGAACGGCTGATCGCACCGAACCAACTC 146024 30 96.7 0 ..........................A... | ========== ====== ====== ====== ============================== =============================== ================== 3 30 97.8 32 CAGCCCGGCCGGCGCTTGAGGCCATCGGTA # Left flank : GAATGCCCGACCACCACCGGAGCCACCCCGAACCCGTCCACCGCCTCCTGCACCACCCGCGTGTCCTCCCGCAACGACCCCCGATGCAACTCCGGAACCACCCCCTCCCCCCCCCCCCGCCGCAACCCCGCAGCCACCACCCCAAAATGCCCCGCCTGGTGATAGAGCCCATGCACCAACACGACCCCACCCATACGTCCCCCCGCCTGGTCCTGAATTCAGGACCACTCGCCCCTTGGTCGCTGCGTTCAGGGTCACTGACCCCCTAGTTCTGCGTTCAGAGTCCGGCCCTGAGTTCAGGGTCCCCCCGTCCTGGCCCTGCTTCCACAACCCGCCTGGCTGGTCCTGCACAGACGGTCCGCTCTCCCTGCTCCGATTCCAGCAACGGCCTACTCCCTCCCGAACTCACCGCCCACCTCTCTCGCTCCGGCCCCCTGCCCCCGGGCCCACGGCCCCGCCCCTGCTCAGCGGCCACCTTCCGATCCAACGGACACCAATCC # Right flank : AAGCGGCACCCCCAGCCCCAGAGGCCGCCGCCAGGCAGACGCACCCACACCTGAAGCCACACCCCACCTCCCCACCGGTAGGCTCTGATCAAGCGGGCCGCAAGCCCACCTCACCGCCCCGAAGGGAACCCCCATGGCACTCGAAGCCGGCCTCCTGGAAATCCTCGCCTGCCCGGCGTGCCACGCCCCCCTTGAGGAGTCGAAGACCGACTCGACCCCGGAACTCCTGTGCACCGGCGAGGGCTGCGCCCTCGCTTACCCGATCCGCGACGGCATCCCCGTCCTCCTCGTCGACGAGGCCCGCCGCCCCGCCTGACCAGGGCGGACAGGCGTACCCGCACGCGCGGCACGCGAACCCCGCCCGGGGCGGACCAGGCGTACCCGCACCCACGGAACGCGAGCCCCCGCCTGACCAGGGCGAACCAGGCGTACCCCGCGGACGCGAGCCCCGTACGAGGCGCGACCGAGCCTCGCGGAGGTAGCCCGCCCCACCCCGGGGC # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCATCGGTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 145486-145759 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOII01000001.1 Streptomyces albidoflavus strain NRRL B-1271 contig1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 145486 30 96.7 31 .............................A AGGTGAAGGAGGGGGCCTCGTGGCTCGGCGA 145547 30 96.7 31 .............................T CGTCCCAGGTGATCGCCATGGGTGCGAACGG 145608 30 100.0 31 .............................. GCGTCAACATCTGCGACCTCGACCCCAACTG 145669 30 96.7 31 .........................C.... AGGCCGCTCCGGTCGTCACGAACATCATCGA 145730 30 80.0 0 ..............G......CAA.C...A | ========== ====== ====== ====== ============================== =============================== ================== 5 30 94.0 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : AAGCACCACACCCCGCAGCCCGCTACGCCACCGGCAAAGTCCGATACCAGGCGAACTGCTCGTGAGTGGGCATCCAGTGCTGGCCGCACCTGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGGAGGTAGGTCGTGTCCTTCCAGAGCCGGCCATGGATGTCCGTGTGGCAGGCCCGGTCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGTGGGGCCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGGTGCGTGGGGGGGCCGGGGTCTGCTCCGCCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGAACTCACGGCGAGGTGGGCATTTTGGGGCGAATATCGCTATCGGCGAAGCTTGCAGAAACTGAGGCAGGGGCGCCGTAAACCTGCTGGTCAGGGAGA # Right flank : ACCCCGCCTCACCCCGACCCGGCGCACAGCGCCGCCACCCGCCTTGCTCCCCCCACCCCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCGGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCCACGCGGGAGAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTGCCCAGCGGGAGTGCGCGCGGGCTGGCGAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCGTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGGC # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 41272-41000 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOII01000042.1 Streptomyces albidoflavus strain NRRL B-1271 contig42.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 41271 27 100.0 34 ........................... CCAGTTGGCACCGCCGCACGATGATCACAACCCA 41210 27 100.0 34 ........................... CCGCCGAGGGGTTGTGGATGAGGCCGCCGCGCTG 41149 27 100.0 34 ........................... CCTTCGGGCTCGCCACCTCGACCGCGAGCACAGT 41088 27 100.0 34 ........................... CCTCGTCGAGGGTGGCGTTCAGGACCGTGACGAT 41027 27 100.0 0 ........................... | T [41001] ========== ====== ====== ====== =========================== ================================== ================== 5 27 100.0 34 CTGCTCCCCGCGCGTGCGGGGTTGGTC # Left flank : GGGGGGTTGGGTCGGGTGAGGCTGAGGAGTGGGGTCGGGGTGTGAGTGGCTGGAAGGGAGGGGTTCGCGGGAGATCTGTCGGGTTCAATGGGGGGCGGGTGCTGGGTGGACACCATGTAGGGGGTATGAGGCATTCACCCGCATTGCCGGAATCTTTGAAGCTTGCGCTAGAGAGTGACTGGGCTGAGTGAAACCCCAGGTCAGCGAG # Right flank : CCTCCCGGCAGCCGCCGCTCCCCGCCCACGCCTAGGTCGACGCGGTGCCCCGGCTCCCCATCGCCGAAGGCTCCCCCAGCCCCGCCGCCAGTTCCCCGTACAAGGCCGACTCACGAAGGAGCGAGGCGTGGGTCCCCAGGTATGGGGTCGCCCCGTCCAAGAGCAGGACGCGTTGCCCAGGTTCAGGCGCCGGAAAGTGGTGGCTCACTGTGATGACCGTGGCCGGGTGGGAAGCGAAGGCCAGCTCGGTCGCAGCCCGTGCCCCTGCGTCCAGGTGGGCCGTGGGCTCGTCCAGGAGGAGCAGGGGCGTAGGTGTCAGCCAAGCCCGTGCCAAAGCGATGCGGCGGCGTTCGGACGGGGTGAGGTGGTCCGGGCGGAGAGGGCGGGCGGGGTCAGCGGCGAGGGGGGCCAGGGTGAAGGTGTCGATGGCTTCCGTGATGCGAGGGGCCGGGGCGTCCGGGGTGAGGTAGGTGAGGTTGTCGTGGAGAGGGGCCTCGAAG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGTTGGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGTTGGTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3175-2964 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOII01000047.1 Streptomyces albidoflavus strain NRRL B-1271 contig47.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3174 28 96.4 33 ............C............... CGACCGCGCCTGGGCGGCCGGGGCGATCCTGGT 3113 28 100.0 33 ............................ CAGGTTGAACCGGGCGGTCTCCGGAGAGACCTC 3052 28 100.0 33 ............................ CCCGGAGCAGTGCGCGAGGAGCGCGGCGGCTTC 2991 28 92.9 0 ...........A..........C..... | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 CTGCTCCCCGCGAGTGCGGGGGTGAGCC # Left flank : GGGGGCCACGAGCAAGGCTCAGGCTCACAGGGCCGGGCCGCTGGATGAAGCATCGGCTGTGACGGGGCCGCGCTCCGGGTTGCTTTGTGGAGGTGGCGACTCGGCTGCCACGAACTCTCTGTCCCGGCTAGCTTCTTCATGGGCGGTGCTTGGGGGCAGCTGGGGGAGGGCCCTGCTGTCAGCGGGCTTGGCCTGTCGGGTGCTCTTCTCGACTCCGCTCGACTCCGCTTCGGGGTTGGCTGGGCAGATCGCCTTTGCGGAGACGGGTCGCGCGGCCACGATCGGGACCATCCCCAGCGCCCAAGGTAGGCAGGCTCAGGCAGTGGCGCCGGGGCTTGGTGCTTCTACCGGCCGATGACCGGGATGGCTATGCATGCAGTGCTCTGCGGCGAAAGCAAGGCGGCGGGGGAGGGATGCGGGCGGCGGAGGCTAGGGTGGCGGACATGGCGAAGTTGGCGTGGAACGGCGACTTGCCGAGGTGAAGATGCAGGTCAGGGAGA # Right flank : TCCCGGGCTGCAACGCACTGGCCATGAGGAGCCCGCGCCCTTGAGCCCCGCAGAGCCATGGTCGTATCCCTGCGATGAGAAGGAGCCGCATCCTCGACCGACCTAAGCGTCCATCGGGTAGGAAGAGGCGAACTGGGCGCCACCGGAGAGGACTTCTGCAAAACGTGTCGGGGGCCTTCACTCCACAGCGCCCCTGCTCACCGACCGTATGCCCAAGGCGCACGACGTGGCCCGCCCACGAGCCCGTCAGGCTGTCCTCGGCCCCCCGCGCGCCCCAGTCAGGAGCGCCCACCCACCGCTGGCCCCGCCCCCGCCTCCCCGGCAAGCGGTCACGCAACCCCCGCAAACGCCTCTGCCACGTGCTCGCGGCAGGCAGCGCCCCCGCACCCGCACCCGGAAGCTCCCCTGCCCGGTCCTGCCAAGCCGGGAGCATGCCCCCGAGGCGAGCCCAGGCAAGGCCCACCGGCCGCCCCTCTCGCCCCGCCACAAGGAACGCGACG # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGAGTGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 7271-6876 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOII01000070.1 Streptomyces albidoflavus strain NRRL B-1271 contig70.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7270 29 100.0 32 ............................. TTGAGCTCCAGGTCGAGCGACGGGAGTTCAGC 7209 29 96.6 32 ............................T CTACGAGGCGGCATACCTGGAAGCGGACAACA 7148 29 100.0 32 ............................. GTCTGGGCGGCGTGCACTCGGGCTCGGGGGCG 7087 29 93.1 32 A........................C... GACGTCGACAAGTGCTACTGGCGCCTGGTGGA 7026 29 82.8 32 ...T..T...T..A......C........ TCCTCGGTGGTCAGCTCCTCGCTGCCCGAGTC 6965 29 86.2 32 A.......T...C...........T.... TCAGGGAGTCCTTGAAGGGTCTCCAGGAGAAA 6904 29 89.7 0 ............C...T......A..... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 92.6 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : ATACGGCGACCACCGAGATCTACACGTAAGGAGTCGTCGGCAGCGTCAGATGTGTATAAGAGACAGGCTCTTGATGGGGTCGAGGGGAGGGTTGTATGCGGCTTTCAGGGCAATTGCCGGAATCTGGCAAGCTTGCAGAGATGGGGTGTGGGGGCGGGTAAGGCCGCAGGTCATGGAG # Right flank : AAGCGGTCGGCCGCGTGCCCCGCCTCGGCGTGCTCCGCTCCGAGGCGGCCCCCACCCCCTTCGAGTGATCCCCCACCCCCCAAGTGCATCCCCCCACCCCCCGGGCAGCCTCCTCCAGGGAGTTCGTCCACCCGAGAGGAAGCACCGCGTGGGACTGTCACGGAAGTACGGAACCGCTATCACCGAAGGGCCGACCCCGGCCGATGTCGCCGGGCAGGCTGCCCTGCCCTACCCCGACGGGTGGGCTGCCGTGGCCTTCTCCGAGGAGTTGACGAGAGGGAAGGTGCTCACCCGGCCGCTCGCCGGGGAGGATGTCGTGCTGTACCGGCTCGGGACCGGTGCTCTGCGGGCCGTGAAGCCCTACTGTCCCCACCTCGGCGCGCATCTGGGGCTCGGCAGGGTCGACGGGGAGGACCTGGTCTGTCCCTTCCACCTCTTCGCGTTCGGGCCCGACGGGGCCTGTGTGCGGACCGGGTACGAGACGGCGCCGCCCCGGTCGC # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 140298-140450 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOII01000006.1 Streptomyces albidoflavus strain NRRL B-1271 contig6.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 140298 24 100.0 41 ........................ TCTTGAACGGACGAGTCCGATCCGGACCTCGGCCCACAACC 140363 24 100.0 40 ........................ TCCTGAACCGTCAGGTTCCCCCGGGCCCAAGCCCAAAGAT 140427 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================= ================== 3 24 100.0 41 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : CCAGGGCCGCAGGGCATCCAGCGCCGCCGGAGCGGGCGGCGCACCCCCGGGCCCCCGCACCAGCCACTCGTTCCACAACGCACCCCCGGGCGCCACCACCGCCTCGAACCGCAACGCGGGCCAGAGCACCACCGGCCACCGCAACGCCTCACACTCCAGATCCCCCACGACCCGCCGCTCCACGGCCTCCGGCACCCCCAGCACCGACCGCAACAACCCGGCCCCCCGCCGCCCCCTGGGTAACCGCACCATCGCCTGCCACCGCCGGTTCGCCTCCCGCATGGCGCCGGCATCCACCCCCAGCTCCCGCCGCGCCTCCTCCACCATCCCCGCCTGAAAATCAGCCATCCGCCGCAACAACACCAACTGAAACTCAAGCGACCCGAACGAACTGGTCCCACCGACAGCAGCGCACATCCCCCCATTGTCCGCAGCCCCCACCCCACCGCGAAAAACAGCGGGCACGACCACCGAGAGGCAACTGGCCGACCGCCGAAAAA # Right flank : ACCCCACCGCACCCCCGCCGGGGAGGGAAGACTCACTCCCCGGCCATCCTCCGCAACATCCCCCGGAGGACCTCCCGCTCCTCCCGGGAAAACCCGGCAAGCGGCTCCCGAGCAAAATCAAGGGAGTCCCGCAGCACCCGCGCGACCTCAAGCCCCTCCGCGGTCAGAGCGGCCACCTTGATCCGCCGGTCCCCGGGATCGGCCTGCCGCTCGACCAGCCCCCGCAGGGCGAGCCGGTCCACGATCCCGGTGACGTTCGACGGCTCGCACTTGAGCCGCCGGGCGATCTGCCGCATGGGCATCGCCTCGAGGGACAGCAGACCCAGTACACGCGCCTGCGCGCCGGTGAGTGCCTGCTCGGCGGCGGCCCGGTCGTACTCCTCGTGGTACCGCGCCACGACAGCGCCGATCAGCTCGACGACTTCGAGGGTCAAGGGGTCCGTGCGGGTGGCCATGGGTCCCAGGATAGCCGGTTGCTTGACAACATGAAATATTCAGAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 84-409 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOII01000082.1 Streptomyces albidoflavus strain NRRL B-1271 contig82.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 84 28 100.0 33 ............................ GGACGACAAGACTCCCGAGGAGGCCCGCGGTGA 145 27 96.4 33 ......................-..... GGTCGACGGGGAGATCCCGTATGTGGTGCGCAC 205 28 100.0 33 ............................ GGGGCCGCCGCCAACGCGGTAGTGGGCGAGGTC 266 28 92.9 27 ..............A.T........... GATGAGGCCGCATCCGTGCCAGAGGCA 321 28 82.1 33 ....C....A.......C....G.G... GGTCACCGGCCAGACCTGGGACGACGTGGAAGC 382 28 82.1 0 .................A.A.TG....G | ========== ====== ====== ====== ============================ ================================= ================== 6 28 92.2 32 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : GGCGTAGGTTGGGGGGTGCGAGGGAGGGGGCGGCGATGGGTAAAGGGATGGCAAAGGCCGTCTGAAGATGCAGGTGGGGAAGGG # Right flank : GCCATGGACTGGTCCAGCGTGTTGTGCCTCACCTCACCGCCCGCACCATCACCGTCAGCTGAGGCGAGGCCGGCGAAGGCTGGCTAGTACCGATGTCCTCGTACCCCCACGAGCGGTACAGGGCATGCACCTTCCCGTTTCCTGCCGAGGAGTTGACCATCAGAGTCACGTACCGGTCGTCGCTGGCGGCGAGGAGTTCGTCGTGGATGCGTCGGGCGGTGCCTGTCCCGCGCCAAGCGGGTCGTACTCCGATCTCCTTGAGGGCGAGCGTCGGCTGCGCGGTGTACTCGTCGCCAGGGGCCGGGGTGGTGCGCTGCCAATACCGGTCGCCGTGCTCGATGCGGTTGGCGTACGCGTAGCCGACCGGCTTGCCCTCGGAGTAGGCGAGCACGGCGACGAAGCCGGGTTCGCGGCCGTGCCGGTCCAGGCGCTCGCCAAAGACGAGCGTCGTGTAATTCGGGAGGTGCAGGAGCGGGGCTCGCACCTCCGCGTAGACCTCG # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //