Array 1 231782-227074 **** Predicted by CRISPRDetect 2.4 *** >NZ_VORM01000001.1 Subsaximicrobium wynnwilliamsii strain G#7(T) NODE_1_length_354223_cov_156.175, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 231781 36 100.0 29 .................................... ATTTGGTATTTCAAACCATCTTGCCTGTT 231716 36 100.0 30 .................................... CAGCGTCTGAACAATCAAGCACAAATTGTG 231650 36 100.0 30 .................................... AATCTTTTGTGCGCCCAAATGCAATCAATG 231584 36 100.0 30 .................................... GATGCCCATGTTTAAATAATTCTCTGGCAA 231518 36 100.0 29 .................................... TCTGCACGCTCAATGTCCACATCTCCTGT 231453 36 100.0 30 .................................... AAACTAAGATCTGTTAATGGCGGTATAACA 231387 36 100.0 30 .................................... CAGCATTGTCGATTGAATAAAGTCCACCAC 231321 36 100.0 30 .................................... CACAAATAGAGTAATGACCTCTGCTGATGG 231255 36 100.0 30 .................................... CGTGTTAAACGAACAGCCTACTTTAGACTA 231189 36 100.0 29 .................................... CTTTATTTTAGTCCAATCGGCATAGAGGT 231124 36 100.0 30 .................................... ATCGCAATCTATGAGTGCGGCAAAATAGGG 231058 36 100.0 30 .................................... TTCCTAAATGCAACACCAGGCGATCGCGTT 230992 36 100.0 29 .................................... GAGTATATGAGATAGATGGTGTGATGTAT 230927 36 100.0 30 .................................... TTGGGTTATTTCTGATTGAGGATCGTTTTT 230861 36 100.0 30 .................................... CATTGTAGCTGTTTTGATTGCGGTACTATA 230795 36 100.0 30 .................................... CAAAAAAAATTTATCTCGAGGAGTTTTTAG 230729 36 100.0 29 .................................... TTCGTGTAAGCGATCACTAACATGGTAAG 230664 36 100.0 30 .................................... TTTGTGCCTTGAAACGCTTGGACGCATTCC 230598 36 100.0 30 .................................... CAACCACTAAATGGGAATATTGTAAGGGTG 230532 36 100.0 30 .................................... ATAGAAGAAATTATTGAATCTTACCTAGCG 230466 36 100.0 30 .................................... AATATCTGAACCGCTAATTTTAGTACTGGC 230400 36 100.0 30 .................................... CCATTAGAAACCACAAAGAAACATTTTAGG 230334 36 100.0 30 .................................... TTGGGTTATTTCTGATTGAGGATCGTTTTT 230268 36 100.0 30 .................................... TATTGTTTTAATTTAAATTTGTTGTTCTTA 230202 36 100.0 30 .................................... AAAACCCTTTATTTCAATGAGCTGTTTTGT 230136 36 100.0 30 .................................... TTTGGCATCTGATTAAACCTTTTAAGAGAT 230070 36 100.0 30 .................................... GTGCGACCATCGTGGTATCGGCTATTATTT 230004 36 100.0 30 .................................... AGAATAAATCCGAATAAGTTCAGGGATGAT 229938 36 100.0 30 .................................... AAGAAGATACTGCGACAGGGGATTTATTAG 229872 36 100.0 30 .................................... GCCCATCAAGGATCCTGAGCCATACGAAGC 229806 36 100.0 30 .................................... AAAATTGGTTTTCTGGTGGCGCTGGTGCGT 229740 36 100.0 30 .................................... ATTACGGAAGGCAAAGTGTTTAAGGAAATA 229674 36 100.0 30 .................................... TTTTATTCCAAAGACCCTGCACGCAAATTG 229608 36 100.0 30 .................................... CTCGGTCTTTAAATCGTCTTCGGTTATGTA 229542 36 100.0 30 .................................... TTGTAACTGTAGCAATTCACACGACACAGT 229476 36 100.0 30 .................................... CACTACCATATAGCGACTGATACGTACCTA 229410 36 100.0 30 .................................... AGTATTTGGTTGGGCATGGCCACTCTTGTG 229344 36 100.0 30 .................................... TGGCAATGCATCTAAAGACAATCGCACCAG 229278 36 100.0 30 .................................... AGCTAGAAATGCATTAATAGCACGAGGTTG 229212 36 100.0 30 .................................... CAATACCCAGGACACCGGCAGCTGTTGACG 229146 36 100.0 29 .................................... TCCTTAAAAAACTCGGTCGCAGTTTCTGC 229081 36 100.0 30 .................................... TCTCAAGCCGGTTGCATCCAAGCATTCTGC 229015 36 100.0 30 .................................... AATCCCCTACGAATTTCAATTAGTGATGGG 228949 36 100.0 30 .................................... ATTAGCCTTTTCTTGATTTAAAAAAGCCCA 228883 36 100.0 29 .................................... GAACGCTGAAGCGTAAAATGTCATGGTTG 228818 36 100.0 30 .................................... GGAACCGAAATACTAGCCTTCAAGTCCCAG 228752 36 100.0 29 .................................... TACAGGAGCGCCATCCCGATTGGAAGGTG 228687 36 100.0 29 .................................... CTAAAGCTGTTTTAACGGCATTATAATGT 228622 36 100.0 30 .................................... CTGGTTTTTCACAAACTTGGAGAGGATGCG 228556 36 100.0 30 .................................... TCTGGATTAATTAACTAATATCTACCTACG 228490 36 100.0 30 .................................... CGCAAGATGTTTTATTCTTACGGCAATGGG 228424 36 100.0 30 .................................... TTCCTAAATGCAACACCAGGCGACCGCGTT 228358 36 100.0 29 .................................... TCCTAAATGCAACACCAGGCGACCGAGTT 228293 36 100.0 30 .................................... CGGCAATAAAATACATCGGCTCGATCTTCA 228227 36 100.0 30 .................................... TGCTTTTAAAAAACCTATTACGATGAATAC 228161 36 100.0 30 .................................... CATAAGACGTTTATAACTAGGCGTTTTTAG 228095 36 100.0 30 .................................... ATAATATATATTTATGATGATATTATATAG 228029 36 100.0 30 .................................... CACTACCACATAGCGACTGATACGTATTTA 227963 36 100.0 30 .................................... TATAGTAGTAATAGTATATTCATTAGTACC 227897 36 100.0 29 .................................... AAATGGTACAATTTAATAATAGCACTATA 227832 36 100.0 30 .................................... AAGCTCCCGGTCACAACGTTATTAGCGTTA 227766 36 100.0 29 .................................... ATCTCGGCATACTCAAACTCTGGGAATAC 227701 36 100.0 30 .................................... CTTGAGACTGCCATTTTATAGCTTTGACAA 227635 36 100.0 30 .................................... TCACATCGTAATCTCCATTTAATGTTGCTG 227569 36 100.0 29 .................................... TCATCTACGTGGTCATTGATGCTTATAAC 227504 36 100.0 30 .................................... ATTATACCGCATTTGCGCTAATAGCACCCA 227438 36 100.0 30 .................................... AGAACCGTGGTTCTAACCTTTCAATCCCAG 227372 36 100.0 30 .................................... AGGGATCTCATCGGATTGTTTGAATATTGC 227306 36 100.0 30 .................................... AAATACGTACAAAGCACACTACTTTGATGC 227240 36 100.0 29 .................................... AGCAACGGATGATCGCGGCCAAGCCCGGC 227175 36 100.0 30 .................................... CATGTGAGTTTTTAATTGTGTCGGTGCCTT 227109 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 72 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAGACACGATATT # Left flank : CACAAATTAAAGATACAAATTCCAACGTTTTTAGAAGAATTCAAAGTTTTGGTAAAGGTAAGACCGGATGGCTGACGTTTAATCCAATCAAAGTCAAAGTTTCTGTTTCAGGAAAAATAGTAAAAATTTAATAAGACTAAAATGAAAAGTGTGATTTTACATCAAATAAATTTTTTGAGTCATGACGCGGCAAAGCTTTTCCTTAACCAAACAAAATGACGAATGGTAAAAAATAAAATAGCAGATGACGAGTTCAAATGCAAAAGTGAGGCCATCAATTATCTCATTAAATAAGCACGAAAGCAAATAGTGTATTATGATTTTGTGCGAATGAAAATAGCGAGCAAAACGGTTTTGCTAAAAAACAATCCCGGGAAGTAATGTTAGATGAATTCAAACAAGATTTCCATATGAGGAAAGTTCTTTGACATAAATGGGTTTATTAAGCAACCAAACCACAACGGAGAAATGATCTTTTCAAATTTTCGAAATGATTTTCC # Right flank : AGTTGGCCTCTTGCCTTCTGGTAGTCATGCATTTAAAGTGAAATATCGTTTAAAAAAACGCTTCTTTCTTGCAGTGATAAGGCAAGATTGAAGCGTTTTTTTGTTTTAAAACAGTTCCAGTTGTGAGGGTTGTGGCTCGTTTGGCACTTCGGACCTGCCCCAAAAGTTCATGATATTGCCAAATTGTTTGTCGGTAATCCTGAGAACGCTAACCTTTCCCAAAGGCGGCAGTAAACGTTTGATGCGTTTCTCATGCACATCGGCACTTTCACTGCTTGCGCAATGCCGCATGTACACCGAGTATTGCATCATGGTGAAACCGTCCTTCAGGAGGTTTTTTCTAAAGCCAGCAGCGTTGCGTCGGTCTTTAGCTGTGTTGGTAGGTAAATCAAAAAATACAAATAACCACATAATTCTATAGGCGTTTAGTTCCATAATTTTGGATATTTGATTTTTTTCCGCTCGCCGGTATAACACTGTTGCAAGGAGCTTGCTGTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAGACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 17454-17308 **** Predicted by CRISPRDetect 2.4 *** >NZ_VORM01000032.1 Subsaximicrobium wynnwilliamsii strain G#7(T) NODE_32_length_49142_cov_143.063, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================== ================== 17453 24 100.0 42 ........................ TTCCCTACTACCAACCACCTACTACCCACTACCAACTACCAA 17387 24 95.8 32 ....C................... TTCCCTACTACCCACTACCTAACAACTAATCC 17331 24 95.8 0 ...................A.... | ========== ====== ====== ====== ======================== ========================================== ================== 3 24 97.2 38 CTAATCCCTAATCCCAAATGCCTA # Left flank : ATTCGATATTTATTTTTTTTACTTCAATTTCAGTTACAATTTCCAATGCTGAGACTGTGACTGAGACTGATTTCGCTGTTGGCAGTTGTCTGTTCTCTTTTCTCTGTTCTCTGTTCTCTGTTGTCTGTTCTCTGTTGTCTGGCCCCTAAATCCCCAAAGGGGACCTAATTTCGTTTTGCCTTTTGATTATTGCTTAAATTTAAACTTCGTTATTCGGTGTTCAAAATTCGTTATTCGATATTTCTTTTTTGTTGCCTGTTCATTGGCCCCTAAATCCCCCAAGGGGACTTTTGTTTTTAAATGCAATTAAAAGTATTGCAACCATTTACCTTTTTGGTACAATCAAATGCCTTTAAAAAGAGGGACTTTTGATTCAAGTGTAAATTAAATTGATCTTTAAAACCATACTTCGATATGCCCGCAAATTCCCGAAAGGGACTTTTACGCTCGTTGAAATTGTTATACTCAAAAATAGTAAATTTCCTACTACCCACTATCAA # Right flank : GCAGCTACAAATCCGCAATAACACTCAAAATCCGTTTTGTCGCCTTGCCATCCCAAAGTTCCGGTACTTTGCCTTTTTTGTAATTACCATTTAAAATGGAATCGATGTGGGCTACTATTTTGTCTTTGTCGAGATTGAGCAGGGTGTTCGAGCCGATAGTGACGGTGCTGGGGCGTTCGGTATTGGGTCTTAGAGTGAGACAGGGTTTTTGTTTGAAGGTGGTTTCTTCCTGAATGCCGCCGCTATCGGTCAGCACCAAACTGCAATTGTGAATCAAGCTTTGGAAGCTGAAATAATCCAAGGCCTCCACAATGATCAACTGCTCCAACTGGTCAAAGCGTTCGGTCAATCCGAATTTAGCGATGTGCTTCCGTGTTCTGGGATGCATGGGGAACACAATTTTTTGCTCGCTTGGAAGATTCTCTAGTAAATCTGCCAAGGTTTTTAGTCCGTCTTCGTGATCGACGGTCGCTGGCCTGTGAATGGTCACGAGGATGAAT # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAATCCCTAATCCCAAATGCCTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //