Array 1 6095-3492 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLHX01000407.1 Acinetobacter baumannii strain ABBL127 contig-8000037, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6094 28 100.0 32 ............................ TTCAGTAATGCAGCAACAATAGCCCCAATAAA 6034 28 100.0 32 ............................ TGAACACAAGCAGAATTAGAAAACGTCAATTT 5974 28 100.0 32 ............................ AAAACGACCTTGTGACTCTGTGAATTCAATCT 5914 28 100.0 32 ............................ AGTTGCAACTTTAACAACTGACGGTACTGCTG 5854 28 100.0 32 ............................ ATAGTGGAAATACACGTAAGTTATTGATTTAT 5794 28 100.0 32 ............................ TGTTGTTAGGGCTATTTCTGCTTTATCCGATA 5734 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 5674 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 5614 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 5554 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 5494 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 5434 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 5374 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 5314 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 5254 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 5194 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 5134 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 5074 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 5014 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 4954 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 4894 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 4834 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 4774 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 4714 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 4654 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 4594 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 4534 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 4474 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 4414 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 4354 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 4294 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 4234 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 4174 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 4114 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 4054 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 3994 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 3934 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 3874 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 3814 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 3754 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 3694 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 3639 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 3579 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 3518 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 44 28 98.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 11185-16134 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLHX01000407.1 Acinetobacter baumannii strain ABBL127 contig-8000037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 11185 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCTTATGGCA 11245 28 100.0 32 ............................ AATGCTGCTGTTGACGTGGCTGGTCCAGTTGC 11305 28 100.0 32 ............................ GGAGTCAGGCACACTATTAGATAGCAGTGTGC 11365 28 100.0 32 ............................ ATGATGAACCTGTCTTACCTTCAGATCCTTCT 11425 28 100.0 32 ............................ AAGCATTTCAGTTGCACCAAGATGAATACTTT 11485 28 100.0 32 ............................ TCAAGTGCAGATGCAGCCTAATTATTCTTCTT 11545 28 100.0 32 ............................ AAGAACGTTTGGCAGCAAAAGGAACATTACCA 11605 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 11665 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 11725 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 11785 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 11845 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 11905 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 11965 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 12025 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 12085 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 12145 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 12205 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 12265 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 12325 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 12385 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 12445 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 12505 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 12565 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 12627 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 12687 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 12747 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 12807 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 12867 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 12927 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 12987 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 13047 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 13107 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 13167 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 13227 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 13287 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 13347 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 13407 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 13467 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 13527 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 13587 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 13647 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 13707 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 13767 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 13827 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 13887 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 13947 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 14007 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 14067 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 14127 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 14187 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 14247 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 14307 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 14367 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 14427 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 14487 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 14547 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 14607 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 14667 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 14727 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 14787 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 14847 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 14907 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 14967 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 15027 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 15087 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 15147 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 15207 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 15267 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 15327 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 15387 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 15447 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 15507 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 15567 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 15627 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 15687 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 15747 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 15807 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 15867 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 15927 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 15987 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 16047 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 16107 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================== ================== 83 28 94.4 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : ATTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTA # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.71, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //