Array 1 1105332-1106581 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP055418.1 Citrobacter sp. RHBSTW-00944 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1105332 29 100.0 32 ............................. TTGATCCAGATGATTTCTGCCGAATCACTAAA 1105393 29 100.0 32 ............................. ATTCAACCGGGTGCCCGGATGGGGCGCGGGTG 1105454 29 100.0 32 ............................. ACTAAAACCTCATTTTATCGTTCACTAACAGA 1105515 29 100.0 32 ............................. GTGGGCTGTGTGGGGGCGCTTCGGCGCGCCGG 1105576 29 100.0 32 ............................. AACGGACGTTTCTACCCGTCAGCCGAAATCAA 1105637 29 100.0 32 ............................. TCACAACACAACGCGACACATATGAAATTTCC 1105698 29 100.0 32 ............................. CCCTTCCCCGCTTTTCGGCGCGGCGGAGTATC 1105759 29 100.0 32 ............................. GTGGCTACCTGCGGTTGTTCAGTTTCTACAGC 1105820 29 100.0 32 ............................. GTGGCTACCTGCGGTTGTTCAGTTTCTACAGC 1105881 29 100.0 32 ............................. GGGTGGAATGTATGGGGTGGCATCTACTACGC 1105942 29 100.0 32 ............................. TAAGTTATTTCAGTGTCATCACTCATATCATT 1106003 29 100.0 32 ............................. ACGGGGCGGCGAGGTGAGCAGTGTCGCCTGAG 1106064 29 100.0 32 ............................. CCAGATTCGGAGGAAAAGCGGATAGCGCCACC 1106125 29 100.0 33 ............................. CCTGACTGCGACGTCACGCGGCAATGTCAGCCC 1106187 29 96.6 32 ............................A GCGGGTCGGGGTTTTTAAAGTTTTTGAGAACC 1106248 29 100.0 32 ............................. TAGGGGAGCAGAGGTGTCAATTTTTCTGGCAG 1106309 29 100.0 32 ............................. TGGGATGCTAAATTTGTATTCACGCAGGATGA 1106370 29 100.0 32 ............................. GAAGCGGATCTGGCCGAGTTGCATGAGGTGCA 1106431 29 100.0 32 ............................. CGGTGATTTCCGGTAAATAATGGGGGAGGTTG 1106492 29 100.0 32 ............................. ATCGCGCCGTTACAATGTTAATCTCGATTGGT 1106553 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================= ================== 21 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCTGTCTGGCTGCTGGAAATCCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACTGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAAAGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //