Array 1 47519-47190 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQXK01000026.1 Acinetobacter baumannii strain MCR8676 NODE_59_length_52715_cov_19.121294, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 47518 27 85.7 32 TAA...-..................... TGCTCCTGACGAGCTAAGACGGCGCGGCCACT CC [47507] 47457 28 100.0 32 ............................ ATTGAAGAAATCAGGAAGAATGCTCCAGAGGG 47397 28 100.0 32 ............................ AAACTAAAAATACAAATCAGTTGTTTTGATAT 47337 28 100.0 32 ............................ TCATAGATAAATAGACAAAAGGGGCCGTTAAG 47277 28 100.0 32 ............................ ATTGGATGCCATTACCCAATCCACCAAAAGCA 47217 28 89.3 0 ..........A.G..............G | ========== ====== ====== ====== ============================ ================================ ================== 6 28 95.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : AGCGTTTCAGTCTGGACAAGTGCCGGTATTTTTAATCAGTCTGAAAGCAGGAGGGGTCGGTCTGAATCTAACTGCCGCAGATACGGTCATTCACTATGATCCATGGTGGAACCCTGCTGCTGAAGATCAAGCTTCAGATCGTGCATGGCGGATTGGACAGGACAAGCCGGTATTTGTCTATAAGCTGATTACTAATAAAAGCATAGAAGAAAAAATTCTTGCCTTACAGCAAAATAAAGCAGAACTGGCACACTCTATTCTAAGTACAGATCATGAAGGCGAAGTGAAACTGACGGAAAATGACGTGATGAACTTGTTTGAGAAATTTTAGTTTGGTTTCAGATTACCCTAATCATCTGTAAGTATCTGAAAGTCTGGATGCAATTTTTTCCAATGTTCTCTTAATTTTTCTTTATGAACAGAAATCATAGGTAAGTCTAGTAATAGCACTGGCCATACTGACCGTGCTTTGTCCATGATCGCGTGAAGTTGTTTTTCAA # Right flank : TATTATTTTCAGTTATACTTATGCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTGCGATTATCCGCTAATTCGTCGGTCATCCCAATAACACGGCACTACAATCAAATGGTTCTCATGTAACCGTGACCATAATCGGACACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATCAGTAAGGTAGATTTCATATTGTCATAACGACTATATAGAACCTTATGTACCATCTCTAAGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACCAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTCTACTGTTATGCAGAATGTTGCGAATAATTGATGCACTCAGATGGGTTTTACC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 52821-58135 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQXK01000020.1 Acinetobacter baumannii strain MCR8676 NODE_34_length_65150_cov_18.443823, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 52821 30 93.3 30 ............................AG ACGGATTCATAACCGACACTCGCATTTTAG 52881 30 96.7 30 ............................A. ACATCTTTATCAGTATGACGAACCTTAGAC 52941 30 100.0 31 .............................. TGGCTGCAAGCGGGACCATAATCCATGCAGC 53002 30 100.0 30 .............................. TCTGGGAGATTTTGAGAGAGGGCACACTGC 53062 30 100.0 30 .............................. CAGGACATTGATCAGGTACTGATTTGATAA 53122 30 96.7 30 ............................A. TATCGCTTTCATTTTAAAGACGAATATCAA 53182 30 100.0 30 .............................. CATGAACTAATTTAAAAGCAACATTAGTAA 53242 30 96.7 30 ............................G. GCCTGTAGCAAAAGCAAAAGATTTAGCATT 53302 30 96.7 31 ............................G. AGCAGTAACCAAAAAAAACCGTTCAGGGGAA 53363 30 100.0 30 .............................. CTTAGCTGATCTGCGGATAGTTGCCACAGT 53423 30 93.3 30 ............................AG TTATAGGCATAGAGTGCATGGGGCATGTTG 53483 30 96.7 30 ............................A. AAGGAAAGGGTAGGCGTTCAGACCGTAAAG 53543 30 96.7 30 ............................G. ATGAAACTAAAAGCTATGCTCAATTAAAGA 53603 30 93.3 30 ............................AA GATCAGGGGCAACGAAAACAAGGATACCCG 53663 30 100.0 30 .............................. TACCCGATGCAGGCTGACCGCCAGTAATGA 53723 30 100.0 30 .............................. TCTTAGCAAATAAACTTGCGTAAGTTCCGT 53783 30 93.3 30 ............................AG TAAAGAACAACTTTCTTTAGAGTTGCCTAT 53843 30 100.0 30 .............................. AACTGAACTTTGCTATCAAAAAGTTTTAGT 53903 30 100.0 30 .............................. TAACTTTCAGGTCTGCCAACTCTGCTTTTC 53963 30 96.7 30 .............................A ACCCGATTAATCCCTATGACTGGCGAAAGA 54023 30 93.3 30 ............................AG TACGCAAAGCTTTAAATCATGGTTTGGTAA 54083 30 100.0 30 .............................. AATACTTCAATTGCACCGAAAGCTTTTTCA 54143 30 93.3 30 ............................AC TAAGCGTTCCATCTCGTACCGCAACTTAGC 54203 30 93.3 30 ............................AG ACGAAGGACATTTAGTCGGAGGATCAGGAA 54263 30 96.7 31 .............................G AAAGAAGGTCCTGACAAGTTAGAAAATGAGA 54324 30 93.3 30 ............................AG TTATTAATATCTTTGCGTGCAAGATTACGC 54384 30 93.3 30 ............................GA AACGACATTCAGTTCTATCCCTTTTAATTC 54444 30 93.3 30 ............................AA ATGGTGGTTCATTGTGTCAGTTCTCTATAG 54504 30 100.0 30 .............................. TTATCGATGCGGAGACAAAACCATGCGCGG 54564 30 96.7 30 .............................G GAATGAACTTGATGTACAAGATCGTGAATT 54624 30 100.0 30 .............................. TTGCGTCATATCACGTTGAAGTTGATGAAA 54684 30 96.7 30 .............................G TCATGGCAATCGCGATACTTAAGTTGTTTT 54744 30 93.3 30 ............................AA TAACTCAGGCTTTAAGTCATTAGCCATATT 54804 30 96.7 30 ............................A. CTTCCATAAGTTTACGGCAATCAGATTGGC 54864 30 100.0 30 .............................. GTTATTCATATTTTTGTAGCTGGTGCAATA 54924 30 96.7 30 ............................A. CAAAGTGCAGAGATGAAGAAGTATTTTTAC 54984 30 93.3 30 ............................AC CAAACGCTTTAGCCTTGATATGGTCAACGT 55044 30 96.7 30 .............................A CGCGATCCGACAAAAAGAAATGCTGAATTA 55104 30 93.3 30 ............................GA GCCAAAAATGTTATGACCCTGCATAATCTT 55164 30 96.7 30 .............................G CTCCAGACGATTGGCGTGATACTCCGGATG 55224 30 93.3 30 ............................AA TCGTCTGGAGCAGGTTCAACTTCAGGTATT 55284 30 100.0 30 .............................. AGCAAAGCGTGATTCAGGTTCTTGATACCA 55344 30 100.0 30 .............................. TGGATTGTTTAAAAAACCTAAATGAGTTAT 55404 30 93.3 31 ............................CG CGAAAACAAGAACAGTTACTAAGATTGCTAT 55465 30 100.0 30 .............................. GATCAATCAACTTCTTACAGTCTGATTGGC 55525 30 93.3 30 ............................AG ACGTATATATGGACGTTCTGCAAAGTCTTT 55585 30 96.7 30 .............................A ACGGAATCAAAATTGCAGCAGCAGCTACAG 55645 30 93.3 30 ............................AG AAACGGGCAGAAGTTTCAGGACCTGTGGAA 55705 30 100.0 30 .............................. AAAAATGTAAATAAACTGATGGCTGGCTTA 55765 30 96.7 30 ............................C. TGTCGCTTCACGCGCACCTGTGCCCTGTAT 55825 30 96.7 30 .............................G CTTCAGCAGCGCAGACTCTCAGGAACTGAT 55885 30 93.3 30 ............................CA TTGGTGGCAATTGATCTTTTAAGCTGATCA 55945 30 96.7 30 ............................A. TCTAACAAGTGAATATAAAGAACTCACAAA 56005 30 96.7 30 .............................G AGCTGTGCATTTACGTTCAAACTGATAATT 56065 30 100.0 30 .............................. TAAGAACAATTCCAACAAGAGACAGATTTG 56125 30 93.3 30 ............................AC AAAATCCAATCGATCACGACGGCTTTTCAA 56185 30 96.7 30 ............................A. GAAGGTCGTACTTATCCTTATGTTGAACTT 56245 30 100.0 31 .............................. ACAAAATTTAAGCAACTTTTGCTTATCTTCA 56306 30 100.0 30 .............................. GTTGTCATGCAAGTTCTGCAAAAATGCCTT 56366 30 96.7 30 .............................A CGTTTTATAGACATTTATCTGAACTTTGCG 56426 30 93.3 30 ............................AA TGTATGTTTATTTTGATGCAGGCGGTAAAA 56486 30 93.3 30 ............................AA CGAGAAATTGGAACTACAAAAGAACCAAAA 56546 30 96.7 30 ............................C. ACAAGTTACCCTTAGAAGATGAGGGTAAAA 56606 30 96.7 30 .............................G AAGAATTTGCAGGCCGTAGATTAACTAAAA 56666 30 93.3 30 ............................AA GAAATATTTGGAAGTTGCAAAATATTAAAA 56726 30 100.0 30 .............................. TCTTTTGTAAGTCAGTTTTAACTTTATCTA 56786 30 100.0 30 .............................. CAAACCTTTTATTGATGAAATGCAACAAAA 56846 30 96.7 30 .............................G ATCCGCCTCTTGAATGTCCAGATATTGGCT 56906 30 93.3 30 ............................AC CACCTGCATGACGATCTACATCGGCATACA 56966 30 100.0 30 .............................. CTTGAGCCATTGTGCGGCTACCTTGTCGCA 57026 30 96.7 30 .............................A CCCAAAGAAAAACGGGTAATCAAACGGGTA 57086 30 93.3 30 ............................AA TTTGGAGAACTCCGCAGAAAACAAACTCTA 57146 30 96.7 30 .............................C CGCTTGTCTGTCTCTAACTTCCTGCGCTAT 57206 30 93.3 30 ............................AG ACTGAAATTGTTGTGAAGCGTTACCAACGT 57266 30 96.7 30 .............................A AACGTTCAAAAGCTAAAACAACAGCTGAAG 57326 30 96.7 30 .............................A CAAACACAGCTTTAGCAGCAACAGAGTTAC 57386 30 96.7 30 ............................G. TGGCAGTAAATCGCATGACATTGCGTTATG 57446 30 93.3 30 ............................AG CAAATGGCAACCAACTACCTGCTTCATCAT 57506 30 93.3 30 ............................AG ATGTTGAATTGTATAACATGGATGCGTTTA 57566 30 93.3 30 ............................AC TTTGGAATTCGTTTATGCAATTCGCGCATT 57626 30 93.3 30 ............................CG CAAGGGGCTTTTTAGTGCCTAGCTGCTCGA 57686 30 100.0 30 .............................. CGGCACCACCCAGAGTAACTTTACCTTTAG 57746 30 93.3 30 ............................AC AGGAAGTTAAGGACATTGAACAGGCAATGG 57806 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 57866 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 57926 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 57986 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 58046 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 58106 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 89 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATT # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTCTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //