Array 1 2852-1299 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACWJG010000002.1 Streptococcus agalactiae strain 776 NODE_2_length_255212_cov_18.6953, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2851 36 100.0 30 .................................... AAGTCTCTGTTTTTGAAAACGTAGCAACTA 2785 36 100.0 29 .................................... TGCTGTGGCCTCCTCAATGATAGACTGGT 2720 36 100.0 30 .................................... TGAAAAAGATGGAGAGGTACAACGTTCTGA 2654 36 100.0 30 .................................... AAACTAAAGATATTGACTCCCTGCAGGATA 2588 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 2522 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 2456 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 2390 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 2324 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 2258 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 2192 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 2126 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 2060 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 1994 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 1928 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 1862 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 1796 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 1730 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 1664 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 1598 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 1532 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 1466 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 1400 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 1334 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //