Array 1 1501-1176 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRH01000003.1 Micrococcus sp. Alg238-R198, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 1500 36 100.0 36 .................................... AAGGGCAAGCAACGTGAACCGCGATCCGGTGCGCTG 1428 36 100.0 37 .................................... AGGAGCGGACCGTGACCGTGGCGGTCACCGTGTCCCC 1355 36 100.0 36 .................................... GAGCACGGCCTCGCGCAGCATGCCGGCCAGGTAGCG 1283 36 100.0 36 .................................... TGGACTGGACGAGGCCCGTTCCGCCCCGCCGCCGCG 1211 36 97.2 0 .....................A.............. | ========== ====== ====== ====== ==================================== ===================================== ================== 5 36 99.4 36 GCCTCAACGAAGTCCGCTCCCCAAAGGAGCGGAGAC # Left flank : CTGTCCCTGGTGGTGTGAGGGGGCGAGACGGGGCCGACTGCTTCCCGCGGGCTAGACGGCCGCGTTGATATAGACCGCGCTCGTCGCCGAAATTTTGCTGCAGCTGGCTGCGCGCCGGTCGCGCATGCGGGTAGGGGAGATGCCGGATGAACTTCAACGCGGGACAGCACGTGATGCCATGCGCCGGGCATTGGCCCAGGGCATGGCATTTCCCCGACTCGCCTACAGCCTTGGCCTCAAGACAGCAGATTCGCTGCTGATGCTCACTCCATGGAGCCAGGTCCAATGCCTCGAGAACGCGTCATCACGCTCGGGGACGTCATGTCCGCGATTCGACCCCGCCGGGGCGCCTCGCCCCTCGACGCGCTCTAGCGAATTGACCAGGGCAGGCAGGCGGCCTGAGTCCTACCCCGCCTCGGGCCCAGAGCGCTGACGAAGTCCGTTCCGAAGGAGAGGAGACACATCCAGGTCAGCGAGGAGCGAGCGACGACACCGAACGG # Right flank : ACACCGTCCACCCGGGCAGGCTTCGCGACGGGGTCGCCTCAACGAAGTCCGCTTGTAAGCGGCCATGAAAAGCTGCCCATAGGTGGCCAGGGAATGACCCGCTGACGGCCATGAGGACTGCCCAGTGATGGCCACGGGAACTGCCCGGTGCTGGCCATCTGGTTTGCCCGCGTTGCTCGTTGCCCGCCGCGTCGTGAGCCGGCGGGGGCCTCCTCCCCGGGTTGGATATCGGTGTCGAATCGAATCCAGCGAGGAAGAGGCCCTGAATGAAGGATGCCGCAGAAACCATGAAAATACTCAGTGCCTATGACCTGACCAAGTCATTGCGGGGCGCCGCCGAGCTGGCCGGTTGCTCCCATCACACCGTGGCCCGGCTGGTGCGGGCCCGCGACGCCGGCCAGACCCCTGGATCCGGAGCCAGCCGCCCGAAGGTCACCGATGTCTGGCTGCCCAAGATCGAGGAATGGGTCGAGGCCTCCACGGGCAGGATCCGCGCCGAT # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGTCCGCTCCCCAAAGGAGCGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 54287-55190 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRH01000009.1 Micrococcus sp. Alg238-R198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 54287 36 100.0 34 .................................... TTCCGGCTCAACCTCATCGTCGCCTACCAGAACT 54357 36 100.0 39 .................................... ATGAAGGCCACGGTGCCGCTCATGGTGTCCAACGCGGAG 54432 36 100.0 36 .................................... CGGCTGATCGACGACAGATCCGCGTGTCCCAGCGCA 54504 36 100.0 34 .................................... AATCTCACAGGGGGCGGTGAGAAGATTGAATTGG 54574 36 100.0 36 .................................... ATGACAATGAAGGGCCGGGATGTGATGCCCCGGCAT 54646 36 100.0 36 .................................... CTCTGGCTCATGAGGCGCGTCTCCGGCCTCATGTCC 54718 36 100.0 36 .................................... CCGCTGGACCAGTATTCCTGGGTGGCCCTGGGCAAC 54790 36 100.0 38 .................................... ACCACCGTGGACCTCGCAGACCCCGCCAACATGGGCGA 54864 36 100.0 35 .................................... ATGTTCTTGCCGGACGACTCCTGACGGATCAGCGC 54935 36 100.0 40 .................................... TGCCAGGCAGAGGCCGAGGCAGACCGGCAGCGATACGGCG 55011 36 100.0 35 .................................... GAACGGCTGATCGAGGGCATGGTGGAGCACCCGCT 55082 36 100.0 37 .................................... CCCAGCGGAAGGCGATGGCCCGTTTCCGTGGTCTGTG 55155 36 97.2 0 .....................A.............. | ========== ====== ====== ====== ==================================== ======================================== ================== 13 36 99.8 36 GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : CGTTGAGTGCCCGGGATCGTCTCCGGAGGAGGCTCATCGCCTATGACATTCCTGACGACCGCCGCAGATCCCGGGCGGCCCGCGTTCTCGAAGGGTTCGGAGATCGAGTCCAATATTCAGTCTTCGTGGTGGATGCCTTGCCCGCCCAGTTCGTCTCCCTGCAAGCAGCCCTCGAAGCGGTGCTGGATCCGGGCGAGGACAGCGTGCTGGTCTGCGACCTCGGCCTGACGGCCACGCTTGGCGCAGAGCAGTTCAGCTTTCTGGGTCGATCACGCGAGATCTCTGTGGATGGGCCCATCATCATCTGAAGCGAGCCAGGGACCTTCGCGAGGGCTCCGTCGATGTCCGGAATCCGGCGAGCCGTCGCATCAGAAAAGGGCTTGTCAGCCCACGGTTCATGGGTCGAGGCCGATAAGCATGGCGCTCCACGGACGCCTCTTGAGCCCAGGGCTCGCCGAAGGTCGCGTCTGCCCATGTCAAGGGCTGTAATCTGAGGTGCT # Right flank : CACGTCCACGAAGGCGGGTCCGAACGCGGCCGCCGTGAGTCTCCGCTCCTGTGGGGGGTCAAGTCCCGAGTAGTGGTGTAACGCTCTGATCCTCCATTGGTGCTGCTAGGCGCTGAGTTCGAGGGTGGTTTCCGGTTCGGCGTTCACCTCGTTCCCGGTGTCGTCCACGGTGGTGAGGCGGCAGCGGGCCAACACCTCGAGGCCGAGGTAGCGGCGGCCCTCGGCCCACTCATCGGTCTGCTCAGCCAGCACCGCCCCGACCAGGCGCACGATCGCTGCCCGGTTCGGGAAGATGCCCACGGCGTCGGTGCGACGCCGGATCTCGCGGTTGAGCCGTTCGGCCGGGTTGTTCGACCAGATCTGGGTCCACACGTCCTTGGGGAACGTGGTGAACGCCAGGATGTCCGCCCGGGCACCATCGAGGTGTTCGGCCACCGCGGGCAGCTTTTCGCTGACGTAGTCCAGCAGCCGGTCGAACTGGGCGTCCACGCTGGCGGCGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 9685-9290 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRH01000023.1 Micrococcus sp. Alg238-R198, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9684 29 100.0 32 ............................. GCGGACTCCCAGTCCATCGCCAGCTTGCCCGT 9623 29 96.6 32 ......T...................... CTGACTGACGGACTGACTGACTGACTGAGGGT 9562 29 100.0 32 ............................. TTGGTCTTGCCGTCAGCAAGCATGCGAGCCAT 9501 29 100.0 32 ............................. GTCCTGACGCTGTTCGAGGACGGCAGGGTAGA 9440 29 100.0 32 ............................. GACGCTGCTGCTGTGGACGAGCTGCTTGCCGA 9379 29 100.0 32 ............................. ACGGGCACGTCGTCAAAGTCGGTGAGCCCGTC 9318 29 86.2 0 ......T....C.G..............A | ========== ====== ====== ====== ============================= ================================ ================== 7 29 97.5 32 GGAAGCCCCGCGCACGCAGGGATGAGCCC # Left flank : GGCCGCCAAGTCCGGGTTGAACCGGGCGATCCTGGATGCCGGGCTGGGGATGCTGCGCCGGCAGCTGGACTACAAGACCTCCTGGGCAGGGTCCCAGGTGAAGATGATCGACCGATTCGCGCCCTCCTCGAAGGCGTGCTCGCGCTGCGGGACAGTCAAATCCACGCTGTCCCTGGCCGAGCGGACCTTCGAGTGCGAGGCCTGCCACCTGGTGATCGACCGCGACGTGAACGCCGCGATCAACATCCGGGCGTGGGCTGTGCAGGAGGAGCGTGGAGCAGGGGTCGAGCTCGCCCGAGGCCGTCGGGAGAGTCGAAACGGACGTGGAGCTGCTGTCTCGGGCCCGCCATCTGGCGGGGCCGCGAGGCAGGGGCGTGGAAGCGTCAAGCCCGCACCCCAGGGTGTGGGCATGTCCAGCCGGGCAACTGGCTGGTCATCCCAACCCCCCTCAACCGAAGGGGAAAGCGCAGAGCGCGGAGCATCCGCCCTGGCCAGGTAGT # Right flank : GACTCCCAGGGGCATTCACGGCTCCTGGGTTGAGCTGTCGTAGGGATCTGGGCTGGTCCCGGTCCTTCCTAGACACCATCCAGTGCTCGTGACAGCTGCGGGTGTCGTGGAGGTGCTGCGGGGACGTGTCGCGGTGTCCGCGGGATGCTCAGCTGGTGGGCTCGGGGACGGTGGCCTCGCACTGGACCATGGGCATGCCCTTGGGGTCGCCGGTCTGGGCGTCCAGGGGGGCGGTGGTGCCGTCGGCGATGATCTCGCAGTGCAGGTCGCCGGCGGCGGGCAGCTGCGGGACGTTGGCGATCACCTGGATCTTTTCACCGGGCTTGGCCTGGGTGCGCAGGGTCAGGGGGGTGGTGCCGGCGGGCTCGGCGGGGATGGTCTCTTTGGTGTGGGTGTCCGCGCCGGTGCCGCCCACGAAGAGGTTCACGCCGCCGCGGGCTGCCGTGGTGGTGGTGCCGTCGCGGGGGATCCACTGGATGCGGATCTGCACGTCCACGGGC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAGCCCCGCGCACGCAGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //