Array 1 1-267 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATR010000110.1 Atlantibacter hermannii strain 3608 Eh-3608_contig110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 25 86.2 32 ----......................... GCGGCAATCCTAAGGCATGGCAGCAGTTAATG 58 29 100.0 32 ............................. CGATGCTCCGGCGCGCAGAGGGCTCGCCCCGA 119 29 100.0 32 ............................. CGGCTCCTCAACTTCAGGAAGCGGAAGCAACT 180 29 100.0 32 ............................. CGGAAAAACTTCATCTTTCCTGCGTGTCTGCG 241 27 93.1 0 ...........................-- | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : | # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-395 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATR010000093.1 Atlantibacter hermannii strain 3608 Eh-3608_contig93, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 29 100.0 32 ............................. TGACCGGCGATAACGGCAGTTTTGTGGAGGAG 62 29 100.0 32 ............................. CGCTTCTCTGACATGACAAAGGATCGATACGA 123 29 100.0 32 ............................. GAGTGGGACGACAAACGCGGCTGTTGGAAAGA 184 29 96.6 32 ................T............ CGTAAAAGCTGTTCACATCAACTAGGGCAAAC 245 29 96.6 32 ................T............ GTCGGCAAAATACTCGTTGATGTTCGCCTTGC 306 29 96.6 32 ................T............ TGATGCTTGCTAACCATGACGATATGGAAGAG 367 29 86.2 0 .......................CGTT.. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : GGCTAGTTAGACTATGCCCAACGCTTCAACGTTACGCGTTTCACAATAAAAAGTGTTTTGCGGGGCGAGCCAGGTACTGTGCAGTTTCGGTGGTTGGTAGAAAGTGGTTTGCTTGGGGCCAATAAGCCCGGTGGGTCTGGCGGTTTTGGCGTAAAGATTAAAAGATAAGGCGGCGGGTTTGTGGCCCACCGCCGGGTCTGACTTAGAAGGTTTTGCGTAAACGCAGGCTGAAGGTGTGCGCCTGATAATCTTCGCCCGCTTGCAGGTCGTAACGTGCATCCAGGCTCAGCGAGTTCACATCATACAGGGTGCTGCCGATAGCTACGCCCGCCATATCTTCAACCGGTGCCGCGCCTTTGGTGATAAAGGTGGTTTCACCGATGCTGTCTGCGGCGTAGGTCGCGGTGTTGCTCATCTGCTTGTTATCGTACTGGTGGATCCAGGACAGTTGAACAAACGGCGTCAGGTTGCCCAGACGGGTTTCAAACGTCTTGTCCAGA # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCCAGTGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 334-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATR010000117.1 Atlantibacter hermannii strain 3608 Eh-3608_contig117, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 333 29 100.0 32 ............................. CTGATACGGATGGGCAAGGCACACAGGAGATA 272 29 100.0 32 ............................. AGTAATCTGCCTGCGATAGAAATATCGTTAGA 211 29 100.0 32 ............................. CGCGGTTTCGTGGGCACCGAACGGGCACGCCT 150 29 100.0 32 ............................. AAAAAACCTCTTTGCTCGGCTTCAATGTTTAA 89 29 100.0 32 ............................. GGCAGGGAGCGGCGCAGCGGTCAAGCTGGTAT 28 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGATTGAAGAGGTGCTGGCGGCCGGAGAAATCCCATTGCCGACACCTTTCCCGGATGCGCAACCGCCAGCGATTCCTGAACCTGTATCAGCAGGTGACATTGGTCACCGGAGCCATGGCTGATGGCTATGTTAGTCGTCGTTACTGAAAATGTGCCGCCCCGGCTGCGTGGGCGGCTTGCAGTCTGGCTACTTGAAATTCGTGCGGGCGTATATGTGGGTGATACCTCTCAAAAAATACGCGAGATGATTTGGCAACAAATTAGTCACTTGGCCGAGGAAGGAAATGTTGTTATGGCCTGGTCCACAAATAATGAATCAGGCTTTGACTTCCAAACTTACGGCCAGAACCGGCGTATGCCGGTAGACTGGGACGGGCTTCGGTTGGTCTCATTCCTTCCTGAACAAAATCAATAAGATAGTGTTCTTTAAAAATCTGAAAAAATTGGTGGAATTTTAAGAGTGGTTAATGTTTATATAAATCAGTAACCTGCATTAAGA # Right flank : C # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-14.00,-14.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-1004 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATR010000031.1 Atlantibacter hermannii strain 3608 Eh-3608_contig31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 28 96.6 32 -............................ CGGTCGGCGACCACGATGTCGTAGAATATCCA 61 29 100.0 32 ............................. CCCTGTACTCCAACCCGGCGTATCGCGGTGAT 122 29 100.0 32 ............................. TTGTAGCTTGCCTTTAACAGGTCCGGCACCTG 183 29 100.0 32 ............................. CAATCCTTTTCCGGCGAGCTTCTTCCTCTCTC 244 29 96.6 32 ............................A TCGTCGAGAATGCCTTCCGGCAGTTCGTCCTC 305 29 96.6 32 T............................ CAACGTCAATCTTGGCTTGTTGCAGTTCCGCC 366 29 100.0 32 ............................. CAATATCCATTTTTGTAGCGTCGTAACCCATC 427 29 100.0 32 ............................. GTCGGCGCCGGCCTCGGCCAGCGTTACCCCCG 488 29 100.0 32 ............................. CAGGACTGTACTCGCTGGTATCCCGTGTTGGT 549 29 100.0 32 ............................. TCGCCGGCCCGGTCGATCGCAAACGCTCCGCC 610 29 100.0 32 ............................. CAGAGCTTTTCGTAAATCGGGAAGTCTTTCTC 671 29 100.0 32 ............................. TCGTCAGGCATCACGTCGGGCAGTTCGTCGCC 732 29 100.0 32 ............................. CAGTCGGGCCTCGAGACGCGCATCACTTTGCC 793 29 100.0 32 ............................. CAGCTGAGCGAAAACTCGTTCCTTTCTCCGAC 854 29 100.0 32 ............................. CGATCTCGCCGCATCGCTACCGGCCTGGTAAT 915 29 100.0 32 ............................. TTTCGCACCTGGTAAGTGATTATCAGCGGCTC 976 29 79.3 0 ..A.........TA.A.A.A......... | ========== ====== ====== ====== ============================= ================================ ================== 17 29 98.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : GAGTAAAAGTATTATATGCCATGCCCGGAGAAGCCCTCTCACGCAGGCAGAGCTAAACTCAGCAGACACTCTGCTCACTTCGATCTTTCCGCCATGAAAATGACGCGGAATTGCTGTGAATACTTAGCTCGCATCCCATTTCATTCATCACTCTGATAGCAATTCTTTATTTATTCCTGCGAAGAGGTATAAACTCTTCAAACCTTCCATCCAAAGGAAGGTTTCGGAGGACACAATGAACATAAGTGATGTCGCAAAAAAAACCGGTTTAACCAGTAAAGCGATTCGTTTTTACGAAGAGAAAGGGTTGGTGACGCCGCCGCTGCGCAGTGAAAACGGCTACCGCAGCTACACCCAAAGTCATCTTGATGAACTGACCTTATTGCGCCAGGCGCGTCAGGTGGGTTTTAACCTGGAAGAGTGTAAAGAGCTGGTGCACTTGTTCAACGACCCCGGGCGTCGTAGCGCAGATGTGAAAGCGCGTACCCTGCAAAAGGTGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1281-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATR010000104.1 Atlantibacter hermannii strain 3608 Eh-3608_contig104, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1280 29 96.6 32 ...............A............. CCGCAGACGCCTCCGTCGGCAGCATCAGGCTA 1219 29 100.0 32 ............................. GAAACTCACATCTCATATGCCATTCGACGGAT 1158 29 100.0 32 ............................. TAACTCACAGGAAGATCGGGAAGGGTAAGGAC 1097 29 100.0 32 ............................. AAATTTGCGTTTCACTCCGAGATATTACCAAT 1036 29 100.0 32 ............................. CTCCTGCGGGTATGGTTAGGGTTAATGTTGCT 975 29 100.0 32 ............................. TTATTCACATTGCGTAAATGTTGCATAATCGT 914 29 100.0 32 ............................. CCGCCGGTGGTTCAGGTTGCTATGGAGATCGC 853 29 100.0 32 ............................. GCGAGCTACACTCTTAGATGCCCCGTTTAATC 792 29 100.0 32 ............................. AGAACCAGATGCTGAACGGGGACGGCACCGGT 731 29 100.0 5 ............................. CGCAG Deletion [698] 697 28 72.4 32 AACCG.A.....-T............... CGGTAGAACCAGTTCCTCGGATGTCCCCCATA 637 29 100.0 32 ............................. CCCTCAGCCTTCAGGGTGTGAGTAATATCTCC 576 29 100.0 32 ............................. CAGGAGATATGAAACTGATTTGTGATTATTCC 515 29 100.0 32 ............................. GCGCGGACCCGGTTGTGCTGGCCGTAGCCCCA 454 29 100.0 32 ............................. CCGGACTGCATTGCCCGGCTCAAGTTTCTGGC 393 29 100.0 32 ............................. GATAGCGTCGGCATGGCCCTGCGATATCCGAA 332 29 100.0 32 ............................. CACAGAATGACCTGGCGACATCCGTTGGCGCG 271 29 100.0 32 ............................. ATCCGTCACAACCCCTCACACCGGCACGCCGC 210 29 100.0 32 ............................. TAATGATGTGGGGTTCGCTTTAGGCTACCCCC 149 29 100.0 32 ............................. GCCATAGCCGATATTAAATGCGGTGATGAATC 88 29 100.0 32 ............................. GATATTATTTTATTCGCCACATTCGGTATTGA 27 27 93.1 0 ...........................-- | ========== ====== ====== ====== ============================= ================================ ================== 22 29 98.3 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TCCCCGCGCCAGCGGGGATAAACCGGCGGCGTCATAACCGAACGTGCCCCCGCGCA # Right flank : C # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 578-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATR010000054.1 Atlantibacter hermannii strain 3608 Eh-3608_contig54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 577 28 96.6 32 -............................ CCAGACCAGTGCGGCACCGTCCCAACGTTCTA 517 29 100.0 32 ............................. ATTTGCCGTCCCGAAGCAGGGGTTGCTACAGT 456 29 100.0 32 ............................. TACCGTCTTAAATTCTGAGGTGGCAATATCAT 395 29 100.0 32 ............................. CCCCCGCTTTGCTGGGTGGAATACGCACAGAA 334 29 100.0 32 ............................. CTGGTTAGAAGACAAGAATCCCTGTTTACCGC 273 29 96.6 32 ............................A TCCCAGCCGCGTCGCGGGCGTCGGAAAAAGCC 212 29 100.0 32 ............................. GATGAAAACACAAAACACCCTTCTCTTCATCA 151 29 100.0 32 ............................. GCGTAATGTACAATGGAGTTTTCTACGACGAG 90 29 100.0 32 ............................. GGGCCGGGCAGTATAACGATGAGGTGCGGGAG 29 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : G # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 30650-32019 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATR010000106.1 Atlantibacter hermannii strain 3608 Eh-3608_contig106, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 30650 29 100.0 32 ............................. CGATCACCGCCGGAGAGGTATGCGAACGTAAC 30711 29 100.0 32 ............................. TCGCTACTCACCGCGCCATTGATTATGTCAAT 30772 29 100.0 32 ............................. GCCGCTTATGCCTACTTCGCGGCCTGCCCTGA 30833 29 100.0 32 ............................. CAAGAAAACTGGATTTCCGCTCTGTTCCGTTA 30894 29 96.6 32 ............................A TCTGGCCCAGCGTCCAGGTGTGGTCGCCCAGC 30955 29 100.0 32 ............................. CTGCTCCTCAACTTCAGGAAGCGGAAGCAACT 31016 29 100.0 32 ............................. AGGTTGAGAGATTTCAGCGATTGGATTTCAGC 31077 29 100.0 32 ............................. TCAGCCACCAGCCCCTCAAACAGCCCGTAGTA 31138 29 100.0 32 ............................. GATCTTCTCAGGTTGAGTATTGAGAAAGACGG 31199 29 100.0 32 ............................. TCAGCTTTGACGGTGTGGTACCGGATACCGGC 31260 29 100.0 32 ............................. GCGATGCACGAAATTACACGAAAATTACACGA 31321 29 100.0 32 ............................. CATGACTAAGACCACGATTTTTTCAGGTGTCC 31382 29 100.0 32 ............................. TATGAATTAACCACCTAACCAGGCCACTAACT 31443 29 100.0 32 ............................. CAGGTTAGATGAATGTTGCCTGCGGTCGAAGC 31504 29 100.0 32 ............................. CGCAACATGATTATTCTCGACTATATGGACGG 31565 29 100.0 32 ............................. ACGCCGCCAGTATAGCTGTGCTTCGTTAACGC 31626 29 100.0 32 ............................. CAACACGTCTTCATGAGCGTTGGTGGATTCCG 31687 29 100.0 32 ............................. CGCGCACAGCGCGACCCGTTTTGGTGTCGCAA 31748 29 100.0 32 ............................. GTGACCCACACCTCTGACTCCATTCGGCGGAT 31809 29 100.0 32 ............................. TGAAATTACTTGCCATATGTGAGCGGCTAGGT 31870 29 100.0 32 ............................. GACAGCACCGATCAGCCGCAGGTTTTCCGCGT 31931 29 100.0 32 ............................. GGCCGGTAGTATACGACCTTCAGTCACTTTCC 31992 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGGATTACGTGGCGATTGAAGCGCATATCGACGCGCATATCACGCAACTGCTGATGGCCTGCGCGGCCTGTCCGTCTCCGGTGGTGTTAGTGACCAACGAAGTGGGGATGGGCATCGTGCCGGAAAACCGTTTAGCGCGTCATTTTCGGGATATCGCCGGGCGCGTCAACCAGCGGCTGGCGGAGCAGGCGGAACAGGTGTGGCTGGTGGTATCGGGGATTGGCGTAAAGATTAAAGGATAAGGCGGCCCGACGCATCATGTTGGGGCGAGTGGAGAAAAGAACGTTAACGAATTTACGAAAAAACAGGAAGAAATGTGCGTCCGCCACCCTTCTTCGACGTGGAATGGTGGTAGATCTATTCGCCGTTGCTCAGGTTTCTTTTTTTATTATTAAAATCAAGGAACTGGAACTTCGATCATCATAAGAAATGTGATTAAAAAGTTGGTACTTTGCCTTGAGGTAATAAAGCTCTTTAAAAACAGTGACATATTTTTAGA # Right flank : | # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //