Array 1 1229156-1233370 **** Predicted by CRISPRDetect 2.4 *** >NC_015846.1 Capnocytophaga canimorsus Cc5, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 1229156 36 100.0 30 .................................... ACTTCATTTTAATCTCACACTATTTACTCC 1229222 36 97.2 81 .........................A.......... GCTATCCCCGATGTAATCAGCATCTACAATGTTGTGATTACCCTCCAAATGCTTTGCATTCATGAGTTCCTTTGAAAACAA 1229339 36 66.7 30 A.AAAAC..CA.GAAT.................... TTTTGCGAATGAGTTTACCCGAGTTCAAAA 1229405 36 100.0 81 .................................... ATAGCACAATATGGAGAAGAAAATGGTACTGTTGTGATTACCCTCCAAATGCTTTGCATTCATGAGTTCCTTTGAAAACAA 1229522 36 66.7 30 A.AAAAC..CA.GAAT.................... TTTTGCGAATGAGTTTACCCGAGTTCAAAA 1229588 36 100.0 30 .................................... TTCCTTTAAAATCTCCTTTTTGGGATACTT 1229654 36 100.0 30 .................................... AAGCGGTAAAAAACAAAATTTTGCAATTAT 1229720 36 100.0 30 .................................... TATGCAGGATTCCGACCGTATTCGGTTTAT 1229786 36 100.0 30 .................................... TGATAGCCATTTTAGCCGACTTGTGGAGTG 1229852 36 100.0 30 .................................... TTTGGTAAAAAACATCAATGCGGGAGTACT 1229918 36 100.0 30 .................................... TTTCTCTCACTTGTCACCTTTCGGTCCTAC 1229984 36 100.0 30 .................................... CGGAAAGGATTACACGTACTATATGCAAAT 1230050 36 100.0 30 .................................... TAATACCTAGGTCTGTAGTTGAGAGTGGAA 1230116 36 100.0 30 .................................... ACTTGAAAAAATATTAAATTTTAAACTACC 1230182 36 100.0 30 .................................... TACTATCATATAAATGAATTTTTTTCTACC 1230248 36 97.2 30 ..................T................. AGATTATCATCTTTGTATCGTTCCTTGCAG 1230314 36 100.0 30 .................................... AAATTATTACTTTGAATTTAATGTTAAGGT 1230380 36 100.0 30 .................................... TAAAACCCAATTTGGTAAAGATTTATCAGG 1230446 36 100.0 30 .................................... TTCTTCGGAATCTCTTAATTTGGAATTAGG 1230512 36 100.0 30 .................................... ATTTTTTTCAAAAGAGGTTATAGCTAAAGA 1230578 36 100.0 30 .................................... TATCGCCAATCACATCTGATGGGGATATTA 1230644 36 100.0 31 .................................... CTGTTGGACAGAGTGGTCAATCTCAGCAATG 1230711 36 100.0 148 .................................... GGCATTAGTGAATGGCTTGAGCGTTACCGAGTTGTGATTACCCTCCAAATGCTTTGCATTCATGAGTTCCTTTGAAAAAACAATAAAAACTCACGAATAAAATGAGAGCAGTTCCAACCCAGTTAATCTTAAAACCTGCATATTTCTG 1230895 36 100.0 30 .................................... GCGCCAAGCATGGCCGAGTACAATGCATCC 1230961 36 100.0 29 .................................... CTACCCTACTCGGTTCCTCGCCCCGTGTC 1231026 36 100.0 30 .................................... CTAAGTGGTTTTTACCCCAAAATAGAGAGC 1231092 36 100.0 30 .................................... TCAATGACATGTCCAAAAACAGTGTGCTTG 1231158 36 100.0 30 .................................... AAAAATGTTATTGTTACCATATTTGAATAC 1231224 36 100.0 30 .................................... GGGTTACAGGTGTGTATTACGACAACTGCT 1231290 36 100.0 30 .................................... TTTCTTCAGTTGGTTTTTTTCAAGAGAACA 1231356 36 100.0 30 .................................... CAATACCCAGCTGAACCATTTCCGCCCTTA 1231422 36 100.0 30 .................................... CAATATGATAGGAGAAGCAGAAGAAGACGT 1231488 36 100.0 30 .................................... TTTGAATGCCGTGATTTGGCGGTTAATGCT 1231554 36 100.0 30 .................................... TTCAAGCACGCCTTTTTCACGATGGATACT 1231620 36 100.0 30 .................................... ATTAAGTCAAGTTGCATCAACTCTAATAGA 1231686 36 100.0 30 .................................... CGTTTTTTACTTCTTGTTTTATATAATCAA 1231752 36 100.0 30 .................................... TTATGGAAAGAATTTTAAAACAATTAGAAA 1231818 36 100.0 30 .................................... CAGCTCGTATGTGGCAAGTTTGTATCACAA 1231884 36 100.0 30 .................................... TTGTTTGCTTCCCGCCATAATAACTAATCG 1231950 36 100.0 30 .................................... ATCCGCTTCCATTATAACATAATCTCTGTC 1232016 36 100.0 30 .................................... TACCAAAACGTCGATATTGGTCAAGTTGGA 1232082 36 100.0 29 .................................... TTTTCTGAAGTATAAATTGCCCTTTCACA 1232147 36 100.0 30 .................................... TAAAGAAAAAACATTAAAGGCTGACAGAGG 1232213 36 100.0 30 .................................... GCTCATTATTACCTCCAAAATATTGAACTT 1232279 36 100.0 30 .................................... CTCAATTTGAGGGGAATTGGAAAGCAATTA 1232345 36 100.0 30 .................................... CCAATAATGCGTGGATTGGCTTCAAATTCG 1232411 36 100.0 30 .................................... CCTGCACTGGGGCGGTGGACGGTCTCGGGT 1232477 36 100.0 30 .................................... ATCAGCCGCTTGTGTTTGCATCGGCTTGCC 1232543 36 100.0 30 .................................... ATGCACAAATTCATCAAATTGATAACAACA 1232609 36 100.0 30 .................................... CAAGAAGTATCTGAAATAGATGTACATAAA 1232675 36 100.0 30 .................................... GAATGAAAGCTGATGCTCAAGTTCTGCAGT 1232741 36 100.0 30 .................................... ATGAAAATCGCCGCCGAAGGAGGGCGTTTA 1232807 36 100.0 30 .................................... ATTCAAATGAATCACAAAATTATTATCCAT 1232873 36 100.0 30 .................................... CCTGAATTTGTTCTTATAGAAAATGTTCCC 1232939 36 100.0 30 .................................... AATACAAATGAAAATAGATAAACATATTAT 1233005 36 100.0 30 .................................... CAAATAAAAATGTATAACCATTAAAATCAA 1233071 36 100.0 30 .................................... AATAGTTTATTTTTTATAAACAAGAATTAT 1233137 36 100.0 30 .................................... CAATACTTCCTATTCCTATTTTTTTTATAC 1233203 36 100.0 30 .................................... GTCAAAATAGTCGTAATCCGCTTGTTTTAA 1233269 36 100.0 30 .................................... ACTTGCAAGAATATTACGAAGAACGTTGCT 1233335 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 61 36 98.8 34 GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC # Left flank : GGTAACACCTCCGGGGGTTCGAATCCCTCTTTCTCCGCAGTAAAGGGTGTAAATCAAGTAGTTACGAGATTTACACCCTTTTTTACACCCAAAAATATCGAATGATTTTTTATTTCTTCCCCAAATTGTTCATATTTTTACCAGAACTATGGTTTTAAATTTTCAGATTGGCTCAGAACTAGGCTTTTGAATTAAAAACTTCAATCCATATCTTACTCAAGATATTAAAAATCAAATAATTAAAAATAAAATTCTTATTGATTCCACACGTGTTGTCCCAATAATACAACCCAAAAACATAATTTGCAACACTTTTAACTCAAAAACAGAAAAATAAAGACCTCCCGATAAAGTACATCGGGAGGTTTTGCGTTAAATACAATGTTGTGATTACCCTCCAAATACTTCGTATTCATGAGTTCTTTTGAAAAACAATAAAAACTCACGAATAAAATGAGAGCAGTTCCAACCGTCCATCAATTTTATGAGAAGATTGATGA # Right flank : CATCAATGCTAAAAAATGAGTGTATAAAACTGTCTATCAAGAGTGTAATATCATATATTTTACTTTATCAGTGCTTCTTTTTCCCTTTTAAATACCTCAGCAAAGTACTCGGCGTAGGTTTTTTCTTTTTCTATTTTGCCGTATTTTTCTTGGCAATAGTCCCAAAATTCTTTTTTAGGCAATTGGTTGTGTGCAAATTTATTACGAATATAGGTTAAAACAAAAGCTTTTTGTTCTAAATCGGTTGCTTCTTGTTTTAGTTGGGTGATATTCACTTTTTCAGGATTAGTATTCAACTTAAATACCTTGTAATTCTCCACATTTTCATTTTTAAGCTGTCTTAAAAGACCGTTGAGAATATAGTACTTGAAATTATAATATTTTCCTTGCTTCAAATCGTGTCTGTGTTCTTCCTTAATTTCGTCAGAAATTATTTTCTCCAATTCTTGTACATCTTTTAGCAAAATTTTGCTTCTAACGGTTTCATATTTACTTATTTG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.27, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.40,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], // Array 2 1578515-1569718 **** Predicted by CRISPRDetect 2.4 *** >NC_015846.1 Capnocytophaga canimorsus Cc5, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================================================================= ================== 1578514 47 100.0 30 ............................................... TTTAGCATTTAAAACCAGAATAACTCCCAG 1578437 47 100.0 30 ............................................... CGAAACCAAATTTGATGCTAAAATAAAAAT 1578360 47 100.0 30 ............................................... TACGAAATGATTCAAAAAATACGAAATGGA 1578283 47 100.0 30 ............................................... TTTTCCATTTCCAAAGACTTTAAGTCCAAC 1578206 47 100.0 30 ............................................... TTTCAGCAAAACTTTCAACAGGCAAGTTCC 1578129 47 100.0 30 ............................................... ATATACCCAAACGAAAGGGTTTTCATTCCA 1578052 47 100.0 30 ............................................... TCTGATGTGTTGAGTTGTGATTTGGTACGT 1577975 47 100.0 30 ............................................... ATTAACAATGTACAATTAACAGATGACAAT 1577898 47 100.0 30 ............................................... TCGGTCATTGGCGGCTTGTTGCATTTGTGA 1577821 47 100.0 30 ............................................... TTCGCCACAATCATCGTTTTCGGGCGAGTC 1577744 47 100.0 30 ............................................... CATTAAAATGTCGGCTTCTTTTTTCTCGGC 1577667 47 100.0 30 ............................................... GGTAGTGATGGTATCCTTTCATATACCACA 1577590 47 100.0 30 ............................................... AAGGTAATGGTTCAAAAATCAATCATTTGT 1577513 47 100.0 30 ............................................... TTTGCAGGAGTTCAAAACCCTTTGGAATAC 1577436 47 100.0 30 ............................................... TCACACAGGAGCAGACCCAGCTCAAGGCCA 1577359 47 100.0 30 ............................................... GAAAGTTTATCAAGAATCAATGATTTTGGT 1577282 47 100.0 30 ............................................... GATATATGATTGATAACGGTGAAATTATCG 1577205 47 100.0 30 ............................................... TCATAACAAATAATTTTATAATATTTATAA 1577128 47 100.0 29 ............................................... GATAACTTCCACTAAAGCAATAAGTATGT 1577052 47 100.0 30 ............................................... TCCATAGACATTTATTGTTATATCAGAGTT 1576975 47 100.0 30 ............................................... ACTACCAACTCATCTCCCTCTTTTGGTATA 1576898 47 100.0 30 ............................................... CACAGCTTACCATATCCTTATGTTGCGTAC 1576821 47 100.0 29 ............................................... TCTACATAAATGATGACGTTAAATTAGAT 1576745 47 100.0 30 ............................................... TGTGTAACACGAAAACAAAAAATACCCCAA 1576668 47 100.0 30 ............................................... TACAGATGAGTTCTTAAATAATCAACTGCC 1576591 47 100.0 30 ............................................... TATCAAAAAGACATAACCAAATTCAATATT 1576514 47 100.0 30 ............................................... TCCTGCAAGGCTGAGATCTCTCTTCGTATG 1576437 47 100.0 30 ............................................... TGATATATTAACATACAATTTAAAAGATGA 1576360 47 100.0 30 ............................................... GCAACTGATAATCAAAAACTACAGATTATG 1576283 47 100.0 30 ............................................... ACGCTACAGTTTCAGTGTTAATTGATGCGT 1576206 47 100.0 30 ............................................... AAGCGTCAAACATCAATAAATATTTAGCTT 1576129 47 100.0 30 ............................................... ACCAAATTATGAAATGCTTGTTCGTGATGC 1576052 47 100.0 30 ............................................... TATACTACCATCAGGTGCAATAACATTCAA 1575975 47 100.0 30 ............................................... GGGTCAGCAATGCGGCTGGCAAGCGCCCAA 1575898 47 100.0 30 ............................................... AATCCCTCGTCTCCGAAGTGGTCTTGTGTT 1575821 47 100.0 30 ............................................... AGATTAGCCAGTTCTTCTTTTTCATTGTTA 1575744 47 100.0 30 ............................................... AGCCCTTTCGTGGTGCCATCTTTTTTTACT 1575667 47 97.9 30 .........C..................................... AATATCTCCGTAAAGCATATTCATCATACT 1575590 47 97.9 30 .........C..................................... GTATAAGTATCTCCCACAATGGCAATGTAG 1575513 47 97.9 30 .........C..................................... TTGCAACGCTGGTGGAAATAATTCCAGCTC 1575436 47 97.9 30 .........C..................................... GGCTCAAGGTTTGGGGCATGGTGTTAAAAA 1575359 47 97.9 30 .........C..................................... TACCTTATTTACAGATTGCATCGTCAGAAA 1575282 47 100.0 30 ............................................... TATAATGTATTTTCGTGGTTTGTTTTGTTT 1575205 47 100.0 30 ............................................... AGGGTAAATCTCACGAACAAGGTGGAGAGT 1575128 47 100.0 30 ............................................... TGATTTTGAATTTGTAGATAAAGAGGTAAT 1575051 47 100.0 30 ............................................... TGATAGCCTCCCAGGGGCAAACGATGACCA 1574974 47 100.0 30 ............................................... TTTTGGGTCGTGTATTCCGTTATCTAAATT 1574897 47 100.0 30 ............................................... TGGAGATATTACCACTATTCGACCCCAATA 1574820 47 100.0 30 ............................................... CATTAAACGAGGTATATCTTTTCTAATCTG 1574743 47 100.0 30 ............................................... AATTCTTTCGATAACAATAGACTATAATCG 1574666 47 100.0 30 ............................................... AGTACGAATAACAATGCCAAAAGTAAAATG 1574589 47 100.0 30 ............................................... AAAATGATAAGGAAAAAGAAAATAAGTAGA 1574512 47 100.0 30 ............................................... AGCAGCAAGCAGTAAAACAAAAGAAAGCCG 1574435 47 100.0 30 ............................................... GGTTGAGTTGGAGTAAGAATGATTTCTTCG 1574358 47 100.0 30 ............................................... CAATTTCATCTCGGGTGGAGCTACAGCATT 1574281 47 100.0 30 ............................................... GAACTCTACGCACCGCAATCTACAGAGAAG 1574204 47 100.0 30 ............................................... AGTTTGGGGTTGGAAAGAGCAGGTTTTGAA 1574127 47 100.0 30 ............................................... TCTATCCTTAAACAATATTTATTGCCTTTA 1574050 47 100.0 30 ............................................... CTGAAATTAAAGCGAATGTCAATGTAATTT 1573973 47 100.0 30 ............................................... TAGTTTTAAATCTTTTTCTATATTAAGTAG 1573896 47 100.0 30 ............................................... TAGCGTGTTTAACAAAGTCAGACCCTTATT 1573819 47 100.0 30 ............................................... ATATTTTTTTAAATGTTTCGATGTTTTGTT 1573742 47 100.0 30 ............................................... TATTAACCTACACGTTCCAAAATGGGTCTT 1573665 47 100.0 30 ............................................... TATCACTACCATCACCGCCGAGCGGTTACT 1573588 47 100.0 30 ............................................... GATTGAGCTGAAGTTTCCGCCTCTCCATTA 1573511 47 100.0 30 ............................................... TCACTACCGTTGAAGAATTAGAGGGCTATC 1573434 47 100.0 30 ............................................... TACTTAATCAGCATCAAACAGAAGTAGATG 1573357 47 100.0 30 ............................................... AATGAAATGGCTCGAAACTGACTACCAAAC 1573280 47 100.0 30 ............................................... ATAAGAATAAAGATAATCTCCATTTATAGT 1573203 47 100.0 30 ............................................... TACTAAACCCGCAGTAGCTTCCAAATCATA 1573126 47 100.0 30 ............................................... GGTGCTACCATTGTAGAAACTACTAGTGGA 1573049 47 100.0 30 ............................................... TCTGATTTGCCTATTAAATATATCCGATGG 1572972 47 100.0 30 ............................................... TATTTCTTTTAATCCCTTTGCTATCTCTAA 1572895 47 100.0 30 ............................................... ACAGGTTTTTGGGGGAAATAAAAACAGATA 1572818 47 100.0 30 ............................................... GTGTGGGGTACCTACCTAAATGGTTGTACC 1572741 47 100.0 30 ............................................... AGGCTCTTCAAACACTAAAATAGGTGCATT 1572664 47 100.0 30 ............................................... TCTGTTATTCTCTGCCCTGTTTAGATACCA 1572587 47 100.0 30 ............................................... ACATTTCTTTTGTAAATATATAAAGCACCT 1572510 47 100.0 30 ............................................... TACAACAGGAATGGTTCCTGCTTTGGCTAT 1572433 47 100.0 30 ............................................... GAGATTTTAAACCTAAAAGTGGAAACATAA 1572356 47 100.0 30 ............................................... AAAAAAGAAATTGACGAGTTCTTTAGAAAT 1572279 47 100.0 30 ............................................... CCTTGATAATCTACATTGTAAGGCGGGTCG 1572202 47 100.0 30 ............................................... AGATACTGCCGATGGTACGACGGGTAAAAA 1572125 47 100.0 30 ............................................... TCTTCGTGTAACCTCTTCAAAATACAAAGT 1572048 47 97.9 30 ........C...................................... TTAATATTTTTTTTTGCCCCACCTTTCAGC 1571971 47 97.9 30 ........C...................................... TGGTCTATTTCAATTTACCGAAGACGGTAA 1571894 47 100.0 30 ............................................... CACAAATCCATAGGAAACACACAGGTAGAG 1571817 47 97.9 30 ........C...................................... CATATAGAAATAGAAGAAATCCGCTCAATA 1571740 47 97.9 30 ........C...................................... TAACCAATGTAAAATCCAACCTGCCGTGGA 1571663 47 97.9 30 ........C...................................... GAAGCGGGATCATAATATTCGGCGATCTGA 1571586 47 97.9 30 ........C...................................... AGGTTTCTATGCCAAACTCAATATTGTTTA 1571509 47 97.9 30 ........C...................................... TTTGTTCTTCAGCTGTTTTCCTGAGGTAAA 1571432 47 97.9 30 ........C...................................... TACATCGTTCACCTGTAATTTTGGAGCCAA 1571355 47 97.9 30 ........C...................................... ATACTTTCAGTTGAACAAGTTATACCTAAC 1571278 47 97.9 30 ........C...................................... TGGCCAGTTTATCAGCCATGACCAAGCCGC 1571201 47 97.9 30 ........C...................................... ATTTGTATTTCTCTAAATCTGATTTTATTA 1571124 47 97.9 30 ........C...................................... TTAAATCATACTTACTAATGTTTTCTCCTT 1571047 47 97.9 30 ........C...................................... AAGTGATTTTGATAGGTTTTTAGATTTTGA 1570970 47 97.9 30 ........C...................................... AGAGGCGGTTTATTCTAATAAAAATGTCAA 1570893 47 97.9 31 ........C...................................... TGCAGTATATTGCGAACTCAAAAACAGAGAA 1570815 47 97.9 30 ........C...................................... TGCATTGTGAACAAAAATGTTTTATATTTG 1570738 47 97.9 30 ........C...................................... TGGCCAGTTTATCAGCCATGACCAAGCCGC 1570661 47 97.9 30 ........C...................................... ATTTGTATTTCTCTAAATCTGATTTTATTA 1570584 47 97.9 30 ........C...................................... TTAAATCATACTTACTAATGTTTTCTCCTT 1570507 47 97.9 30 ........C...................................... AAGTGATTTTGATAGGTTTTTAGATTTTGA 1570430 47 97.9 30 ........C...................................... AGAGGCGGTTTATTCTAATAAAAATGTCAA 1570353 47 97.9 31 ........C...................................... TGCAGTATATTGCGAACTCAAAAACAGAGAA 1570275 47 97.9 30 ........C...................................... TGCATTGTGAACAAAAATGTTTTATATTTG 1570198 47 97.9 30 ........C...................................... GAAGACGGCAGCGTCATTCAATCGCAATTT 1570121 47 95.7 30 ........................A...T.................. TAGCGTTGTGTTTTCGCTATTTCTTTGGTT 1570044 47 95.7 30 ........................A...T.................. TATCCATTATGTAATAATTATCAAAATCTA 1569967 47 95.7 30 ........................A...T.................. AGCGTTTATCCTTTATCCGAAAAAATACTT 1569890 47 80.9 77 .........C........................T..G..AGCACT. ACTGAATACCATTGAAAAAAAACTAATGAAGTAAAGCAATTTACAACAAAACCTTTTGCCTTAACAGATACATAGTT T [1569848] 1569765 47 80.9 0 ........................T.........T..G..AGCACT. | T [1569723] ========== ====== ====== ====== =============================================== ============================================================================= ================== 114 47 99.0 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : ACAAATGCTATACGGGTGAAAAAAGACAAATTTCTTATCCTAAAATGTTATGAATTCCGAACGATTTAACGCTTATAGAATTATGTGGGTAATGGTTTTATACGATTTGCCAACCGAGACCAAGGCAATGCAAAAAGCAGCCAATCTCTTCCGAAAACGCTTGGAAGATGATGGATTTTCTTTATTTCAGTTTTCTATCTATTTGAGGCACTGTCCGAGTAGAGAAAATGCAGAAGTGCATAAAAAACGAGTAAAAATGATGCTTCCCAAATACGGGAAAGTAGCCGTAATGACGATTACAGATAAGCAGTTTGGTGATATGGAAATATTCCATTCTAAAGTACGCGAAGATCCGCCACCTACTTACCAGCAGCTCGAGTTATTTTAGAAGTAGAATGAAAAAAATGGATTTACTCAGCCCGATTTATTCTTTTTTTGCTCAATTTTTTATTTCTAAAAACAAAAATAATCCTCTGACAGACAGAGGATTATTTTTTGAG # Right flank : ACTGAACACCATTGAAAAAAAAATAAAAACTAATAAAGTAAAGCAATTTACAACGTTCTTGGGGAAAAGCCCCATAAGGTACTCGTTGTCTTTATCCGCCTTGTAACCAAGTTCTAAAAATCTGATATAAATCAATGGTTTTACTTATAAAGATTTCGATGATTTTGCTTTTTCATTGAAAAAAGAATTCCTAAATTTGCATACTTCTTTATTGAAAAGGAATTTTTTACTTATCTGTTTAATCATTTTTTAATAAATTTTAATTATAAACAATGAATAAATCGGTTTATATAATCACTCCTGATGCTTATAGCGGCAAGTCGTTGGTAAGTTTAGGGGTGATGCAAATGGTTATGCGTAATACTCCCAAGGTAGGTTACTTTAAACCCATTTTGGAGAGTAAAACCCAGAAAGATAATCATATTGCTACAATGCTCGCCCATTTTAATATCGAAATGGAATACGATGAAGCCTACGTATTTACCCGTGCGGAGGTAGCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //