Array 1 24148-23658 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVM01000013.1 Clostridium fallax strain DSM 2631, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 24147 29 100.0 37 ............................. GTACAAAGGTTTTTAAAGCTAATCTAACAGTATTAAG 24081 29 100.0 37 ............................. AAAATGCAAAAACAATTAGATATTGTTAAAAAAGACG 24015 29 100.0 37 ............................. CTAAAACTGTTCCTACAATTCGAGATAGCTCAAATTT 23949 29 96.6 36 .........A................... TAAAATATTAAAAATATATTGTGACCCTGCTTATAA 23884 29 100.0 37 ............................. AAAATGCAAAAACAATTAGATATTGTTAAAAAAGACG 23818 29 100.0 37 ............................. AGAAGGTGTAAGGAAAGGAATTACAAGGATGAATAAA 23752 29 100.0 37 ............................. CTAATATATTTAGAATATATATTATACACCTTAATAT 23686 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 8 29 99.6 37 ATTTACATTCCTTATAGTTAAGATAAAAC # Left flank : AATAAGCCTTACCTATCTTGTCATTTATTTTATTCATAACATCATCAATAGTATCCATTAACAGTGCAAGACTTTCAGAAATATCAATTGATTTATCTGGGAAGTCTTCCTTTATTAAATTTAAAATTTCTTCAAGTTCCATAAAAACACCTCACATTATATAATTACATTATTCTTCATAAATGTAATTACTCCTCCTTTTCTCCAATAATTTATACAAAAAAAAACACCAGATAATATTTATATATAGTGTTCTACAGTAATTGCACTTCTACTTTTTGACATAATACTTAATTTTCTTAAATTTTCTTATTTCTGCTAAGCTCATTCCTAACTTAAATAATTCTACTATCATATCTTCTATTCTTTCTCATAATAGATATATCCTTTCTTAACTAAATATTATTTTACTTAGTTAGACTTAATATGTTATAAATGTAAAATTGGAAATATTATCATTTATACTTTTTAAGTAAACTTATATTAAAATTCACTAATTT # Right flank : CCTAAAATTCTATATTAAATAACAGCTTAAAGAAGCCATTTCTTATGTTGATATTGTACCATATTTAATATTCTTTTGCAGTAAATCTTAAGTAATATATTAAGAATAGACTTATTAACCCTTCTAATCTATTTATACATAACGTTTTAGAAGTATTTCTTTAAAAATTCGATCTACTGCATTCATATTTTTCCAAAAAATACTTTAAGTTAAATAAATCCAATTTTTTAAATTCTAATCATTAGAAAATTCTTAAATATATTATATTCATATTTCTTTAAAAATTTATATCCGAGCCGTGTATTTATTCCATTCTAACCTATAAGTTTAATTTTAAAATCTTAAACTTCATTTCATATTTTCTTAAAAACACTAAAAGCCCTTGAAATCAAGAGCTTTTCATTGTATCAATATTAAATTGATTATTTGGAGGCGCCACCCAGATTTGAACTGGGGATAAAGGTTTTGCAGACCTCTGCCTTACCACTTGGCTATAGCGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCTTATAGTTAAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 41601-40582 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVM01000022.1 Clostridium fallax strain DSM 2631, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 41600 30 100.0 36 .............................. TCGAAAATGTAATCTAACATATTATATTTTTCTTCA 41534 30 100.0 36 .............................. TAATGCAGATGCATTTTTGCAAGAGTTGGAGGAATT 41468 30 100.0 37 .............................. TAGAGATGTAAAAGTATCTATTATACCTTTAAGCTCG 41401 30 100.0 34 .............................. TAAATATAACTGGAATTGCTTGAATAAATAATAT 41337 30 100.0 37 .............................. CTCTTGTAAAGAGCAATTAAGGAATATTAGACAAATA 41270 30 100.0 36 .............................. GATTAGTGAGGAAGATGAAAATTTAAAAAGTCCTTT 41204 30 100.0 36 .............................. AACAATTAATTATGGAACAAGATCATTAAATAATGT 41138 30 100.0 35 .............................. AGCGAAAAAATGTTTTAACGAAATACAAAATATGA 41073 30 100.0 36 .............................. TATGTTCTGTTGTAAACGCTGAATGTGACTTATTAT 41007 30 100.0 37 .............................. TAGAATCTACCTCCTAAACAATGTTTTATTATTTCAG 40940 30 100.0 36 .............................. ACCATTTCTTGTACTGGAAATTTAATAGGTCTACTT 40874 30 100.0 35 .............................. TCTTAATAAATTCTTTATCCATTTCCTTTTTTAAG 40809 30 100.0 35 .............................. CAGAATGTGCAGAAAACTATATATTAAATAATTAC 40744 30 100.0 36 .............................. GTAGAAATATTAGGAAATTATAACTGTAGAACTGGT 40678 30 100.0 37 .............................. ACAGAACGACACAGAAACGACTTTACTTAATAACCAT 40611 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 16 30 100.0 36 GTTTAACCTTAACATGAGATGTATTGAAAT # Left flank : CTTCTGCCCTTACTCATAATGGACACATCCTTTCTTAACTAAATATTATTTTACTTAGTTCGACTTAATGTGTCCACTACTTTATACTAACACCAATATGCGAACTGATTTGATAAATTTT # Right flank : GTACTTAATTTTGCTGCTGCTATCCCTTTCGAAGGTTTAACCTTAACATAAGGTGAACAATATTGAGTTTTTAATTTTTATATTTAATTATAAAATTAAGATGCTTTATTTAGATTAGTTAAATTATTTAAGTACTTTCTAAAAATATTTATTATTTAATATTGTATAAATAGAAATATTTTGTATACATATTAGAGATTAAAACGTAATAATATTAGAAGCTCTAGAAAGTTAATAATTACTTATTGTACAAATTATTTTATGAAGGGAAAGATGATGGATAATGAACTAATTAATAAAATTTTTAAAAAGAAAATGATTATTATATATAAATATTTGATTAAAATTGGTTGCGACGAAAATGATGCAGAAGACATAGTACAAGATACTTTTTTAAAAGCTATTAGATATATTGATGGTATAAATGTAGAAAAAATATCTTCTTGGCTTTTTAAGGTTGCAGTTAATAAATATTATGACTTATGTAGAAAAAATAATAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 41316-42463 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVM01000021.1 Clostridium fallax strain DSM 2631, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 41316 30 100.0 35 .............................. GGGTGGTAAAAGATATGGAATACTTTATGCTGGTA 41381 30 100.0 36 .............................. TTGGTTAAATACAGCAAAGAAATTAGATGCTAGTTC 41447 30 100.0 36 .............................. TAAATAAAAAAAGGCTACCTGTAAGGCAACCTTAAA 41513 30 100.0 35 .............................. TTTTTCTAACATGGAATAATATTTAATTTAAAAAG 41578 30 100.0 36 .............................. TTAATAATTTAATTACTATGGCAAAACCTTCTATGC 41644 30 100.0 35 .............................. GATATGAAGAGTAATAAAGACTATATAGCTGATAT 41709 30 100.0 36 .............................. TGATATAGACAAAAGTGAGATAGTAAGAATGGCGTT 41775 30 100.0 37 .............................. CTATCTTTGCCAAATGCAGATACACTTGCACTTGCTA 41842 30 100.0 36 .............................. AACATTTAAACCACCTACATAAACTTAGCAAATTTA 41908 30 100.0 37 .............................. AAGAACTCTTGTCTTGTAAAATTCAATTGTGTTTTTG 41975 30 100.0 36 .............................. CAACCTAAGGAATCTGGGTCGGCTAATTTACTAATT 42041 30 100.0 36 .............................. AACAAAGATTAAGTGAAGTTTATTGCTTGAATAGAA 42107 30 100.0 35 .............................. TGGAGCAATAGTGTCTAACCTTCATTCCGTCAATA 42172 30 100.0 36 .............................. GAAATATCTAAGTCTAGAGTTTTATTAGTTCCCATT 42238 30 100.0 36 .............................. TATTTTAAATATGATGATGATGAGTTTTCTGTCAAA 42304 30 100.0 35 .............................. CAAGATCCTTTAATAAAAGTCTTAAAAGGGGATGA 42369 30 100.0 35 .............................. TTTTATTCCTCCTTCTGTTCTTCTGTATCTTTTAC 42434 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 18 30 100.0 36 GTTTAACCTTAACATGAGATGTATTGAAAT # Left flank : TTCTTTAAAGGAGAATATGTAAAATGGCATCTAATAAAAATATAAATTATAATTATGCTTTTTTATTTTATGATGTGGGAGAAAAAAGAGTTAATAAAGTTTTTAAAGTATATAAAAAATATCTTAGTCATTTTCAAAAATCTGTATTTAGAGGAGAGATAACTCCATCCAAATTAATGAGTTTAAAAAGAGACTTAAATAAAATTATAGAAAAAGAGGATGATTTTATATGCATAATAAAACTTCTTAATAATAATGTTTATGGAGAAGAAATATTAGGAAGTTGTGATGATAATGGAGAATCATTAATCTTATAATTTAATTTATCCCAAGCTAAAATAACTTAACTATTGTTTAAACATTGACAAATACTTGTTTTTCACAATATTATATATTAAAATTAAAATGTAATAATTAACTTGGGATAAATATTATATTTAATATTGAATTATCTATGTTACAAGAAATTGAATAATGTATAATTTGGCTTGTTTTCAGTG # Right flank : | # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 72678-73164 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVM01000006.1 Clostridium fallax strain DSM 2631, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 72678 29 100.0 36 ............................. TATGCAAATGAAAGTTTATATTAAATTAATTTTAAA 72743 29 100.0 36 ............................. ACACCTATCTTTGCCCATTTCACAATTTCTTGCAAA 72808 29 100.0 37 ............................. GCGTCTTTTGCAGATAATCCAAAAGCTGTCAACGTAT 72874 29 100.0 36 ............................. TACAAATACATTTCAGCTACATCAGAATTAACTTCA 72939 29 100.0 36 ............................. TTTTAAACAGGGGGATTAAATGAGAAAAGAAGATAT 73004 29 100.0 37 ............................. AAGAAACTAGCTACTCCACTACCTGCTTTTATTAATC 73070 29 100.0 37 ............................. GTACGTGGAGCAAGTATTAATTTAAAAGAAATATAGT 73136 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 8 29 100.0 38 GTAATAACTTAACTATATAGAATATGAAT # Left flank : GTATAAAATCTAATTTATTAGTCAATTATTATAGATAGTAATAAAATTGGAGTGATTAAAGTGTATGCAATAAGAAAAAATCATATTTATAAAGCAATTAAAATTAAACCTAATAAAAGAGAAACTGCTTTATGGTGTAGGTTAGATAATAGTAATAAATATTATTTAATATCAACGAAAAATTTATTTAACAATTTTATAGATGCTTTTAATCATTTAAAAAGAAAATAATATTTAACAAGTTAAGGCGATTCAACGTCTTTGGTTAGAGGATTATATCACTCGGCAAAAGGGTTAATGTATGTCAATATGTTACCGACATACTATTCTAAAAAATAATTTTGCAGTAAATCAAATTTTCATTAAATATGCCTTAAAGTTAGTTGCATCAATATATTACATGTATTTTTAATTTTGTTAATAAAATATTACTATAGAATTACTGCAAAAACTTTCGTTTTAAAGATGAATAATAGCACTATAACTATATTTACATTAGG # Right flank : TCATTCAAAGATTTTTATATACGAACTGATTTATAAATTAGAAATTTAGCTATATAAAAGGAGTACTTAATTTTGATAACAGTTAGAAAATTAAAATTATCTATAATGGCAGATGAAGAATTAAGAATACAGCAATTAAAATGGATAAAAGATGAGCAATATAACCAATATAGAGCATTAAATAATGGAATGGCATTTTTAATAGCAGATCATATGTTAAATACAGCAGAAAGTACTAAAATTATTTATAAAAATAATGAAATTAATAAAAAAAAGAAAAAAATTTATTATATGGAAGATAAGATAAAAAAAGAAAATAATAAGCTAGAAGAAGAGAAAATTTTAAAATTTGAATCAGATATAAATAAGTTAAAACATGAGATAAAAATATTAGAAAATGAAAAAGTAGAATTAGAATTAGAAACTAAAAACTTATCAGAGCAATTTAAAAATCATTATGTGGAAGATATGTATACAAGGCTTGATGAAATTCCATTTCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAATAACTTAACTATATAGAATATGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //