Array 1 56274-59202 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEIMH010000005.1 Streptomyces sp. N35 Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================== ================================================================================================= ================== 56274 21 95.2 73 ...............T..... TGGGAGTACTACACGTCGATCGTGAAGTGCCGGGCGGGACGTCTGACGACCATCCGCACCGCTGTACTGATAG A [56291] 56369 21 81.0 37 ..G........A...C....A GCGGGACGTCGACCCCGTCAAGCGCGGACTGAAGGTG 56427 21 90.5 40 ..GG................. GAGGGACATCGCCATGGTGCTTCCCCTGTTCGCCGCCCAG 56488 21 90.5 85 ..C.............G.... ACGTGTCGTCGACCTCACGTCCGCCACTGCGAGGCAGTACGCGGGGAGGGTCATGTCCCGCTCATCCGTCCACTCGGCGCGGCGG 56594 21 81.0 40 .......T...AC...T.... AGAGGACGCTCCGTCCGGAACGAGGGTGAGCGGCGGGTCA 56655 21 76.2 50 ..GC...T..A......C... AGAGATCTTGTCGACTCAATCAGACCGAGATCAACACGTCGCCGACACTG 56726 21 76.2 33 ..GGT........G.....T. CCAGCCCGGCACCGCGGCGATCCCCATTGCCAC 56780 20 81.0 40 ..AG.C.-............. GCTGGACGACGTTGTGCATAGGTCATCCGGCTCAGGTCAG 56840 21 81.0 39 ..G.........C.....AC. AGAAACTGACCGTCGGTAGCGGTGGCGTAGCGGTCGTAG 56900 21 76.2 39 ..C.......T..GTT..... TAGGACTTGAGGTCGTCCCAAGCGAAGCTCAGGGCCACG A [56918] 56961 21 85.7 58 A.A..............A... TCGTCCGACAGGCCGGGTAGTCATCCGGCGGGCGGTGCTCATCGTGACGCCGGGGACG 57040 21 71.4 44 AA..........C.....CAC GAGGGCAGGATGCCTGTGCGTTCTTGATCTGGTCGGCCCGTATG 57105 21 100.0 35 ..................... GCGGGACACGCGGTACCACAGTCGGCAGCGCCATG 57161 21 81.0 40 .CGC........A........ CCAGAAGCTGCGAAAGGGAGGCATTGCTCTCGGAACCCTG 57222 21 95.2 38 ...............C..... CGGGATGTCCCAGTAAAGTCCATCATCTCCGTGGGGTG A,A [57237,57241] 57283 21 81.0 40 ..GG...T....C........ ACGGGACAGTTCAGTGATCACATGGGACGCTCCACTTGTG 57344 21 95.2 39 ...C................. TGGGACAACAACAAGGCGTTGGCGTACTACCGCAACACC 57404 21 95.2 36 ...............A..... GACACCTGGGTCAAGGGCGTCGACAACGGACGGCAG 57461 21 90.5 39 ............A.....A.. CGGGACGCGATGACCTTGTCCGCGTACCAGCCAGCGTTG 57521 21 85.7 39 A..........A.G....... CGGGACGAGGCCAGCCGCAAGACAATGACCACGACCGGC A [57540] 57582 21 100.0 40 ..................... GCAGGGCCTCGCGAGCAACCCTCCTCTTGGGCAATGCATC 57643 21 90.5 40 A............G....... GCAGGTCATGGTGCACCAGGGCAGCGAAATCAGCGGGTTG 57704 21 71.4 37 ACG.........A..C.T... CGGCTTCCACCAATCCTTCGACGCTTCGCCGAACTCG 57762 21 90.5 39 C.............A...... CGGAACACCGCCGGCTCGACCGGGGTGGGCTCCCCCATG A [57781] 57823 21 81.0 96 ..C........A..TC..... AGAGAAAGCAACTTCAGCACAGAACTCGGCCACCGCAAAGGAACATCCGGTCCGCGACGCGGGCTCCTGCGGTCCCCTCGCCTGCAGTGATCAGCG 57940 21 85.7 39 ..GA.............A... TGGGACTTCGGCTGGCCGGTGCTCGCGAAGTTCATGACC C,A [57951,57953] 58002 21 81.0 40 ..C..............CAT. GCGGGACATGCCAGGCCTGCAGCCCACCTTGATCAGGAAG 58063 21 90.5 38 .AG.................. AGGGCCACAGCGGGGCCTTGAGGTCGATCCGCCCAGAC C [58079] 58123 21 85.7 97 A...........C...T.... TGAACGGACATCCGGCGAGACGGAGGTTGACCATGTCTGGATTCCCGTGTGCCGGGGCCTGGACGTGTCGGCGATCTTCGAGGCATCCACCGGATAG T [58139] 58242 21 76.2 37 .AGG......T......A... CGGGACGCTGTCCGGAGGGAAAGCGACCGCCGGATTC 58300 21 81.0 40 ..G.T.............CC. CGGAGCGGGAGGGTGAGCCCTGAGTATCGGCTGCGCCCGC T [58316] 58362 21 66.7 40 .AGCT..T.........C..A GCGGGACCTGAACCCCTAGTACGCCGCGAAGATGCTCTTC 58423 21 81.0 39 C.C............A..T.. CGGCACAAGCTGCCCGCCGATCTGTCGGCCGGCCTGCGC 58483 21 85.7 32 ..............T...AC. AGCGGGCCGTCTCGAACGCGATGAAGGGCCTG A [58499] 58537 21 95.2 39 ...............T..... CGGGATTCTTCATGAAGCGAGACCGGCAAACCCGAGTCC A [58555] 58598 21 95.2 86 ............G........ CGGGACACGATCATCTCGGCGACAGCGGTCTCGTTGAACGGTTCGTGCCTGACGTCGGACAGGTCGGGCAGTCATTCGGCGGGCGG A [58616] 58706 20 85.7 97 ..C....-.....G....... GCGGCGATCTGCTGGTCCGCCGGCTCGGTCCACCTTGAGGTCATCCTGCACGCCAGGTCGGGACATGTGTGGGGTTTCGATCGCACCCGCCGCGATC 58823 21 95.2 39 A.................... CGGGACCCTTTGCCCAGGGCCTGCAGCGGATCGAGAGGG C [58839] 58884 20 85.7 39 C......-.......C..... CTGGACGTCGTGGTGATCCAGCCGTCTGTCTCTAGGCGG A [58899] 58944 21 85.7 39 C...........A..C..... CGGGGTCCCTGGCATACAACCACCGCTTGGATCAAGCAG A [58959] 59005 21 95.2 40 .................C... GCGGGACGCGTCGATGACCGCGAACACGTGGGCCGCGTTC 59066 21 90.5 95 .AC.................. TGGGAGTCGGCGGCCGCCACCTGCTCGTACGAGCCGCTCATCTCCGCATGTTGGGGCGGGACGACTGGATGGATTGGCAACTCAAGATCGAGCAT 59182 21 95.2 0 ..C.................. | ========== ====== ====== ====== ===================== ================================================================================================= ================== 43 21 86.1 48 GGTTCATCCCCGTACGCGGGG # Left flank : CCCGCACCGCGTCCTCGATGGTGGGATGCCGCTCGGCGAGTGCTTGCACGTGCCAGAGCGGCCATGTTCCGTCCTGTAGATCGTGCTGCGCGTGCATGGTTCCCAGGTACGTGTGTTGCTCATACGCGCACCAACTCGGCCGTTCGGTGTCGATGGGACGAACGAACTGGACAGGGACCCCGTCCACGGCCTGGCAGAAGATGTCCTGCCAGGCTTCGGGACGTACCCGCTGCGATGACGCGTGGGTTGGCCGCTCCACCTTCATGTCCTCTCGAATCTGACAACGCTTGCGGATGCCTCAATGCGGCACGGTTCATGGGGTGGGCCCCCGCGTACGGCGGGGCAGGACGGGGCGATGAGCACGTGTCCGCCATGGGAACGGCAGCGTCACCCCTTAGCCGGAGGACTGATCGAAGTTTCCGACGTGGCACTCAGCCAACGACGCATCCCCGTGTTCCGGGGCGTGTTCGCTGTCGGGCATCGCGGTCGTTTCGACCACG # Right flank : GACGGAACACCGGAGCTACTGAGCGTGACATTCGCGCGATCGGTTCATCCCCGAACGCGGGCGGGACGCCGCGAATGGGCCCTGATGAAGCTGCTCACCGGTTCACCCCCGTACGCGGGGACGGAACGAGGCTTTGCTGTCGGCGTACCCCGAGGCGGTGGGGTCATCCCCACACGCGGGGCGGGACCAGGCGGCCTCTTCGAGGAGCTCGCCAAGGAGGGGGCATTCCCGTACGCGGGGGCGGGACCGCTTCGCGTCGCGTCGGGTCGGCTGCCAGATCGGCTCATCCCCCACACGCGGGGCGGGCCGGTGGGTCGCCAGCGCAAGGGCGGCCCCGACGTCGGTACGGGGCATCCCGCCGAGCTCGAGCAGCAGGGTGACCCGATCTTCACGCAGGGGCCATCCCCGACGCGGGTACCGGCCGCCCAGACCTTCCCTTGCACGGTCCAGATCACGGGTTCATCCCCCTACGCGGGGCGGGACTCGATCCTCACCCGCGA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.30, 5:0, 6:-0.5, 7:-0.74, 8:1, 9:0.07, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCATCCCCGTACGCGGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [51-53] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //