Array 1 10296-16203 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIST01000024.1 Acinetobacter towneri strain AeBJ009 NODE_25_length_19517_cov_14.578_ID_142982, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 10296 28 100.0 32 ............................ AAGTACACTGCCAAAGGAATGAGATCGAAAAT 10356 28 100.0 32 ............................ ACCACCAGAAGATTATTAGATTTTATCAACGT 10416 28 100.0 32 ............................ TTGAGTGTTGATACAGGCATGAAGCTGATGGC 10476 28 100.0 32 ............................ TTCGGAACTGTTTTACCTGAATAGCAGGGATA 10536 28 100.0 32 ............................ TGACTTATTTTTGTCAGTGCAAACCTTAAATT 10596 28 100.0 32 ............................ AACCAGAAATGGCGTGTATCATTCGGAATGGG 10656 28 100.0 32 ............................ AAACCGTATGCAGATTGCTGAATACGCATTGA 10716 28 100.0 32 ............................ AAAGTCTGTTTTTCGATTTGATTCAGTTCTTC 10776 28 100.0 32 ............................ TATGAGCATTCGTATCATTTACGATAAATTTG 10836 28 100.0 32 ............................ ATTGCAAGCCTGGAATAAGGACGAGCAATAAA 10896 28 100.0 32 ............................ AGTGCCGCCACAATTGTTGAACGTCTATACGT 10956 28 100.0 32 ............................ TATCTCGCAACTTTCGCCAAAGCGTATCAAAA 11016 28 100.0 32 ............................ AAGACGCCAACAAAGGCACAAAAACCCTAGAA 11076 28 100.0 32 ............................ TTAGGTGAAACTATTGATCCTGTAAACGGCGC 11136 28 100.0 32 ............................ TGTATCGCGGTGATATGGGATCAAATCAAGCA 11196 28 100.0 32 ............................ ATTACCACTAACCACACTGTCACCATAAGAGC 11256 28 100.0 32 ............................ ATCATGATTACAACAGGCTTAATTTGTGTAGC 11316 28 100.0 32 ............................ AAAATTGACTGGAACTTGGATAGGAGCAGGAC 11376 28 100.0 32 ............................ ACGTGGTGGAGTATTATTCCTTTGCTTACTCC 11436 28 100.0 32 ............................ TACTGATTTCCCGCGTTTTTCGGGATGTATGA 11496 28 100.0 32 ............................ AAAAACGGTACACAGAACCTAAAAGGAACTAA 11556 28 100.0 32 ............................ AGTTGAATACATCGAGTCAGATTTTTGGTGGT 11616 28 100.0 32 ............................ TTTAATCATAGAAAGTTTGTTTTTACGATCTT 11676 28 100.0 32 ............................ TTTCAACGTCAAGCAATACAAAGCATCCGACC 11736 28 100.0 32 ............................ TTGCAGGATGCTGAAGTTGATGCGACCTTATG 11796 28 100.0 32 ............................ AGCAAGAGAATTGGCATAAAAAACATAGCCAA 11856 28 100.0 32 ............................ AACAAGCGTTTGTCCAGTGCTCCCAAGCAAAC 11916 28 100.0 32 ............................ TGTTCAGTGCATTGAAATGTATAGGTTTGTTC 11976 28 100.0 32 ............................ TGGTGCGATAAGTGTTGTCATTTCACACTCCC 12036 28 100.0 32 ............................ TGCGGGTGGGGATGTTGTGGATGCAATAGATG 12096 28 100.0 32 ............................ ATTCGGTTAGCCATGTTCAAAGCAATGATGCA 12156 28 100.0 32 ............................ CTGCGGTTAGACCAGACATACCATTATTGTTC 12216 28 100.0 32 ............................ TAGACTAAAACCAATATTCCCGACTAAGCCTG 12276 28 100.0 32 ............................ TATTGTTGGTATGGATAACGTAGTGGAATCAG 12336 28 100.0 32 ............................ TTGTGTTGGTTGAGCAAAAGTTAAATCAAAGC 12396 28 100.0 32 ............................ AAATCCGATTGAAGTATGGATCATAAGCAACA 12456 28 100.0 32 ............................ TTTGCTGAATTGAACATTAGTAATCCAGCTCC 12516 28 100.0 32 ............................ ACACCTGGCAGTCTTTCAGGTCAGGTACTTCA 12576 28 100.0 32 ............................ TCACCCAAGAAATCATCATCTGTTAAGTGATA 12636 28 100.0 32 ............................ AGCCAAGTTCAAACTCGTATTCATTCCGAACA 12696 28 100.0 32 ............................ AAAGATAAGAAGTTGGCACAGGATTTATCGAA 12756 28 100.0 32 ............................ TGTTCACTCATGGATGATAGGAAGTTTTCAGC 12816 28 100.0 32 ............................ TCAATTACACCATGATAAAACAGGTGATTTAG 12876 28 100.0 32 ............................ ACACCTGGTAGTCTTTCAGGTCAGGTACTTCA 12936 28 100.0 32 ............................ AGCACCAGTGACACCACCACCTACAGGCGGTA 12996 28 100.0 32 ............................ TACGCCGTCTATCGTAGACCGCCAGATCATCA 13056 28 100.0 32 ............................ TTCGTGGTTTACCCATGCCATATCACCTGAAA 13116 28 100.0 32 ............................ ATATCGTTGATGGTCGCCTTGATAGCGAAAAA 13176 28 100.0 32 ............................ AAAACAGACTAGAGCAAGAAATTGTGAAGCTT 13236 28 100.0 32 ............................ TGTTCAATGTCGTTTACCTGCTGATAATGAGA 13296 28 100.0 32 ............................ AATCAGCAGGAGCAGGATGTATAAAATCGCAT 13356 28 100.0 32 ............................ TGAATAGCAAGCAGGCAATTGCTCTGGACACT 13416 28 100.0 33 ............................ TAAAACGGAAGGTGGTATTCAGCTTAAACCCAT 13477 28 100.0 32 ............................ TAATTTTACTTCTACTGTGGTTGTCACGGAAG 13537 28 100.0 32 ............................ ACCCTTACCACCCTGTTTTGTCGTTGTTGTAT 13597 28 100.0 32 ............................ TAGACCACCAGCCCACTTAGATAACATGGCAT 13657 28 100.0 32 ............................ AATATTGAAATGTTTGGGCTGCGCACACAAGA 13717 28 100.0 32 ............................ ACTGAGCTTTAGTGTGGCCGTATCACTTATTA 13777 28 100.0 32 ............................ ATTACCAGTCTTACCATAAGTCACTTGGTATT 13837 28 100.0 32 ............................ AAGTGAGGGTATCGAGTACTTTGATACTGAAA 13897 28 100.0 32 ............................ TTTGTGATAATGCCCGAACCTCCGTTACCTCC 13957 28 100.0 32 ............................ CATCTGGACTAGGTACCACAGCACAATTTACT 14017 28 100.0 32 ............................ TAACTCAGGAGTTGTTGGTGTGTTGTATAAGC 14077 28 100.0 32 ............................ TGCCATGACAGAGCAGCGTGAAGCTTTTGAAA 14137 28 100.0 32 ............................ AGCAGCTGCTTCAATGCAGCTTGTTTTTGCTT 14197 28 100.0 32 ............................ ATAACGTGGATTGGTAATAAAGTCTTTAATCA 14257 28 100.0 32 ............................ AGTTATTTTTGAGCCTCCATTAGATTTGACGG 14317 28 100.0 32 ............................ ATCGGCATTCTGTATAAGTATTTAAACTTAAA 14377 28 100.0 32 ............................ TTCCGAGACATCTTTACCAACTTTACTAGAAA 14437 28 100.0 32 ............................ ACAAAGACGCTATTAATCAAATCGCAGAGCTT 14497 28 100.0 32 ............................ ACGCTACCAATGCGCTTAAAGGTCATGGCGAT 14557 28 100.0 32 ............................ TATAAATCTGCTTCGGCTCATACCAGTGTCAA 14617 28 100.0 32 ............................ ATTATAGAAAAGAATATGAAGACTTAACAGGA 14677 28 100.0 32 ............................ CTGCGGGCGTTGTGGGTGTCGCTGCTGTTACA 14737 28 100.0 32 ............................ TTTCAAGACAAGTTGCAAATCTACAAATCCAC 14797 28 100.0 32 ............................ TATCATGGTGCTAAGTGGTGTTTTGATCATGT 14857 28 100.0 32 ............................ ACTACTGTAATCATTCTCCAGTGCTGTTAAAT 14917 28 100.0 32 ............................ TTCCAGTGACTTCCGAAATGCAACCTCATCTT 14977 28 100.0 32 ............................ TTGATGTTTGGCGAACTGACTAAGCCAAAGCC 15037 28 100.0 32 ............................ AACAACACCCGCAGGCGAATGAATACGCTTAA 15097 28 100.0 32 ............................ TACCATCTCTGTACCTACCAAACCACCTGAGA 15157 28 100.0 32 ............................ GAGTTCAACAAGAGGGCTGGTGTATGAAATTT 15217 28 100.0 32 ............................ TGATGTGGATACGCCAATTTTGACAAATTGGG 15277 28 100.0 32 ............................ GTGAAGCCATATTCGTCGTTACCAGTCATAAA 15337 28 100.0 32 ............................ ACAAGGCCCATTCGGTGAAATTGAATCAATCA 15397 28 100.0 32 ............................ TGCATCTGTCATTCGAACCCGAAACACACGAC 15457 28 100.0 32 ............................ ACGGTCATCCGACCAATCAAGCATGATGGTTG 15517 28 100.0 32 ............................ ACTACATCAAGATATGCTGTGGTGCTTGCTAA 15577 28 96.4 32 ...........T................ ATAATGTGTTCATCAGCAGCTTTTAGCATTTG 15637 28 100.0 32 ............................ CTGTGCCCCACCAGTTGTAATCATTCGGAATG 15697 28 100.0 32 ............................ ACGCATTCTCATATGCCAAACCCTAGTAGTTT 15757 28 100.0 32 ............................ TGCTGAGTTATCACCTGCGCTCGAACATTTGT 15817 28 100.0 32 ............................ TAGTGAATTGTTGGCACTTACAATGCCGTCAT 15877 28 100.0 32 ............................ TCAGTATTTTGAGCTTGGCGCTCAAACATACA 15937 28 100.0 32 ............................ ATCCACCCATAATTTGGACACACCACTCATAC 15997 28 100.0 32 ............................ AGTATGGTTGCAAAGGTATTGGTGTAAATTAG 16057 28 100.0 32 ............................ AGTGCAGCCGTGGCCAAAGCCTGAATTACCGC 16117 28 96.4 32 .............T.............. TTTTGGTGGCTTTCCAGCTGCAAATCTAATTT 16177 27 89.3 0 .............T..........-..C | ========== ====== ====== ====== ============================ ================================= ================== 99 28 99.8 32 GTTTGCCATCGCCCAGATGGTTTAGAAG # Left flank : GCCGTTGGGCAAAAAGTCTCTATAAACAACTTGCATCGGGTTTAAATTTTGAATTTAGCCGTGAGGAAGGAAAAGGGTCGCATGAGTCCTTACGTGATATTGCCAATAGTTATCTAGATCATGGTAATTACATTGCTTATGGTTATGCTTCTGTCACACTAAATGGTATGGGAATAAGTTTTGCCTTACCTATTTTGCACGGTAAGACACGTCGTGGTGGTTTAGTTTTCGATATTGCAGATTTAGTAAAAGATGCTTTTGTTATGCCACAAGCGTTTATTTCTGCCAAAAATGGACATAATCAAAAAGAGTTTAGAATGCAACTGATTGAATCCTGCCAAGATCAGGATGTCTTAGACTATATGTTTAACTTCATTTCTGAGCTATGCAATAAAATCAAATGATTTCAAAAGTTTATTGATTTTTGTTTTTTTGATCTATTTTCACTCTTTAAAAACCTATATCATTATTATCTAGAGCTTTTTATGATAAAAGTTCTA # Right flank : CATTACACCCCTTATTATCAATCAAATTAATTTTCAAAGTAACTCTAAATAACGATGCACCCAATCAACCGAAATGCGCTCTTGCTCTAAACGCCTATTTTTAAATGTCTGTGCACGCAAATCATGAAATAATTTTAACTCGTCAGCAGTGAGATATTGTGGCTCACTAAAAATAGAGTCTGGTTCATCCACCATATGATTTTGGAACTGTAACACTGTGGCTTCATCCATCATTAAAGCAATCACGTGTGGAATTTTTTGCCGAACCATACTTAAAATATTTAAACCTTCAGAGTCGATATCTCCCCAATAAAAAACCTGTTTATACTGTAACCACTTGGCCTTCATCCATGTAATATTTTTACCCCCACCACAAACCACAATACTATTTTCCAAGTAAGGGCACGCTAAACCTGACTGAATATTTTCAACTACAATTATTCGTTCCGCAGGTAACTCAAATTGATCTAGCACCTCTGTGGACAATTGAAAAACGGGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCATCGCCCAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTGCCATCGCCCAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 9353-15322 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIST01000035.1 Acinetobacter towneri strain AeBJ009 NODE_36_length_15473_cov_12.0455_ID_143004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9353 28 100.0 32 ............................ TGCAGCAACCAATGAGCAAAATAGCTCATCAA 9413 28 100.0 32 ............................ TGAAGTTCAAGCAGAAACCACGGAAAAAGGGA 9473 28 100.0 32 ............................ AGTTATCGATCAATTGGCTGCTCAAAAAAGAA 9533 28 100.0 32 ............................ ATGGGAATCTAAACAAGAAAGGCGATCAAAGG 9593 28 100.0 32 ............................ TTACTGGCTTATCCCAATTCTGATGAGTGTCA 9653 28 100.0 32 ............................ AGCACCAACGCCGTCCACTACCCACGCATACT 9713 28 100.0 32 ............................ TTACTAAAATTTAGATTAGGCAGGGGCATCCA 9773 28 100.0 32 ............................ AGGCAAACGTGCAGATATTTCTATAAATAAGT 9833 28 100.0 32 ............................ GAAAAATTGGGCAACTAACACCCTTAAGGCTG 9893 28 100.0 32 ............................ ACGTACAAACCTGTGGTATTGATTGTTTTTTG 9953 28 100.0 32 ............................ GTACCCCATGCCTTCTTTGCCTGTTATAAACT 10013 28 100.0 32 ............................ GTGGGAAAATCTTAAACACATGGGAAGTTGAG 10073 28 100.0 32 ............................ AGAGAAAGGATAGTTTTGATCACTAAACTTAC 10133 28 100.0 32 ............................ AAGTATTGAGCCAAGACAAAAAGACAAAAAAG 10193 28 100.0 32 ............................ TCTACCTACAGCCACTTGGTTGCAGCATTTAA 10253 28 100.0 32 ............................ TATAACACACAAAATGATAGTTTTCAATACAA 10313 28 100.0 33 ............................ CAACATTCGAGCCAATCAAGCCTCAAACTTTTG 10374 28 100.0 32 ............................ TTATGGTTTGGGTGGAATTCGTTATACCAAAT 10434 28 100.0 32 ............................ GTTGCGGTCATAACCATACGGCGGGTGCGAGT 10494 28 100.0 32 ............................ TGGTGCAAATTGTTCACCGTCACTTGCTTAAA 10554 28 100.0 32 ............................ AGTACCCCTAATGCGGCCACAGCAACAGACAA 10614 28 100.0 32 ............................ CAATGTTCTCTACAGCTTCATCAATTTCATCA 10674 28 100.0 32 ............................ TGTTTTATCATCTAAAGAAGTGCTATTCAATC 10734 28 100.0 32 ............................ AACTGAGGAAGTGGCAAACTCAATGTGGAAGA 10794 28 100.0 32 ............................ ACCTCCATCTATCCAAGAGTCAGCCCTTAACA 10854 28 100.0 32 ............................ AACCTAGAAAAACACGAGGTGGAGCTGTTAGA 10914 28 100.0 32 ............................ TGCAGGATGCTATTAATCTTCTGCATAGCAGC 10974 28 100.0 32 ............................ ATCCAAATATCCATTTGCGGATTTTTCTGCTT 11034 28 100.0 32 ............................ AATGTTTTGCCAAAGCATTTACAGCAAATGGA 11094 28 100.0 32 ............................ AAGTTGTCAAGTTATTCACCTATAAGTTTACA 11154 28 100.0 32 ............................ TTGGGGACACATCAATTGAGCCTAAATTAAAC 11214 28 100.0 32 ............................ TGACTGACACACCTGACAAAACCTGGCGATCA 11274 28 100.0 32 ............................ ACCCTGTCACCATGTATGGCGAACTGACCGAA 11334 28 100.0 32 ............................ AAGCAGCAATAAAGCCAGTGATATTCGAGTGA 11394 28 100.0 32 ............................ ACACACAATAGGATTTCACACATGAATCTTAC 11454 28 100.0 32 ............................ ATTTGCTGCTGTTGTTGCATCATGGCCTGCTG 11514 28 100.0 32 ............................ CTACCCAGATCATCAAGGCAAGCGCAGCAAGA 11574 28 100.0 32 ............................ GAATACTTTACGCAATGCTGCGACCACTTGTT 11634 28 100.0 32 ............................ GACTCAACACCCGCAATGATTTCCTGTGCCTT 11694 28 100.0 32 ............................ GAATGGTTACAGCAGGGAGTGCAGCATGACAA 11754 28 100.0 32 ............................ TACTAAAAAGAATGAATATATTATATTGTGGT 11814 28 100.0 32 ............................ ATATTTTACCTCCTCAACAACCGCAGCTAAAA 11874 28 100.0 32 ............................ TTGAAAGTTCTTACTATGTCCGAACTGGTACA 11934 28 100.0 32 ............................ TTGGGTGTAAGTGTTGCCACCTGTAGCCTGAA 11994 28 100.0 32 ............................ ATGAGTGTGGGAATCAACTCGTTATATTCCTT 12054 28 100.0 32 ............................ ATTAACAAGTAGTCATCTTCGCCTGACTCATA 12114 28 100.0 32 ............................ AATGAGTTACACACAGGACAGTGGGTAGGTAG 12174 28 100.0 33 ............................ TTACAGCAGTAATTCAGGGGCAAGGCGCTATTT 12235 28 100.0 33 ............................ TGAAAGGCAAGATTCCAGCACAAAACCTTTGGT 12296 28 100.0 32 ............................ TTATGGCCAATCATTCTCGCCAAGTCTAAAAC 12356 28 100.0 32 ............................ GTGAGTTGATGGGGAAAACAGGACTGTCTGAA 12416 28 100.0 32 ............................ TTGCAAACAATTCCATCAGGTTTAGTGTCAAC 12476 28 100.0 32 ............................ TATGTTGATTACCAAAAATCTCTCCACTGGCT 12536 28 100.0 32 ............................ TTTGCGCGCTCAAATTGCAATCTAAATGCATT 12596 28 100.0 32 ............................ GTTAAAAATCTCGGTGACTCAGCCAAGCAAAC 12656 28 100.0 32 ............................ GTGCGAAGCACCAGGACCACCTATCATGCCCC 12716 28 100.0 32 ............................ TAAGCCAAGTACAAAAGGTACAACACTTGCAT 12776 28 100.0 32 ............................ TTTGTCTGCATCACGATTCAACTGCACTAATG 12836 28 100.0 32 ............................ TCATTAAGCTGCTGACCAAAATAGGCTGCCAT 12896 28 100.0 32 ............................ AAGATCATTGCCAACCTTTTCAGGCACTGGCG 12956 28 100.0 32 ............................ TGATCACGATTGAATGTAATTGATGTAACTTT 13016 28 100.0 32 ............................ AAGATATTCCAAGCATCGAATACTACAAGGAA 13076 28 100.0 32 ............................ TGAATTCGGTTTTGCAGAGTTGCACAATTTTT 13136 28 100.0 32 ............................ AAATGGCGGTAGTGTGCCTATTGTGATTGTGC 13196 28 100.0 32 ............................ TGTTGAGGTATTGGCTAAAGTCACTGGGCATA 13256 28 100.0 32 ............................ ACAAAAATACTTCAGCAGGCACGGTTTACGTC 13316 28 100.0 32 ............................ TTGGTGTAACCCAATAAGGTTTGAGCCAAATC 13376 28 100.0 32 ............................ TTGCCATGGATATACGGCAGTGCTGATTTTGC 13436 28 100.0 32 ............................ AGGTGTGGATCAGTACAAATGCAAGTTTCGAT 13496 28 100.0 32 ............................ CACTCAAGCCAGAAGATGCATTCAGTAAGACA 13556 28 100.0 32 ............................ AATACCTCGGGCGATCAGATTGGTGAGTAATT 13616 28 100.0 32 ............................ AATACCTCGGGCGATCAGATTGGTGAGTAATT 13676 28 100.0 32 ............................ ATCCGCATTCCAGACATCCACTGCAGTTTTAG 13736 28 100.0 32 ............................ TTGAATTACGCGCGTTCTAGCGCGAGCCCGAG 13796 28 100.0 32 ............................ GTGGCGGCAATTGGAACAATGCGGCCAATGCT 13856 28 100.0 32 ............................ TAAGTCATTCACTCGATACAAAATCATTGGGT 13916 28 100.0 32 ............................ GTATTATCGGGCTTAAAGTTCAGGTTTAGATT 13976 28 100.0 33 ............................ TCGGTTAGTTTTGATCTGCCGTTTCTGGTGCCT 14037 28 100.0 32 ............................ AATCAATAGCGGATTTTCGGAACTGCGTCCGT 14097 28 100.0 32 ............................ GTAACTATATCCACGGCATTCAGGATTGTTAT 14157 28 100.0 32 ............................ TATACCCAGTGGTTGAAGATACGGCCAAATTT 14217 28 100.0 32 ............................ ATTAAAAAGATTGGTTTTTGCAAAGCCTTCCG 14277 28 100.0 32 ............................ AATCAGGCTGAATAACTGCGGATTCATGCTGA 14337 28 100.0 32 ............................ TGAGCCAATCCAATCTTGAAAGGTGGCACGTG 14397 28 100.0 32 ............................ GAAGCAAAAGAGCAGCTTTGGTACATTGAGCA 14457 28 100.0 32 ............................ TGAGTCTTTTAAATCAGATGCCACTGGGCGTT 14517 28 100.0 32 ............................ AGCGTAATGCAGGTCGGTGCGTTAATTGATTG 14577 28 100.0 32 ............................ ATCAGCTGCGTACGCCTGTCCCATGGAAAACA 14637 28 100.0 32 ............................ CACAACTAAATTAGTATTTGCCAGCGATATAT 14697 28 100.0 32 ............................ TATATAGAATGCCAATGGGCGGTATAAGGATT 14757 28 100.0 32 ............................ AAGAAGCGCAAAACAAGCGAGCCGAGCGGACT 14817 28 100.0 32 ............................ GCGTACGCTATGACGATGACATGATCATCTAT 14877 28 100.0 32 ............................ GCGTACGCTATGACGATGACATGATCATCTAT 14937 28 100.0 32 ............................ ATAGTGCTGTAATTGACTGGCTTCTGCTTTTC 14997 28 100.0 32 ............................ ATGACCAAAGATGACGTTAGCGACGTACTTGT 15057 28 96.4 32 ...........G................ GATGCGCAAATTAACGTCGTTCAGCGCGTGCG 15117 28 96.4 32 ...........G................ ACCAATAAAAGCCGTTTCGGGCGGGTGTGTAC 15177 28 96.4 32 ...........G................ TAAAACAGCAAACCCAACACGCCAAGCTGCGT 15237 28 96.4 32 ...........G................ AACGAAGCAACGAAGCTTTAAAGGTAAAATTT 15297 26 82.1 0 ...........G........--....CC | ========== ====== ====== ====== ============================ ================================= ================== 100 28 99.7 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GATTTAGAGAAGTTAAACATTTCAAAATGGTTAGAGCGTTTAACTGATTACGTTCATATCAAATCTATTAGCGAAATACCTGAAAAGGCAATTAAAGGTTATTCAACGTATAGACGTAAACAGGTTAAAACCAATGCTGAGCGTTTAGCGCGTCATCGAATAAAACGTGGTGATATTGGTTTTGATGAGGCACTAGCCCGATATAGTAATGTGGTAAAGACAACAGATTTACCTTATATCCAACTGAAAAGTTTAACATCTGACAAAAGTTTTAAGCTTTTTATAGAAAAGAAAAATGCAGAAAAATCTGAAACTCAGGTTTTTAGCACCTATGGTTTAAGTTCGGAATCATCAGTACCCGAGTTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATGATGGTGAGTAAAAACTTTGGTCTTTTATAAGATTTTGGTCTTAACTCACTGTTATAACTTTATTTTTTGCTTTAAAATTACT # Right flank : CAGATACGATATTAGGCATATTTAGGTTTTTTGTCGTGTACAGAGTCAAAAAAGATAGAATCTGGATTTTTATTACATTTACTATCCGTATACTTCAACAGCAGCTTTGAATGTTTCACTTAACCTTAAACTTTTTTTAAAATTAAATATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 9704-19158 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIST01000017.1 Acinetobacter towneri strain AeBJ009 NODE_18_length_24167_cov_21.4183_ID_142968, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9704 28 100.0 32 ............................ AAGCTAAGGCGGCTGTGACATATAGCGACAAC 9764 28 100.0 32 ............................ TGATACATCAGCAAAGATTGGATAGACAACGT 9824 28 100.0 32 ............................ GCGTGGTGTTTCAACTGCGACAGGTTATACAC 9884 28 100.0 33 ............................ ATTCTTCGAGTCCATCAATGTGTTGGTCTTTAA 9945 28 100.0 33 ............................ ATAAAGTTTTGAACACACCATCGCGCTTGAAGT 10006 28 100.0 32 ............................ AATATCGGAAGCAACAACCCCAATCAATAAAC 10066 28 100.0 32 ............................ TGAACCAAAAAATGAAGACAACAACCCAAAGA 10126 28 100.0 32 ............................ GTAGTTGGAGCTACTGAGCCTGACGTTCAATA 10186 28 100.0 32 ............................ TCCTCAATCAGTACCGACTTTTTTGGCGTGAC 10246 28 100.0 32 ............................ TCATCCACAATTTTCCGCATCTGTTCGATTGT 10306 28 100.0 32 ............................ TCACCAATGCTGCCCATTTGCGATAAAACTGC 10366 28 100.0 32 ............................ AACACAAGGCGATGTGCAAACTTTTCTAGAAA 10426 28 100.0 32 ............................ GGACAAAGCAGATCACAGCTAACCTCACCAAA 10486 28 100.0 32 ............................ GCCAATTCTTCTGCCTCGCTGCGTCCGTAGTA 10546 28 100.0 32 ............................ ACCACCAAGCATAGCGATTGCATCCATGTAAA 10606 28 100.0 32 ............................ ATCTCTTCATCTTTGGCAGTTTCAACCTCAAA 10666 28 100.0 32 ............................ CGAAGCACAGTCGCCTGTATTTCACGCCATGC 10726 28 100.0 32 ............................ TTGAGAATGACAATATCAGAACAAAAGAGATG 10786 28 100.0 32 ............................ ACACTAAAGCGATTAGTCAAAACAATAAAGTC 10846 28 100.0 32 ............................ TGAATACAATCTACTGGTAGAAGTAGAAGGCG 10906 28 100.0 32 ............................ AGAATTAGAACGTGCAATTAATGAGATTTTAA 10966 28 100.0 32 ............................ TGCATAAAGACTTCATAATTAATCGGGTCGCC 11026 28 100.0 32 ............................ ATAAGCATGACTGAGATTGGTTTCATAGTAGT 11086 28 100.0 32 ............................ TAACGCACCCACATCCACTGCATTACATAATA 11146 28 100.0 32 ............................ CTACGGGCAACATCCCTAACGCACCCACGTCC 11206 28 100.0 32 ............................ TGAAAGGGAACGCCCTAAATAAAAATAGAAAT 11266 28 100.0 33 ............................ AAGTAGTTTACCGACTGCTTGGGCTTTTAATTT 11327 28 100.0 32 ............................ AGTACACGACCATCTATAAAAATAGAAAAAAG 11387 28 100.0 32 ............................ AAATAGAAATTGGTCAATGAAACAAGATCGTT 11447 28 100.0 32 ............................ TAAGTAAATGATTTACTTACATAAATATACAG 11507 28 100.0 32 ............................ TATCTTATTGGATTGGTAATTCACCTAAATTC 11567 28 100.0 32 ............................ TATTGAACATCTAAACACTTTCCAAATATCAA 11627 28 100.0 32 ............................ GCAACAGAAAAGCCACTAATGTCAAAAATGAT 11687 28 100.0 32 ............................ TGAAAAAGATGAATTTGTAGCTACAATTAATG 11747 28 100.0 32 ............................ TTTCAGGTCGGGCTTATTGGCTGCGCTCAAAC 11807 28 100.0 32 ............................ ATAACAAACAATTGATTATCTTTGGTAATCCC 11867 28 100.0 32 ............................ TGATTCTTGAGCACCAAATAACAAGTAAGCCA 11927 28 100.0 32 ............................ TGCACCGCAAGCCGGATCGACACAAGATACAT 11987 28 100.0 32 ............................ TGGTTTTAATCATAATATAGTCAATAAAATCA 12047 28 100.0 32 ............................ TAAAAATACTGGTTTTAGTTTCCGCTAAAACC 12107 28 100.0 32 ............................ TGATTCTTGAGCACCAAATAACAAGTAAGCCA 12167 28 100.0 32 ............................ TTACATATTTTTTTATCACAAATGTTTTGACC 12227 28 100.0 32 ............................ TTTGAGTTTATTCGATGAAAATAACCTACAAT 12287 28 100.0 32 ............................ ACATAGCTAAATCAATTAGCAATTACACCTTT 12347 28 100.0 32 ............................ TTGACCTAAAAGGGCGTGAACAATCAGCTTTA 12407 28 100.0 32 ............................ AATATCTGCTGAATCTGAAACGTCATCTTTAC 12467 28 100.0 32 ............................ AAAAGCAGTCATTACTAAAGCTAAAAATAAAG 12527 28 100.0 32 ............................ ATACAACCCTACGCCACTGATCTGTAAAAACA 12587 28 100.0 32 ............................ ATTGCATTCTTCGTATCTCAGATGCGCGTAAC 12647 28 100.0 32 ............................ GCATTGGCATACATCGGTCGCAAGATTGCACA 12707 28 100.0 32 ............................ TTACAGTCCTGAACGGTTTGCAGGAGCAATTC 12767 28 100.0 32 ............................ TGCGATCTGCACTTGAGCAAAATATTCTCGTT 12827 28 100.0 32 ............................ AATTGTAGCATTGGCTATGGCTTGTGGTGTTT 12887 28 100.0 32 ............................ ATCTCTGTTGTACTTGGATGCACCAAGCCAAT 12947 28 100.0 32 ............................ TTAAGAATGGAAGTTTATGAGCGCGATAATTT 13007 28 100.0 32 ............................ ATAAATACAAATAAACTCATGATATTCTTAAT 13067 28 100.0 32 ............................ AATAAAAACAAGTGCTCTATTTAAAGTAGTAC 13127 28 100.0 32 ............................ TGCAGCATGTTTTTGCGGTACAGTATCAAAAC 13187 28 100.0 32 ............................ TGACGTTCAAAACTTTGGAGGTAAATGAACAA 13247 28 100.0 32 ............................ ACCAAGTGTGGGTAACGCTGTCGCTGAACTAA 13307 28 100.0 32 ............................ ATTTTGCTTGTTTGAGTATTTTATTTAAATCT 13367 28 100.0 32 ............................ TTCCAATCTTGTCACCCGCAATACCACCCAAA 13427 28 100.0 32 ............................ AGGAAACATAGGTCACATCATAGCTGGTCGAA 13487 28 100.0 32 ............................ GAGGAGGGATTAATAAAATGAAAAGACTGTCT 13547 28 100.0 32 ............................ GCACCCGCAAACGTTAATACGCCATCATCAAA 13607 28 100.0 32 ............................ AATAGGCGGCGTGTTTGTCTACGCGGTGGGGT 13667 28 100.0 32 ............................ TTTGTAAGGCGGCAAAAGAATCCGCATTAAAA 13727 28 100.0 32 ............................ GGTGCGATCCATGATCGTAACCTCGGACGTCG 13787 28 100.0 32 ............................ TCATACAAACGCAACGCTTTATATTTTGGGAC 13847 28 100.0 33 ............................ TCGATTGCAACGGCGATCAATAGCGTTTTGGAT 13908 28 100.0 32 ............................ ACGATAATTAGTCAAGTCATAGTTGTACTTAT 13968 28 100.0 32 ............................ GGAAAGTCTAATGTTTCCGCATTTGATTGATT 14028 28 100.0 32 ............................ GCATTACTACCCACACCTGGGCTGGTTCAACG 14088 28 100.0 32 ............................ TGTGTAGTCCATTTCTAAGCGCTCTTTTGCAT 14148 28 100.0 32 ............................ GATAAGTGTTGGAAGCACTAATCGAGGCCTAA 14208 28 100.0 32 ............................ TTTTTTTGAAATCACTAAGGAAATCGACAAGC 14268 28 100.0 32 ............................ AAACAGTAGAGACACTACATGTATTCGGTCAT 14328 28 100.0 32 ............................ ATGTCTCGAAGTTGAGGGAGGGTGAGTTCTTT 14388 28 100.0 32 ............................ ATAATCCACCCATGCACTGCATATAATGCTCA 14448 28 100.0 32 ............................ TACTGGCTTTGCTTTAAACGCAAATGGCGAAA 14508 28 100.0 32 ............................ GTAAATGTCAAACTCCACATTCACATGAGTAA 14568 28 100.0 32 ............................ ATTGTTTAGATACTGCTTTAAGAAAAGCATGT 14628 28 96.4 32 ...G........................ TAAACTTCTAAATAAATATATCAAGCCCTCGA 14688 28 100.0 32 ............................ AGTGGATGCAGCCCATAGTAATCAATCAGGTC 14748 28 100.0 32 ............................ TTGTGTGGTATGTGGTAGATCGCCAGTGGATG 14808 28 100.0 32 ............................ TTGGTAATATTGCCGTGAGTTTTAATCAGGGC 14868 28 100.0 32 ............................ AAAGATATAGAAGCCATAGCTTCATCAATAGC 14928 28 100.0 32 ............................ TTCTAGATAAAACTTGGCATTACGCTTTTGCT 14988 28 100.0 32 ............................ TCAGCGCGGTTTTTTAGATGCCAAGACTGATT 15048 28 100.0 32 ............................ TAATCCAAGCCAGTACCTCAGCGCGGTTTTTT 15108 28 100.0 32 ............................ AACAGTGCGGGCGTCGTCGTCGAAGCTCCTCC 15168 28 100.0 32 ............................ CGATATCGAGAATGCTGCCCTTCTAGATAAAA 15228 28 100.0 32 ............................ TTGAAGAAATTTGACAGGGTTACCAGTGAAAT 15288 28 100.0 32 ............................ TTTCCCTGATTACAGCTCCCCTTTGCCTTAGA 15348 28 100.0 33 ............................ TGCAATGCGCATTACAAGGGCGTGGCGTGTTGC 15409 28 100.0 32 ............................ AAGCGAGTATTAACAGATGATGAAATTAAAGT 15469 28 100.0 32 ............................ TGGTACTGCAAAAAACTTATTATCTAATACTA 15529 28 100.0 32 ............................ ATGAAACCGCTTGTGGACGTTGCGGTTGTGGT 15589 28 100.0 32 ............................ TAAGCCATGAGCAGCGATTGCTTTTACTAAAC 15649 28 100.0 32 ............................ TAAACCTATAAAGCGCGGTGAAACTTATCGCA 15709 28 100.0 32 ............................ TAACACGGCATCAATCATTTAAACCACCCCTT 15769 28 100.0 32 ............................ TGATGAAGCATTCCAAGTGTCAACAGAGGGAA 15829 28 100.0 33 ............................ ATTGGCGTTTTTGTTTACCGCTTGCTCGTTCCC 15890 28 100.0 32 ............................ AGTACATTATTCAGTTCTTTGATGTGAATAGC 15950 28 100.0 32 ............................ CATACTACATAAAGAAGAACGGACTTTACTTG 16010 28 100.0 32 ............................ AGCAGACCCGATTCGCACAACTAAGTTTTGGA 16070 28 100.0 32 ............................ AACGATGGAATATGGATTAGATATTCGTGACG 16130 28 100.0 32 ............................ ACCAAAATAAAACAGTTACAAGCGTTGTCACT 16190 28 100.0 32 ............................ TACAGTCGTCTATTACGATGCGCTTAGCATTA 16250 28 100.0 32 ............................ TAAAAACAACAATCGAAGCAGCTAAAGAAAAG 16310 28 100.0 32 ............................ TAGAAGTAAAATGGGTGCTGTTGGTATGGGGC 16370 28 100.0 32 ............................ ATTTTATACACCTTTTTAAATGTTGGTTAGAT 16430 28 100.0 32 ............................ TGCTGCTGTCGGTGCTGGTGCTTTAATCGCTG 16490 28 100.0 32 ............................ TGTAGTTTTTTTAGTCTTAAATATTCTTGTGA 16550 28 100.0 32 ............................ TATCAATGTTCACAACTCGATCAAAACAACAA 16610 28 100.0 32 ............................ CTAAATCATTTTGAGATGTAAACTTTGCATCA 16670 28 100.0 32 ............................ TGTATCGCTTACAGTCGCCTTAGTAGCGTCAG 16730 28 100.0 32 ............................ TCTCTGATTACAAGCTCCCATCTAAACCAAGA 16790 28 100.0 32 ............................ TGCATTTTCGTCACCCTCTGCATAATCACGGA 16850 28 100.0 32 ............................ GTGAACGTGCATGCCGATCAGAGCGAGTGTCT 16910 28 100.0 32 ............................ AGTTCAACTGGCGTGTACCTTTGAAAGCAAAG 16970 28 100.0 32 ............................ TGATAATAACGACTGGAGACAAACCCCTGATG 17030 28 100.0 32 ............................ TTAACAAAATGAATCTGAACACAATAATCAGG 17090 28 100.0 32 ............................ ACTACACAAGGCTTTCAGGCAATCAAAGAACG 17150 28 100.0 32 ............................ TGTTATATAATTACCTTGTTGATCAATGGCAG 17210 28 100.0 32 ............................ GAAACCATATTTTTTTACAGCAGCCATGAAGT 17270 28 100.0 32 ............................ TCACCTTTACGACCCACACCAACAATAATCAT 17330 28 100.0 32 ............................ ATTCTGTTTGGGCGTATGAAATAAGTTGATTG 17390 28 100.0 32 ............................ TTATTCTTTTAATTGTAGGCATTGCGTTTGTA 17450 28 100.0 32 ............................ TGAGCGATTGAATAAGGGCATCCGCAAACTTG 17510 28 100.0 32 ............................ TTATGCTTAACGTACAAAGCAGCAGCGTTAAA 17570 28 100.0 32 ............................ AGCAATTGATTGGGCGAAGGCTTCTGCTGGGA 17630 28 100.0 32 ............................ ATAATCAATTATTGTTAGATGAAATATACAAA 17690 28 100.0 32 ............................ AGTTAACCAAAACACTAACGAGATAGCACGCC 17750 28 100.0 32 ............................ AATCCACGTGGTTCTGTGATGCGTATGCAATT 17810 28 100.0 32 ............................ TTTAACAAATTTAATCTATCAAATCTAAATTT 17870 28 100.0 32 ............................ AAAACATACCAGTTTTTGTATTTTTAACCATA 17930 28 100.0 32 ............................ CTAACAAATTTACAAAAACACCTAAAACACTA 17990 28 100.0 32 ............................ TAATTGATGCGTTCATCAGTTGGGCTAAGTTG 18050 28 100.0 33 ............................ TGCTGATAACGGTTGGACTTTGCAGTTGAGGAA 18111 28 100.0 32 ............................ ACTGAGGTGAACCGTCATTTTTAATGTGAATA 18171 28 100.0 32 ............................ ATCGTCAATGCCACCACGAGACAGAACTTGGA 18231 28 100.0 32 ............................ ACTTTGAAAATGTTGGGAAATCGTCTACCTTT 18291 28 100.0 32 ............................ TGAACCAATACCTATACAAGTAAAAATTGGTA 18351 28 100.0 32 ............................ AATCACAGACAGTAAAAGCCCATTCGCAAAAA 18411 28 100.0 32 ............................ GACTGCAAACTATTTGATTACTTTTATCAATC 18471 28 100.0 32 ............................ ATCACGGATAAAGGTAGATCATTCAGGCTTAT 18531 28 100.0 32 ............................ AGTTGCTTGTGCGATATTAAAGGTATATTTCA 18591 28 100.0 32 ............................ ATTACGGATTTGTGTTACGCTTGCACCGCTTG 18651 28 100.0 32 ............................ TGATTGCAGTCCTACAGTCATTGGCGGCAACC 18711 28 100.0 32 ............................ TAGTTGTGGCATTACCACCGTTAAAGATTAGG 18771 28 100.0 32 ............................ AATCTGTTAATATTTCGCCATCAAGTACAATA 18831 28 100.0 32 ............................ TATTTTCTTCTGCACAATCAATACAGCACAAT 18891 28 92.9 32 ..........A..C.............. ATAGATCAACTAATCCTGTCAACGGCGTATTA 18951 28 92.9 32 ..........A..C.............. TATATCTCATTTGTTAGAAGCCGCTTTTGATG 19011 28 92.9 32 ..........A..C.............. AAGAAAATTACTTAGTTTCTGACATGAGCAAT 19071 28 92.9 32 ..........A..C.............. ACAAAAAGGACGGAAATTAACTATCTGAAGCA 19131 28 89.3 0 ..........A..C.............G | ========== ====== ====== ====== ============================ ================================= ================== 158 28 99.7 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTAGATATTCGAAAATGGCTGGAACGTTTAGAAGATTATGTGCATATTACATCAATTCGTGAAGTACCTGGCGATATTAAAGGCTATGCCATTTACAAGCGTAAGCAAGTGAAAACCAATGCCCAGCGTTTGGCACGGCATCGTATTAAACGTGGAGATATTGGCTTTGATGAGGCATTAGCAAGATATAGCAATGTAGTTACCACAACGAACTTTCCATATATCGAAATGAAAAGTCTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAACCTGCTGAAAAAACCGAAACTCAGGTTTTTAGTACTTATGGTTTAAGTTCGGTATCATCCGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAATAGTAAGTTAATACTTGGGTCTTTTATAGGATTTTAAGCATAACTTGCTGTTATAGCTTTATTTTTTATGTTAAAATTATA # Right flank : GTATTATTTTCAGTTATACTTATGCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTGCGATTATCCGCTTATTCGTCGGTCATCCCAATAACACGGTGCTACAATCAAGTGGTTCTCATGCAACCGTGACCATAATCGGACACCTAAATCCCGCTGTATATTTTGGACTGTGAAATTGGAAATCAGCAGGGTAGATTTCATATTGTCATAACGACTATATAGAACCTTATGTACCATCTCTAGGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACTAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTTTCAGAGCGTGAAGTATCTGACCAAGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTGTACTGTTATGCAGAATGTTGCGAATAATTGATGCACTCAGATGGGTTTTAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //