Array 1 1707389-1707660 **** Predicted by CRISPRDetect 2.4 *** >NC_021150.1 Azotobacter vinelandii CA6, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1707389 29 100.0 32 ............................. TGAGCCTTTCGTACGAAACTTGGAACACCAAC 1707450 29 100.0 32 ............................. TATGCCGAGGCTCCGCTAAGAATCATCAAGCC 1707511 29 96.6 32 ..........T.................. TCGGTGACGAACCGCCGGGGGATGACGACCAC 1707572 29 96.6 31 ............A................ ATGATCGGGTATCCGGTCGCCGTGCTTGGGA 1707632 29 75.9 0 ..A.......T.A.C..A........G.A | ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.8 32 GCGTTCCCCGCGGGTGCGGGGATGAACCG # Left flank : GCTGCAGGTGGTCGAGGCCGACGCGCTGCGCCGGGCCCTGGCCAGCGGCATCGGACCGGCCAAGGCGTTCGGTTGCGGCCTGCTCAGCGTGGCGCGCTGCTGATGCCGCCGCCGCTCGAGCCGCTGCGGATGAAGGCGCGGATGTCGATGATCCGCTGCCGCGTACCTTGCGGCGACCGTCGGCATCTTGTCGGTCCGGCTGGGAGCGGCGGACGTACGCCTGCATGCCGGCGGCCGGCCGGACGCACCCGCGAAATGATCTGGTAGCACCTGGCCGGAGGCTGCGAGGAGGATGGCAACCTGCTCATGGCCTGGACCAGCCGCCACGAATCCGGCCACGAGTTCCAGACCCAGGGTGCGAACCGGCGCCTGCCGGTCGAATTCGATGGCCTGCACCTGATGGCTTTCCATCCGCCGGAAAAGCCCGATCCTTGGCAGGAAAAACCGGTAGATTTCTGGCATCTGGTTTTTCCCTTTGGGAACAATCGGTTACGCTAAGT # Right flank : AGTAGTGCCTAACTCTTAAGCGTCTTATGGGGGCTTCCCCGCGTCATCCACAGCCTCATGACTGAGGCTTGTACCCGCGGGCTGGTGTTGGAGGCGAAACTGCCGTCGGGCGGGGAGGGTCTGGATCGGTCCGGGAGTGGCATGTGGAAAAGCGCTACGTCGAGTCGGCGAGGGAGCGGGTGGCGGAAAGGGTGAAAGATATGCAGCGTAAAAATAGCATCTTGCGATATTTGAGCGCGGGCAATATTCTCCGTATCGCGAATTGCTATACGGATGTCGCGGTATGCATGTCATCACACAAAAGCGCATCTGGGAAGCCAAGGAAAAGTGGCCTCACTCCGCATCCGCACTGGATGCGTGGTATCGCCTGATGAGCAAGCTGGCACCGAAGGATTTCGCCGAGATGAAACAGGCCTTCCCCAGCGTGGACAAAGTGGCGGACAAGCATGTGTTCGACATCGGCGGCAACAAGCTGCGGCTCATCGCCGTGGTGGACTACC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCGGGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCAGGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3263055-3261020 **** Predicted by CRISPRDetect 2.4 *** >NC_021150.1 Azotobacter vinelandii CA6, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 3263054 31 84.4 34 ..TG-A.A........................ ATATATTTGGAGCTGCTGGGCTGGCATTTCTAAT 3262989 32 100.0 33 ................................ TGGCTAAACGTAACCGCCAGCTCGGCCAGTCTG 3262924 32 100.0 34 ................................ GTGTTGTCGCGCAGGGTCAGGAAGGCAATGCCGG 3262858 32 100.0 36 ................................ GCCGGTACGCGCACGCATCACCGCATGTGCACGCGC 3262790 32 100.0 34 ................................ CTCTCGTTTCGTCGGGATCACCGCCCCAGAGCAG 3262724 32 100.0 35 ................................ TCGCTGTAGCAAGGCCGGCCTGGGGATATGAAATC 3262657 32 100.0 34 ................................ GGCATAGCCCGTACTGGTTGCATCCCAGTCGCGA 3262591 32 100.0 36 ................................ GTCGGCGAACTCCTCCAGGTAGGTGGTCATCTGCTG 3262523 32 100.0 34 ................................ TGGAGATGGGCCTCGACTGGAAGCCGATCAGCCT 3262457 32 100.0 36 ................................ GTCCAGGCCTCAAACGCGGAGAAAGCCGCGTCGGTA 3262389 32 100.0 34 ................................ GTCACGGTGAAGAAGGTCGCCGAGCGTCGCTTGC 3262323 32 100.0 34 ................................ ACCTACGCCTCGGCGAGCGAGAAAACCCGCTACA 3262257 32 100.0 35 ................................ GCCCCGAGCGTGGGCAAGTTCATCAAGTGGTGCCA 3262190 32 100.0 35 ................................ ATGCCGACGATGGCCATGGCGATCAGGCCTCGCGG 3262123 32 100.0 34 ................................ AACACATAGTTGCCGGTGATGGCTTCGTTGCCGA 3262057 32 100.0 36 ................................ CATGCGTGGGCGGCCCAAGCCTACGTCGAAATTCGC 3261989 32 100.0 37 ................................ AGCGATGACGAAATCTCGTGCATGGACTCTCACGCTC 3261920 32 100.0 34 ................................ GCAGATCCAGCAAGGGAAGGCTGGCGTCAAGGCC 3261854 32 100.0 35 ................................ AACCAGTTGTGCGGCAACACCGCTGTGGCTGATAC 3261787 32 100.0 36 ................................ AGTTCCAGCATTCGGAGAGTACGCGCAGTTGTGGCT 3261719 32 100.0 34 ................................ TTTGTCGCCGCCGGAGGATTCAGGGCCATCAGCG 3261653 32 100.0 35 ................................ GGCATGACCGAGCACTACGCTCGCGAGGAAGCCAG 3261586 32 100.0 34 ................................ ACGCCTGACGAGCTGGCCCGCACGCTCGCGAGGC 3261520 32 100.0 35 ................................ TCGCCTGGGCGAGGCTCGTCTGCAGCGCCGCGTCC 3261453 32 100.0 34 ................................ ATGAACACGTCGCCGCCGGCGGCGATATACGCCT 3261387 32 100.0 36 ................................ ACCACCTGACCGGCGCCTGATGCCGGCCCTGCCCAT 3261319 32 100.0 34 ................................ TGCTGGAGCAGTGCCTGGCCGATGGCCCGCCAGT 3261253 32 100.0 36 ................................ GGCCTGATGCGCCAAGCCACTCACAGCCATACCGAT 3261185 32 100.0 34 ................................ ATCTTCCCGCCATCAAAGAATGCCGAGCACGTCA 3261119 32 100.0 36 ................................ CCGCGCAGTACGCCGGCAACACCGGAGTCATTCACG 3261051 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 31 32 99.5 35 GTCACGCCCCATGCGGGCGTGTGGATTGAAAC # Left flank : GACGCACCTGGCCATCGCCCTCGGCTACCGGGCAGCACAGAGCGGCCTCAAGACCCGCTTCATCACGGCGGCCGACCTGATGCTGCAACTGGGCGCGGCCCAGCGGCAGGGCCGGCTGAAGACCTACCTCAACCGCGCCATCCTGGCCCCCCGACTGCTAGTGATCGATGAGATCGGCTACCTGCCGTTCGGTCGCGAGGAGGCCAACCTGTTCTTCCAGGTCGTCGCCAAACGCTACGAGAAGGGTTCGATGATCCTGACCTCGAACCTGCCGTTCAGCCAGTGGGCCGAGGCCTTCAGCGGCGACGCCACGCTGACGGCGGCCATGCTGGATCGGCTGCTGCACCATGCCCATATCCTCACCCTGACCGGAGAAAGCTACCGACTCAAGGACAAACGCAAGGCGGGCGTCATCCGCCAGAACCGTAACCCCGAGTGATCCAGGTGGGTCATTATTACTTCGGCAAATAAGGGCCAAGGTGGGTCAGTTTTCAGTCGGC # Right flank : AGGTAGTAGCGCCGCCGGAACAGGTCAGACCGTGACGGGGTAAACCTGGTAGGTCCAATGAGTGATGGGCGCAGCCCTCAGCTCGCTCAACAGATGAGGACCTCGTCAGCGGATTCCATCAGGGCCAGCAGGCTCGCCGGCCTGCACAACAGGCCGGATATAAGACTGCTCCTACCTGCACGCCAGCATGATTACCCATTGAGCTCCGGGAGGCGTCCATATAAGGGCCTAGCGCCGGTTCAGGCCCCGTGCCAGGCGGTCGCCGCCGTACTGCAGCAGGCAGACCAGGGCGACCAGCACGACGATCACGGTGATCATGGTCTGGCTGTCGAAGCGCTGGTAGCCGTAGCGGTAGGCCAGGTCGCCCAGGCCACCGGCACCGATGGCGCCGGCCATCGCCGAGGCGTTGATCAGGGTCACCAGGGTGATGGTGAAGCCGCCGACCAGCCCCGGGCGGGCCTCCGCCAGCAGCACGTGCCAGACGATGTGCCGGCGTTGGC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCCCATGCGGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : NA // Array 3 3266351-3265048 **** Predicted by CRISPRDetect 2.4 *** >NC_021150.1 Azotobacter vinelandii CA6, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3266350 32 100.0 34 ................................ TTGATCGCGGTCAGCGGGATGCGCCCCAGGGACG 3266284 32 100.0 35 ................................ ACGATATTGAGCGTCGAAGTGCTGGTCACGTTCGT 3266217 32 100.0 34 ................................ AACACCATCCCGGGGCCGGGAACGCTGCGTAAGC 3266151 32 100.0 34 ................................ CTCGGCGTACAGAACGCCCTGCCCTCGCCGGACA 3266085 32 100.0 35 ................................ AGCGACTGGGCGATCCCTGCTCGCGACCAGCAGGA 3266018 32 100.0 35 ................................ ATCTCATTTCGTCTCGCAAGCCGAATCACTGGCGG 3265951 32 100.0 36 ................................ AACAAGGGATACGTTTGGATCAACAATTAAAGCAAC 3265883 32 100.0 35 ................................ TTCACGTCTCTGCGCGTTCCGGCATGATGCGAATT 3265816 32 100.0 34 ................................ CCTGTATGCCGCTGTGCACGCTTCGCACCGGCAG 3265750 32 100.0 34 ................................ TTCCCATGGCTTTCAGGGACCCTATGGGTGGAGC 3265684 32 100.0 35 ................................ AACGAAGCCCCGCAAGAGGCGGAAGCGCCCTCCGA 3265617 32 100.0 36 ................................ GCCGCCATCGAGATCAAGCGCTCTGGGTGGGGCTAT 3265549 32 100.0 34 ................................ ACGATCAGCGCACCGTCATCGACGTACGCAGTCA 3265483 32 100.0 35 ................................ GGGCCATCAGCGATCCACTCCGCTTGAGAACTCCG 3265416 32 100.0 36 ................................ TTTGCTCAGGGACTGAGCCGCATCGGCCAAGCGTAG 3265348 32 100.0 35 ................................ AGGAAGGCCAGGCTAGCTCCGGCATAGGTCTGCAC 3265281 32 100.0 35 ................................ GGCAGCGGGTCTATCCCCTCGCTCTGCCCACCCTG 3265214 32 100.0 35 ................................ ACTGCCCTGTCCAACCGCCGGGCGCGCAAATACAA 3265147 32 100.0 36 ................................ CGCCAGGCGCAACTCGGCCATGCGGGCCACGCTCTG 3265079 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 20 32 100.0 35 GTCACGCCCCATGCGGGCGTGTGGATTGAAAC # Left flank : TACCCACCCTTCATCTGGAAGTGAGCCCCGACCATGATGGTTCTGGTGAGCTATGACGTGAGCACCGAAGGCGACGGTGCCCGCCGCCTGCGTCGCGTCGCCCGCGCTTGCCTCGACTATGGCCAGCGCGTCCAGTATTCGGTGTTCGAGATCGAGGTCGACCCGGCTCAGTGGGTGTTGCTCAAGAGCCGGCTGTGCGAATTGATCGACCCGGAAGTCGACAGCCTGCGCTTCTACTACCTGGGCCGGAACTGGCAGAACCGGGTCGAGCACGTCGGTGCCAAACCTGTACTCGACCTGAATGGCCCGCTGATCCTCTGAACCGCGAACCCCAAGCGACCGGCAAAACTCCGGCAGGTTCGCGCGCTACTTCACAACCCGGATTTCCTGCCTGTCTGCCCTGGCTTCGCCCTCGACTGGACAGAGAAAGGCCGCTGCATCCGCTGGTTCGCATAGAGTCGGCAATTCCACTTTGCAGATCAACAGGTTATACATACGGG # Right flank : ATGCCGCGCACGGACTGGCGGCTGAATTTCGATTGTCACGCCCCTGTTAGCGCCGATGTAAAACTGACCCACCCCAGCGAAGTAAAATTGACCCACCTGGGCTAACGTCGCGGCCTTTTCGAGGCCGCCCATGTTGACCCAGGAGCAAGCAGTGGAGATCAGAGTATTAGCCCGTCAAGGGCACAGCATTCGGCAGATCGCCAAGATGCTGGGCGTGTCCCGCAACACCGTCCGGCGCTACCTCAAGGAGCCCACCGTCCCGCGCTACTCGCCGCGAGACCCCAGGCCCACCAAGCTCGACCCCTTCCATGACTATCTGCGCGAGCGGGTGAAGCAGGCGCATCCGCTCTGGCTGCCGGCCACCGTGCTGCTGCGCGAGATCCGCGAGCAAGGCTACCAGGGCGGCGCTTCCCAGTTGCGCGCCTGGCTGGCCAGACTCAAGCCGAGCAGGCCGGACGATGGCCCGGCGGTGCGCTTCGAGACCGAGCCCGGCCAGCAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCCCATGCGGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : NA //