Array 1 13201-15173 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPPJ01000058.1 Micrococcus aloeverae strain DK2 NODE_58_length_15305_cov_67.7471, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 13201 36 100.0 34 .................................... TCCGTGGCGGGACCATGTATGCGATCTGGCGGAC 13271 36 100.0 37 .................................... GCGGCCCACCACGACGCCCTCTACCGTGGCACCCTGA 13344 36 100.0 35 .................................... CGGGGCCGTTCCGTGCTGGGCATCGACCCCGGGTT 13415 36 100.0 35 .................................... GACACAACCCCGCCCGAGGAGACTGCAACCCGCGC 13486 36 100.0 38 .................................... AACAGCTCATCGGTGGCCACGGCGTGCGCGCGGGCCTG 13560 36 100.0 37 .................................... GGTCACGGCAAGGATTTCGCGCGGGGCATCGCGTCCA 13633 36 100.0 35 .................................... CGGATCGCGTCCCCGAGGTCCCGGATGGACTCGCC 13704 36 100.0 36 .................................... TTGCCGATGACCTGGCTGGACACGTCGAGGCCGTCC 13776 36 100.0 35 .................................... GAGCCCGGAGACGTGACGGTGGCGAGGTCGCGGGT 13847 36 100.0 36 .................................... ATGAAGGCCACGGTGCCGCTCATGGTGTCCAACGCG 13919 36 100.0 35 .................................... GGGCACACCGCCGTGGTCATCGGCAACCCGTCCGG 13990 36 100.0 34 .................................... CAGTCAATCCGCAACCACCAGAAGAAGCACATGC 14060 36 100.0 35 .................................... GCACCGGACGCGGTGGTGACCGAGCTCCGGGCCTG 14131 36 100.0 39 .................................... TGAACATCGGTGAGGCGGGGGGTGGTGTGTCCGGCACGT 14206 36 100.0 35 .................................... GTCACCAGCATCGCCCCGGGTCCCCAGCCGCGCGC 14277 36 100.0 34 .................................... CGTCAGCAGCCGTCCGGTGAGCTGGCGCAGGTCA 14347 36 100.0 34 .................................... CTGGCCGTCGCCAACGACCCGGACGAGGCCCTCC 14417 36 100.0 34 .................................... CAGGGCATCAACCGTGTACTCGCCCCCATGTGGG 14487 36 100.0 35 .................................... GGCGACTGGGAGACGAGCGGCAACCGCAACCCTGA 14558 36 100.0 34 .................................... CCGGCGCAGTGGTGGTCCGTGCAGGACTACCTCG 14628 36 100.0 37 .................................... GTCGACGGGCGCTTCATGTACGCCGCCGTCTGCTCCG 14701 36 100.0 34 .................................... TGCGTGTAGGAGCCGCCCAGGTGGCCGGCCAGAA 14771 36 100.0 38 .................................... ATTCCGCGCCAGCACTGAGATCGGAGGGGGCCCCCATG 14845 36 100.0 40 .................................... GGTGCGCAGTGCGTGGACCCTGCCCTGCATTATGGTGCGA 14921 36 100.0 37 .................................... GTCGACGGGCGCTTCATGTACGCCGCCGTCTGCTCCG 14994 36 100.0 34 .................................... TGCGTGTAGGAGCCGCCCAGGTGGCCGGCCAGAA 15064 36 100.0 38 .................................... ATTCCGCGCCAGCACTGAGATCGGAGGGGGCCCCCATG 15138 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 28 36 100.0 36 GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : GTTGAGTGCCCGGGATCGTCTCCGGAGGAGGCTCATCGCCTATGACATTCCTGACGACCGCCGCAGATCCCGGGCGGCCCGCGTCCTCGAAGGGTTCGGAGATCGAGTCCAATATTCAGTCTTCGTGGTGGATGCCTTGCCCGCCCAGTTCGTCTCCCTGCAAGCAGCCCTCGAAGCGGTGCTGGATCCGGGCGAGGACAGCGTGCTGGTCTGCGACCTCGGCCTGACGGCCACGCTTGGCGCAGAGCAGTTCAGCTTTCTGGGTCGATCACGCGAGATCTCTGTGGATGGGCCCATCATCATCTGAAGCGAGCCAGGGACCTTCGCGAAGGCTCCGTCGATGTCCGGAATCCGGCGAGCCGTCGCATCAGAAAAGGGCTTGTCAGCCCACGGTTCATGGGTCGAGGCCGATAAGCATGGCGCTCCACGGACGCCTCTTGAGCCCAGGGCTCGCCGACGGTCGCGTCTGCCCATGTCAAAGGGCTGTAATCTGAGGTGCT # Right flank : GGTGCGCAGTGCGTGGACCCTGCCCTGCATTATGGTGCGAGTCTCCGCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 144-611 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPPJ01000186.1 Micrococcus aloeverae strain DK2 NODE_186_length_626_cov_61.3527, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 144 36 100.0 37 .................................... CGACCCGGGCACACCCCACCGACGCGGGCCTCGACCT 217 36 100.0 35 .................................... ACGAGGGGGGCGGCGGTCGCGCCGAGACCCTTGAT 288 36 100.0 35 .................................... CTGACGTCCACGATGACGTGGAAGCCGGGCACCCC 359 36 97.2 34 ........................G........... GGGATGGGGCCGGTCATCGCGGCCCGCCGCTTGC 429 36 94.4 35 ............C................G...... CGGGCGGCAGGCGTGGAATGGATCAACCGCAACCA 500 36 100.0 40 .................................... TCGCACCATAATGCAGGGCAGGGTCCACGCACTGCGCACC 576 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 7 36 98.8 36 GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Left flank : TGCCGCCTCACCCCCGTCGAGGACACCGGAAGCGAGGTGGGCACCGACACCGACACTGCCCTCGAGCTCAGCGCCTGACAACCCCAACGAAGGATCCAACCGCTACACCACCACAAGGGGCTTGACCGGGACGGCCCGCCCGGG # Right flank : CATGGGGGCCCCCTC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [31.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 2894-2621 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPPJ01000152.1 Micrococcus aloeverae strain DK2 NODE_152_length_3105_cov_25.5228, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2893 29 100.0 32 ............................. TACGTCAGCCAGATCATGCAGCTCGCCCAAGC 2832 29 96.6 32 .........A................... TTGCACCCCTCCCCCGTTAGAGGGTGGAACAG 2771 29 100.0 31 ............................. ACGAACGTGTTGCGCTCGCCCTCGTGGACCT 2711 29 89.7 32 ..GC......T.................. CAGATGGCGGCCTTGAATCGGATCGAATACCG A [2706] 2649 29 86.2 0 ......T....C.G..............A | ========== ====== ====== ====== ============================= ================================ ================== 5 29 94.5 32 GGAAGCCCCGCGCACGCAGGGATGAGCCC # Left flank : CAACAATCGAAGGCTCCACTCGTCCCTGGCTATGACCACCCCGGCCGAGTACGAGACTGCCTACTACGCCGCCCTCAACCGAGAGCTGGCACCCACATAGGAGCGGCACGAAACCCGGGACGCTTCATCCTGCCGGGCGGGGCCCGCTCGTCTCATCTCAGCCCGGGCCTCGTGCCAAGAACCTCATGACCCACAACACCTAGCCAGGTAG # Right flank : GACTCCCAGGGGCATTCACGGCTCCTGGGTTGAGCTGTCGTAGGGATCTGGGCTGGTCCCCGGTTCTTCCTAGACGCCAGCCAGTGCTCGTGACAGCTGCGGGTGTCGTGGAGGTGCTGCGGGGACGTGTCGCGGTGTCCGCGGGATGCTCAGCTGGTGGGCTCGGGGACGGTGGCCTCGCACTGGACCATGGGCATGCCCTTGGGGTCGCCGGTCTGGGCGTCCAGGGGGGCGGTGGTGCCGTCGGCGATGATCTCGCAGTGCAGGTCGCCGGCGGCGGGCAGCTGCGGGACGTTGGCGATCACCTGGATCTTTTCACCGGGCTTGGCCTGGGTGCGCAGGGTCAGGGGGGTGGTGCCGGCGGGCTCGGCGGGGATGGTCTCTTTGGTGTGGGTGTCCGCGCCGGTGCCGCCCACGAAGAGGTTCACGCCGCCGCGGGCTGCCGTGGTGGTGGTGCCGTCGCGGGGGATCCACTGGATGCGGATCTGCACGTCCACGGG # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAGCCCCGCGCACGCAGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //