Array 1 125604-124250 **** Predicted by CRISPRDetect 2.4 *** >NZ_SQIV01000130.1 Escherichia coli strain LVNMSB167 NODE_1216_length_161820_cov_57.010075, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 125603 29 100.0 39 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCNNNNNNNNN 125535 29 96.6 32 N............................ GGGTTCTATTTCCTCGGGATTTGCCGACACGC 125474 29 100.0 41 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTNNNNNNNNNN 125404 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 125343 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 125282 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 125221 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 125160 29 100.0 38 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGNNNNNNNN 125093 29 93.1 32 NN........................... CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 125032 29 96.6 37 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACNNNNNNNN 124966 29 93.1 32 NN........................... CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 124905 29 96.6 40 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTANNNNNNNNN 124836 29 93.1 32 N.......C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 124775 29 96.6 41 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTATNNNNNNNNN 124705 29 96.6 32 N............................ CCGCACACGTCGAGCTGGTGGGGATTAATGCT 124644 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 124583 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 124522 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 124461 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 124400 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 124339 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 124278 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================= ================== 22 29 98.3 34 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //