Array 1 63545-66513 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMUV010000006.1 Eggerthella lenta strain 1001095IJ_161003_H5 NODE_6_length_227205_cov_26.0198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 63545 33 100.0 34 ................................. ATGCCCGGTGACGCATCTCCCATCATCTCCGGCA 63612 33 100.0 33 ................................. AGGAACGTGAAGCCGCGCGTGAGCTTCGTCATG 63678 33 100.0 33 ................................. GAGACGGTCGCCCGATCGTCCGATGACGGGGAG 63744 33 100.0 33 ................................. ATCACTCGCAGCATCTTGGGAAACCTCCTTTTC 63810 33 100.0 34 ................................. CGTCGCGTGGTGCAGGGCGCGCAAACGCTGTCCA 63877 33 100.0 35 ................................. AGCTCCAATACCATTTTAAATTTTACTTCCAACGG 63945 33 100.0 38 ................................. AACGAACGCTCCGACATTGACGGCATCTCCCGTAGGGA 64016 33 100.0 35 ................................. TCCAGCGCGCTCATGATGGTGGCCCAGTCCATGGC 64084 33 100.0 33 ................................. TTCGCAGCCGCGCCTTTCGTGGCCATGTCTCGC 64150 33 97.0 34 ......T.......................... ACTCCGAGCGACTCGCCCGTGCGGGCGCTGCCGA 64217 33 100.0 34 ................................. TTGGCCGCTCATCGGTACAGACCAATCGCAGGAA 64284 33 100.0 33 ................................. GTTGTCAAGCTCTGCTTCGCCTCCCAGTCAATG 64350 33 100.0 33 ................................. GGCCAGCAGCGCGACGCAGCGCCTCATGGCGAC 64416 33 100.0 33 ................................. CTGTAATGCCTGATCTGTTTGCCGATGTACTCA 64482 33 100.0 33 ................................. GAGAGCGCGGAGCATATGACGCAGTGCGTCTGC 64548 33 100.0 33 ................................. GTCAACGCCGGTGGCACGTGGCCTGCGTCCCTG 64614 33 100.0 32 ................................. ACGCGGCTGCCGTCCTCCATGCGCGCGTCCAT 64679 33 100.0 33 ................................. GAGACCGAAAGCCGCGATTCGTCGAGCATCGTC 64745 33 100.0 35 ................................. GCTTTCGTCTGCTACCTGCTCGTCAGGGATGCGCG 64813 33 100.0 33 ................................. CGCCTGCTTTGCAGGGTCTTGCAGATCGGCGGT 64879 33 100.0 35 ................................. TCCTTGACGTAGAGATAGCGAAACTTGCCGTAACG 64947 33 100.0 33 ................................. AACTTTATCACACTGTCTCGGCTCGATAGCTCC 65013 33 100.0 34 ................................. AAGCGCGGGATGCTCGTTGATCTTGTCTACTACA 65080 33 100.0 34 ................................. CGGCATGGACGGCGATGATCTTGTTGAGGGCGTG 65147 33 100.0 33 ................................. GGATGCGAACCAGAAGAGCTCTACGGTCTCAAG 65213 33 100.0 34 ................................. CATACTGTGAAAGGGGTATAGCCAGGTTCGACGG 65280 33 100.0 34 ................................. CGTCTGGTGATCTCGTCCATTCGATCTGCTCCCT 65347 33 100.0 33 ................................. CGTATCCCAGTACTACCCTGCGGTCGCTGGCGG 65413 33 100.0 33 ................................. TGCCATGCCCTGACCCCTTCAACGGTGGACATC 65479 33 100.0 33 ................................. CGACCTTGCGCGAGACGATGCCCGAACCGTCGG 65545 33 100.0 35 ................................. TCTCCGCTTTCGTCTCGCGGCCATTCCATCCCCGG 65613 33 100.0 34 ................................. CACGCACCCACCATGTGATAGCTGGTCGATCTGT 65680 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 65748 33 100.0 34 ................................. GTCTCTGCTGGAAGCCAATCGGTCTACATCGAAA 65815 33 100.0 35 ................................. GGGCATATCGGCATAGCATGGTACGAGGAAGCCGA 65883 33 100.0 33 ................................. AACAGAATGTCCTCGTCGTGGGCGCTGAAGCCG 65949 33 97.0 33 .....................A........... TGACGAGTATCGCCTATGGCTTGAAAGCGAGGT 66015 33 100.0 33 ................................. AAGCACACCACCAAGCAGACGCGCAGCCTCATA 66081 33 100.0 34 ................................. GTCATCTAGGACGTTGCCGGAAACGACATCCTGC 66148 33 100.0 34 ................................. GTGCCTCACCGGCCGGCACGTACGCTCGCGCACG 66215 33 100.0 34 ................................. CAGAACTTCGCGATGGCGAAGCAGAGCGGCTACG 66282 33 100.0 35 ................................. GTCCCCGTCGGCGGCTTGGTGTCCATGCTGATGAT 66350 33 100.0 33 ................................. TCGTCCTCGCTGAGGAAGTAGGGGTCGAGCGAG 66416 33 100.0 32 ................................. AAACGGTTGAACGATTTGCGGACGCTGGCGAG 66481 33 97.0 0 ................................C | ========== ====== ====== ====== ================================= ====================================== ================== 45 33 99.8 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCTGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGGAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAACAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAACCAACGTACGAAGCTGAAGGGTTCTTGGCGTTGTAGGACCATGGTGCGAGCATGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCA # Right flank : CTGTTCGGGTTGGCTGGCAAGCTGAACGCTGACACGTCATCGTTCAGCTTGCGGGCGCGCGGGTTGAAGTCGCGAGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCTCAAACGAGGGGGTAACCGATCCTTGCCGTCGCTTCCTATCGAGACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGCCTGCGCCGAGTTGTGAAAGGCGCAGGCGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAGCTCAAACGTCGTGCAGTCCACCAGCCCGCGATTCGTCAGCCGCAGCTCGGGCAGGCATGCCAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAGGCATGCACCTTCTCGCTCATCGTCACAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //