Array 1 22980-24837 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAW01000041.1 Stappia sp. P2PMeth1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 22980 29 100.0 32 ............................. TCGGTTGGAGACGACAGCGGCATCACCTTTAC 23041 29 100.0 32 ............................. CTCACAGTTGGTGGGGGCTATGTTTCGCCACA 23102 29 100.0 32 ............................. CCAGCCATGTCGCTGTCGAGCAGAGCACTGTC 23163 29 100.0 32 ............................. ACGTCCCGCAGAGCGAGAGCGATATTGGCGTC 23224 29 100.0 31 ............................. CTCGCGAAGCTCTCTCGCAGAGGTGCCTACA 23284 29 100.0 32 ............................. CACCGGCGTCGTGGGCGGGATCACTTCCGGGT 23345 29 100.0 32 ............................. TCGCTGGGAGCCTGCTGGGCTCGCCTTACGCC 23406 29 100.0 32 ............................. GTGGTTCGTGTCGTCTTTCATCTCTCTTGCTC 23467 29 96.6 32 ............................G CCGCCCGGCTCCGCCTCCACCGCGCCCTGCTC 23528 29 100.0 32 ............................. GAGGAACAGATACGTCTGTTCCGCGCTATCGA 23589 29 100.0 32 ............................. AGGACAAGCACATGTAGGCACTCCGCTATAGG 23650 29 100.0 32 ............................. GTCGGCGAGAAGCCCCGCGTCGGCCACGCCGC 23711 29 100.0 32 ............................. ATGGAAAGCTTCGTGCTGATGTGCGAGGCGCT 23772 29 100.0 32 ............................. TCCACGACCGGGTGATAGTCGTCTTGCAGAGC 23833 29 100.0 32 ............................. AACCTGGTGGACACCAGCCGGCCGGACTGCCA 23894 29 100.0 32 ............................. TTGCCCCTTCCGCTGTCATGTCATCCTCCGTT 23955 29 100.0 32 ............................. ATCAGGCGGCACTCCTCCGCTTGGCGAAGGCA 24016 29 100.0 32 ............................. ATCCACCGCCCGGTGAGGGAGCAATGCAGACA 24077 29 100.0 32 ............................. CTGACCGTCGAGCCGCGCGTGGCGCTCGGGCC 24138 29 100.0 32 ............................. CGCGCACGTCTGCGAAACACTGCCCCCGAGCG 24199 29 100.0 32 ............................. GTCCGCGTTGCGATCTCAGTGCCCGGCGCATC 24260 29 100.0 32 ............................. GTCGAGCCGATTGACCGGCGCCGCTGTGCCGA 24321 29 100.0 32 ............................. CCCGAAGCGGCTGGCGGACCATCTGTCTACGA 24382 29 100.0 32 ............................. ACCTATGGACCGGCGCGGCGCTATCTCGATCA 24443 29 100.0 32 ............................. GCCGGAGGCGAGGTGCGCGAGGAGCGGCGACA 24504 29 100.0 32 ............................. ACCCCGTCCGCGAATTTCCACGGCTCGCCATC 24565 29 100.0 32 ............................. TGCGGTGCCACTAATCGCGCCGGGTTGTCTTG 24626 29 100.0 32 ............................. TACGTCAACCTGCTGCTCCCGATCCTCGAAAA 24687 29 100.0 32 ............................. TGCTCGCCGTCATAGCCGAGCGGCTTCACCGG 24748 29 100.0 32 ............................. TTCGCCACGACGGTCGGCATCATCGGCAACCG 24809 29 89.7 0 ......................C..AT.. | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.6 32 GGTTCCCCCACACGCGTGGGGATAGGCCC # Left flank : AAGGCTATATCCGCGGCGTGCGCGCGATGATCGCCCCGGAGAAGGTCGAGCGCGGCTCCTTGGTGCTGGTCGGCGTGGTGCTGGACCGCTCGACGCCGGAGAGCTTCAGCGAATTCGAGGCGGCGGTGCGCAAGCTCGCCTTCGTCCTCGACTGCCATCTGGTCGCCGGCGATTTCGACTACATGCTGAAGATCCGCGTGCGCGACATGGCCGACTTCAACCGCCTGCACGGCGACAAGCTGATCGCCCTGCCCGGCACCCGCCAGACCCGCACCTTCTTCGTGATGAAGGAGGTGATCGACAACGCCCTGCTGGAGTTTTGACGCGCGCGGGACGTACCGGCACTGGCACGGTGCCACTGGCACGGTACGCGGCCAGCTTGACCCCGGCCGGAGCCCGCCGATAGACTTGCCGCGCGCGGGGCCTGCCCCTCGCTTTTCAAACCGGCCACCCGGTGTTCTTTGACACTGTCGAGGAAAGTCAACCTCTTGGGCCCTAGG # Right flank : CTTGCCCGGTCGGCCGGTGGGCAATCAGGACAGGTCTGCTGTCTTGACGCAAGGGAGAAGACACTTCTACCCTGTCTTCAAAGTTGCACTGATATTTTTTCCATTAGGCGTTTCATGCCAGTAACCGACACTGACCTTGGCGAGCCCTGGGGCAAACTGCAAGACGGGGCTCGCCACCATCTCTTGCACCATTGCGCTGACGTTGCGGCCTGTTTCGAACTGCTGGTCCGCCTGCCGGTGGTGCGGGCGCGGCTGGAGCGCGCCGCGGCGCGAAAACTGACCGAGACCGATCTCAGCCGGCTTGCCGTGCTGGCCTTCCTGCATGACTGCGGCAAGCTGCATCCCGGCTTCCAGGCCAAGGGCTGGCCGCAAGGGATCTGGCATGCTGCCCTGCGCGGTCACTTGCGCGAAGGCGCGTCGATCTTCATGGCAAGGGACCGGCCGTTCCAGGGCCGCATGGCGGAGCACCTTTGCCTGGGCGAGTTGCTGGACTGGGGCGT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCACACGCGTGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 33607-34855 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAW01000041.1 Stappia sp. P2PMeth1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33607 29 100.0 32 ............................. CACGGCCAGTCCGATAAAGAAGCTATTGCCTT 33668 29 100.0 32 ............................. TTTACGATCCTGCACAGGTCGGCCCTGTGTCT 33729 29 96.6 32 ............................T TCACTCCCGTCTCCGGCTCATCAGTCGACGCC 33790 29 96.6 32 ............................T TGCAGAAGAACGTCCCGTTGCCGTCCCTGTTG 33851 29 100.0 32 ............................. CCGATGCCGGACAGCAGCGGCAAGGCGCGGCC 33912 29 100.0 32 ............................. CTCAGGATCGACCTGAGGATAGGCATAAGGAA 33973 29 100.0 32 ............................. GGAAGCGCCCAGCGCCACCGAACGATAGCGCG 34034 29 100.0 32 ............................. CGACGACAATCGAGCCGTCGGCCGCGCGCATA 34095 29 100.0 32 ............................. GGCAGATCGCGACGATATACACGAGACGTATC 34156 29 100.0 32 ............................. GATAATGTTCCTCGTTCGACGCCTCTCAACCC 34217 29 100.0 32 ............................. ATGCAGTCCCGTGCGATCACGGACAGCATCCG 34278 29 100.0 32 ............................. CACGAATGCCCGCGGCTGCTGGCGATCATTGC 34339 29 100.0 32 ............................. GTACAGCTTGCGAGCAAAGCCGGTGGTCGGAA 34400 29 100.0 32 ............................. CAGATGCCAAGGCCGGCCAAGCCGGCGATGAC 34461 29 100.0 32 ............................. ATGCCGGCGAAGCGCTCGGCCGTAAGGTACAG 34522 29 100.0 32 ............................. TTCGGCTATTCCATGGTTAAAGACACCAACTT 34583 29 100.0 32 ............................. GAAAAGGGCGAGCGCCTGTGTGGATGGCGCCC 34644 29 100.0 32 ............................. ACCCTCGACCGAGGCGCCTGGAGCAACTGAGG 34705 29 100.0 32 ............................. ATGCTCGTCGCCCTTGTCGCTAGGCGCCGCGT 34766 29 100.0 32 ............................. CACGGGATCAAGCTGTCCCCGGCGCAGGTGCT 34827 29 89.7 0 ..........................TGG | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.2 32 GGTTCCCCCACACGCGTGGGGATAGGCCC # Left flank : GTCGAGCGGCTGACCCGGCGGCGTGCGGCGCTGCTGTTTCGCCAGCGCTCGGTCATTCCCTCGATGATCGACCGTATCAAGTCGCTGATCGGCCCCGGCGAGGAGACCGACACGGAGGCGCCCGCCTGATGCCGATGGTGGTTGTGATCACCCGCGATGTCGAGGGGCGCTACCGGGGGTTTCTCGGTTCGGCGATGCTGGAACTGTCGGCCGGTGTCTATGCCCATCCGCGCATGAGCGCGGGGGTGCGCACGCGGATCTGGGATGTGCTGCGCGACTGGCACGGCCAGTTGCGGCGTGGCAGCATCGTCATGACATGGGTGGACAGCTCCGCCAATGGCGGCCTCGGCCTGCTGGCGCTCGGCGAACCGCCGAAGGATATCGTGCCGCACGACGCCATGCTGCTGGTGCGCCGGCCCTTGCCGGAAATGAAGGGTTTTGACTGAACCCTCCATTGTTCTTTGACATTGTCGATAGGAATCAGCATCTTGGGCCCTAGG # Right flank : ACTTGCTTCGCAAAAGTGGAGAGGGTTTCCTGGCCTTGGAGGGCTTTTGATGAAGCAGCAACGATTTACGCAGGAGTTCCGGGACGAAGCGGTTCGGCTGGTTGTTTCGGTTGGTCGTCGCCAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCACACGCGTGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 601-1424 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAW01000043.1 Stappia sp. P2PMeth1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 601 29 100.0 32 ............................. CGCACCTCGGCGGGCGCCGCCGCCACCATCAC 662 29 100.0 32 ............................. CACACAATCGGCGGTCTTCCTCTTGCTACTAT 723 29 100.0 32 ............................. TGCCCGAGGACCTGCGGATCGTCTCGGATGGT 784 29 100.0 40 ............................. CTGCTGGTGCGCTGGGGCAGCCAGATCGCCACGGCGATCA 853 29 100.0 32 ............................. AACCAGGGAACTGGCAACACCATTCGCAGCAA 914 29 100.0 32 ............................. GACAACCACCCCGACGGTGCGCCCGACGCGCA 975 29 100.0 32 ............................. CCGGCATCTCGAATAGCGATCGAGGACTATTC 1036 29 100.0 32 ............................. CGATCCATTTGCCTGGGCGTCTCCACCCGAAC 1097 29 100.0 32 ............................. CTTCGTCCAGACCCGGGCGAGTTCCGTTTCGC 1158 29 100.0 32 ............................. GCTCGTCCGCGCGCGTGTGAACGACGCGATCC 1219 29 100.0 32 ............................. GCCTGATGTCCGGCCCGGCGCCGGCGGGTTCC 1280 29 100.0 32 ............................. GTGGCTCGCCACAGTCCGTTCAGTCTTGGTCC 1341 29 100.0 26 ............................. ACCGGAGACGGCGGTGGCGGGAAGGC 1396 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ======================================== ================== 14 29 99.8 32 GGTTCCCCCACACGCGTGGGGATAGGCCC # Left flank : CCATCTGTGGACCGGTCAGGGCTGGCTCTATCTGGCCGTCATCCTCGACCTGTACGCCCGGCGGATCGTCGCGTGGGAGGCTTCCGACCGGCTGCATGCGGGCGTGGCCCTGTCGGCCCTCGACAAGGCCATCGCCTTGCGCGGGGTGGCGCCCGGCCTCATCCACCACTCCGACCGGGGCAGCCAGTATCGCGCAACCGCCTATCAGGCCAGGCTGCACGCCAACGGCATCGCCCCCTCCATGTCGGCCAAGGGCAACGCTTACGACAACGCCATGGTGGAAACCTTCTTCAAGACCTTGAAAACGGAACTCGTCTGGCGCACCCGGTTCGAAACCCGAAAAGACGCCGTCAACGCCATCGCGCGCTACATCGACGGTTTCTACAATCCCTCAAGACGCCACTCGGCGCTTGGATACATCAGCCCCGTCCAGTTCGAAAAAATGGGCGGATAACAAAACCCCTCTCCACTTTTGCGAAGCAAGTCCAGCTCGCTCGCTT # Right flank : ATGGTCATCGGGGTCGTGTGCCGAGAGTTCGGAAGGCATTTCGAACTCGGAGCCAGAACCACGACCGCGCGACCGGCCGGTCAGCCCCCCGGCTCCGCGCTTGCGCGCGGTCGAGGTCACGGCAAAAGGGATACGAGGCCTACCCTTTGCATTGGCCGTCATCCCGGCCGCGGGCGCAGCCGGAGAGCCGGCGGGGCCAACGCCGGCTCACGGTCTCACAACGACCAGGGGCCCAACGGCCTGCGTCCCGCCAGCATCATGACACAGCCCGAACATACAGGGACCCATTGGCACCCCCGGCAGGTGTTGCCCGCTCTGCCCTCTCCTTGCGTCTTCCCGGACGAGGCCGAAGGCCGACGATCCGGGACCGGGGAGGCACGGCGGTTGCGGTGTCTCGCGCGCGCCGTATGCTCTCGGCTCGCCGGTGCCGGGGCTCGCCGGTGCCGGAGCTTGCCGGTACCGGGGCTCGCGATGCCTCCCGGAAGGACGCAGGGCAAGCG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCACACGCGTGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //