Array 1 841798-842500 **** Predicted by CRISPRDetect 2.4 *** >NC_019701.1 Pseudanabaena sp. PCC 7367, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 841798 37 100.0 39 ..................................... AGTATCGGCCACCAGGCATACCTGATAACAGGTGCTCCG 841874 37 100.0 40 ..................................... CGATCCCATTTTCTGGGACCGTGCCCAGTGGTGCGCCGTA 841951 37 100.0 37 ..................................... TGGCAGTGACCCAGCCATCCGTGTCGGTGCTGTCGAT 842025 37 100.0 37 ..................................... ACACCATTTGACCCAGCCTCAAAACTAGGACGATGGG 842099 37 100.0 35 ..................................... TTTAGTATAGGTCACGTTTACCGGACATGTCAAGC 842171 37 100.0 36 ..................................... TTTGGTTTTAGTGGTCATTTTTTGTTTAGGCTCTTG 842244 37 100.0 37 ..................................... CAGCACAGTCTTTGGTGGGATGCTGTTTTCATTGGCG 842318 37 100.0 35 ..................................... TATTTAAATCAGTATATTTATCTAAGTAAATCAAC 842390 37 100.0 37 ..................................... CTAACAAATTCCGCCATGTGCTTTTTGTCTATACCAA 842464 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 10 37 100.0 38 ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAAC # Left flank : AAGCGTGGTAGCAAAGATGTGATCAAAGCGATGGAGGCGGCGATCGAAACCCACAATCTGGGCGATCGGGTCACGATTGAAACCACTGGCTGCATGGATCGTTGCAAGAAGGGGCCGAATATTAAAGCTTTGCCGGAGGGGGAATGGTATAGCCGGGTTAATCCTGATCAGGCTGAGGATATTCTGCGGGAGTTGCAGGCGATCGATCGATCTTGATTGATCGGTGGGATGCGTTGAATATTCGCCTTCATATAATTTAAAGTTTTTCCCTGGACAAGCTGGGGGTTTGTGAGTATTTTGGTTATAGGTGCTGCGATCTTGCGCGAACCTGTAGTGAACCACGAAAACCGCATAGTTTCGCGTAAGGGCTCGATCGTCTTTTCAGTGGGCGATTGAGAGTTTTGGACTTTTCTGGTGTTGGGCTTTTGTACTAACATTTAAGCAAGTCCGCGCAGGTTGGGGCTAGAAGTCAGTCTAGGTCTTGGTTTCAGATACCTGCT # Right flank : CAAAATAGCTATACTTAACACAGCGCCCCAACCATCAGGAGAGCCAAGATGTTAAGCAAAAATTCAAAATACTTGATCCTGCCCATAGCGGCATTAATCAGCCTGCATCACCCAATCCAAGCCCAATCCACAACCACTAGCACCACCGTCAAAAAAGCCCATTGCCTCTACTTCGAGGCGAAAGACGACGGCCCCGAATCAGAATTACCGCTCGAAGATCCAGGCTGCACGATCGAAATAGGCAACCACAGCGATCGGGTGATCCATTGGTCAGACGGAACCACCACCAAAATCCAGATCGATCCCGACAACCCCACCGTGAACGGTCGATCGGCCAACATCTTTGAAACCAACGAAGCCGAAAGAATATGCATGAATTGGGCAGGTCAGGTTAATCAAGAGGCGATTTGCTATAGTTTCCTGTGATTGTCTGTCTTATTATTCAAGCTTGATCACTAAAAAATGACCGAAATAGGACTAATTCACGGTGGCTTCGTGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 2206597-2212373 **** Predicted by CRISPRDetect 2.4 *** >NC_019701.1 Pseudanabaena sp. PCC 7367, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 2206597 37 100.0 35 ..................................... CCACATATTTGATGGCGGATTGTGATCTTCACGCG 2206669 37 100.0 36 ..................................... ACCGAGGACGACATTTTGGAGTTGTGCCGAAGTGAG 2206742 37 100.0 37 ..................................... TGGCGATCGAGCGGTAGATAGTCTGGGCACAGCCACG 2206816 37 100.0 39 ..................................... AATCACCCAGAGGAGGCGATCGCCAGCTTCGGGCGCGAG 2206892 37 100.0 38 ..................................... CTCCGGTGGGCAATCGGTTGTTACTTGTGGCTCAATTG 2206967 37 100.0 31 ..................................... GAATCTGTTGTCTGGTGATTCATCGTCACCG 2207035 37 100.0 37 ..................................... TAACCTTGCCATACGAGGATTAATCAAAGCTATGTGA 2207109 37 100.0 36 ..................................... ATCGAGCGAGCCAAACAATTTGCGCTGAACTTCCAA 2207182 37 100.0 35 ..................................... AATTCCCGTCCCTGGTATTTATCGAAATATTGGCT 2207254 37 100.0 35 ..................................... TAGTCATCATCGGCTTAAGCAATGCAGCGATCGCC 2207326 37 100.0 35 ..................................... GTTGGCGATCGCACCTGGTAAAACCTGATCTGGCG 2207398 37 100.0 34 ..................................... AATCACCCAGAGGAGGCGATCGCCAGCTTCGGGC 2207469 37 100.0 34 ..................................... ACCTGAGCAGCAATTATCTTTGGTTGGCGATACC 2207540 37 100.0 33 ..................................... TCTGTACAGTTCGTGGGCGATGTTACCTATGTT 2207610 37 100.0 37 ..................................... AATAAACTGCCTGACGGTGTGAAGAAAAATGTAGGTG 2207684 37 100.0 44 ..................................... ATGGGCTGCCACTGTTAAGACTACGTGGGCTGAGTACAACTCAA 2207765 37 100.0 33 ..................................... GATAATAGAGAAATCCAAAAATTACCTATTGGC 2207835 37 100.0 33 ..................................... TCGGTCAGGTCATCGAACTTGATTTTGGTCAGC 2207905 37 100.0 33 ..................................... ACAGTAATGAGAGCCTTTGACAGGGCGATTGCC 2207975 37 100.0 35 ..................................... TAAATATCCAGCGGCTAAAGGCAATGCCGCCAATA 2208047 37 100.0 33 ..................................... AGTTTGACGAGAATTACCCGCAGTGCTTGTTAG 2208117 37 100.0 37 ..................................... AACTTTCATACCCTTCACCTCATTTACTACACGCCGT 2208191 37 100.0 36 ..................................... ACCTACGCATCAACGCCACCACTGGCAACAGCAACG 2208264 37 100.0 36 ..................................... ATCTATGCCCCATCTAGCTTGCGATTGCTACATCTG 2208337 37 100.0 36 ..................................... TTTTCGTTTGCCACTTTAGTTAGTTTTGGCGATCGG 2208410 37 100.0 35 ..................................... CAATCGCCCAATATATACTGTGGCCAGAAGCCAAG 2208482 37 100.0 34 ..................................... ATTGTCACCATGTCGGCGCAGGCATCGCCAACAT 2208553 37 100.0 37 ..................................... GGTGTAATCACCACTGACGAAATTATTGTTAGTTAAA 2208627 37 100.0 42 ..................................... AGGTTCAGTTTGGTTCTGCCGGGATTGGGAAGCCGATCGCAG 2208706 37 100.0 35 ..................................... CTATGCAACTCTTCTGATGCTTCATATCTAGCGAT 2208778 37 100.0 36 ..................................... AAGGAATTTTGCTCAAGCTCACCCCGAATCAACATT 2208851 37 100.0 36 ..................................... TTCTATAACGAATTGAGGCGGTGGGAGCCTCTCAAT 2208924 37 100.0 35 ..................................... ATGTGCTGCCCTACTTGCAGTCTGAGGCAACGGCG 2208996 37 100.0 35 ..................................... TGGACTCAGGCCAACTCATGTTTATTGTGTATATG 2209068 37 100.0 35 ..................................... CTTTAACTCGCATTAGGGCGATCTCTTGCGAATCG 2209140 37 100.0 35 ..................................... ATTCAAACTGGCCTCTGATCTGTGTAGGTTGGCAG 2209212 37 100.0 37 ..................................... GCTGATTAGCCATTTGCGACCAGCGGTTTTGTGTCAG 2209286 37 100.0 35 ..................................... AGGGAAATAACGACATGGCAGTTATTGATATTGAG 2209358 37 100.0 34 ..................................... TGGTATGACTGGCGGCATCCCACTATGCGCCGAT 2209429 37 100.0 35 ..................................... ACTCCATAAACTTTATAGACATATTTCAAAGCAAG 2209501 37 100.0 36 ..................................... ACTGCAACGCGACGCTAATGGAAACAAGCAGCTAGC 2209574 37 100.0 35 ..................................... GATCTCTGGAACAAGAAGGTTCTTGTATGTTGAAG 2209646 37 100.0 35 ..................................... GATCGCCAGATCTTGAGAACCAGCCGAAGTCGCGG 2209718 37 100.0 36 ..................................... GTTTAGGATCTGTTGGGCAAACTGCTGTCTTGTCTG 2209791 37 100.0 36 ..................................... CCAGAGGTGCGCAATTATGCCTAGTTGTTATTTGTG 2209864 37 100.0 36 ..................................... TTGTCCCCGAATAAGCTTTAAAATCTAGCGTCTCTA 2209937 37 100.0 35 ..................................... ATTTCGGTCACTGTTTCGAGGACTTGCTGTCGAAT 2210009 37 100.0 35 ..................................... CCTTAGTGATCCAAATACTTGCCACTTTCTGGTGG 2210081 37 100.0 35 ..................................... AGCCATCCTAAGTCTTGCAAGTGCCTGGGTTTAAG 2210153 37 100.0 37 ..................................... ACTCGCCAGCCGCTTTGCTAATATTATCACCGCCTCA 2210227 37 100.0 34 ..................................... ATCTCCTCCTCCTGGGCTTGATCAGCCTGCGCAG 2210298 37 100.0 35 ..................................... GCGCTGTGTTTAACGCAAATGTGTTGCGCGATCCA 2210370 37 100.0 34 ..................................... ATCTTTATTGTTGCTGTATGGTGGGTTGCCATAT 2210441 37 100.0 38 ..................................... ATGATGAATGCTTTTTCGTGCGCATCTCGCGTTACATT 2210516 37 100.0 34 ..................................... TGATTGGAGTAGGGCTGTTCTTACGGCCTCGAAT 2210587 37 100.0 36 ..................................... TATTTGATGGTATGCAGGTTTGTCGTTTTTGAATAA 2210660 37 100.0 35 ..................................... AAAAGAACCAAGGCAGGCCGCCTGTGACCTGCACC 2210732 37 100.0 39 ..................................... AAGAGATCGGCTTTAGCGAACAAGTCGAGGTGATCGAAA 2210808 37 100.0 35 ..................................... AGGGCGATATGTTTGCCAGGATCGTGCAAGACGCT 2210880 37 100.0 37 ..................................... AACCAGGGCATTGCAATCTCAACTATTAGATATTGAC 2210954 37 100.0 34 ..................................... AACTGGGTAGCCGTCAAATGTTTCATAGGTCAAC 2211025 37 100.0 35 ..................................... GACGATATTATTCATTTGTTGACCTCGACCTCTAT 2211097 37 100.0 36 ..................................... TCGATCTCTTAGTGCTAGCCCCGTCTCACCTTCTAG 2211170 37 100.0 35 ..................................... CCATGTGTTCTTTACCAATGCCAAGACCATCGCAG 2211242 37 100.0 36 ..................................... AGGCACTCCCAGATTCAACCAACCCGCTGCAACATT 2211315 37 100.0 37 ..................................... AACTTTCATACCCTTCACCTCATTTACTACACGCCGT 2211389 37 100.0 35 ..................................... CCAGTAGGGGCGCTCAGTCAATTCAATAAAACCGA 2211461 37 100.0 35 ..................................... GGGCAGGGATAGCTGTTATAATCAGAGCGTCAACA 2211533 37 100.0 34 ..................................... AGCCACACAGCCCAGGGTTAGCTCCACTGCGGTC 2211604 37 100.0 36 ..................................... GATCCCACTTCTTTACGCTAACTGGGATCTATTGTT 2211677 37 100.0 34 ..................................... CAGGGATATTAACTACAACATCCACCCGCACCGC 2211748 37 100.0 38 ..................................... AAAGATAAACCTGGCGAGCGTTTTTTTGTGTCTTGGTA 2211823 37 100.0 37 ..................................... AAGTTTGTCATTTTATTGCTGGCACAATTGTCAAAAG 2211897 37 100.0 34 ..................................... ATCGTTGCCTCTAGCTCAGTTAGTTTGCTCATCG 2211968 37 100.0 36 ..................................... TGTCTTAACAACCTGGTGAAACACAAAGTTGTTGGT 2212041 37 100.0 36 ..................................... TTTAACTCTTTTAATTTGTTCTCTCTCCTCTGTGGG 2212114 37 100.0 38 ..................................... AGCCCTTTCCCTGCCAACAAATTATCTCTGTTGTCAAT 2212189 37 100.0 40 ..................................... TTCTTTTGATTCGATCTGCAAGCCGCGTAAGCCTCGATAG 2212266 37 100.0 34 ..................................... AGACCCAGCGATCGCATCCGCGCGATTGTCCCAA 2212337 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================ ================== 80 37 100.0 36 GTTGCACCTGGCCTTCGGGCTGGGTGAGGATTGGAAC # Left flank : TTTTTAGCTTAGCCCTATATTCCAATCGAAAATCATGGCGAATATTTTGGTTACCTATGATGTTAATACTGAAACCAAGGAAGGCCGCCGCCGTCTGCGTAAGGTTGCCACTACCTGTAAAGATTATGGACAAAGGGTTCAACTCTCTGTTTTTGAATGTAATGTAAATGAAGCGCAGTATGAGGCTTTACGGGCAAAGCTCTATAACATTATCGATCCCGATCTCGACAGTATCCGCATCTACAAACTACCTGCTCCCAGGGAACTTTCGGTTGAGTGCTATGGAATCGACAAATATATTGATTTTAATGACCCGCTGATTATTTAAGTTTGCGCGAACCTATAGCAAGGGCTAAATCCCTGGGGGGTTCGCGTTCTAATCCCTGTCAGCGTTTCGGCGTTTTTTGCTAAATTATGGCTTTTAATTTTAACCATGCTAAACCAGATCCGCGTAATTAACTCCTATGATCACCTCTGCCAAAGGATCTGGTATGATTGCG # Right flank : CATTGCGATTTTTAGATGCTCAATACAGCGCATTTCAGATTAGAGACGCACAGAGATCGGCCTCAAGGAACCAGCCCATAATATCGTCTAGAGAAACCTTGGCAAGAGCGTTAGAAATAGCTTTATGCAAGTCATCATAGTCCCTGGCCGCCCAAGAGCGTAGAAACTGTTTCACCTTTGACCACAGCATCTCAATCGGATTTAGCTCTGGTGAATAAGGCGGTAAGTAAACCAAGTGAGCACCGACGGACTCAATTAACTCTCGCACAGGATCAACCTTATGTACACTGAGGTTATCCATAATCACAATTGCACCAGACCATAGGTTAGGCAGCAATTTATCTTTGAGATAGGACACGAAAGTATCAGTATTATTGCTACCAGTAAAAGTAAAATTAGTCAGCACACCGCGTAATGCCATAGCCCCAATTATAGTAACGTTTTTGCCTCGAGCAAGTGGTTTACTAGCATAGGCTCTCTCACCTAGAGTAGCCCTTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCTGGCCTTCGGGCTGGGTGAGGATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 3 2213433-2214421 **** Predicted by CRISPRDetect 2.4 *** >NC_019701.1 Pseudanabaena sp. PCC 7367, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2213433 37 100.0 35 ..................................... TTTATGGCTTCCAGATCGATTGCGATAGGTCTAAG 2213505 37 100.0 38 ..................................... AGAAATCCTAATGTGGTGCTTAATTCCGAAGTTTTGAC 2213580 37 100.0 35 ..................................... TTTATGGCTTCCAGATCGATTGCGATAGGTCTAAG 2213652 37 100.0 35 ..................................... CAGCCAATCAGACTTTCTTCGAGAGCTTGTACCCA 2213724 37 100.0 36 ..................................... AAGTATTGAGGGTGGGATCACGTTAACATTTCGCAT 2213797 37 100.0 36 ..................................... AAGTATTGAGGGTGGGATCACGTTAACATTTCGCAT 2213870 37 100.0 36 ..................................... AGTCTGGGAAACGTCAAAAGTGGCTACACCTCTAAA 2213943 37 100.0 37 ..................................... CTTTCGAATCGGTTTCTTTCGCTATCAAACGAATAGG 2214017 37 100.0 37 ..................................... TAATTTACCACTGGCTATCCACTGGTTACCCATCAGA 2214091 37 100.0 37 ..................................... ATCATCAGATACATCGTGGCTACACTTAGGCGATCGC 2214165 37 100.0 34 ..................................... GGTCTATGTCCATGCAATAGATGGTTTGCTAGAC 2214236 37 100.0 38 ..................................... ACCGATTAAAACCGGAAGTGGCCGATTTGATCCGTACT 2214311 37 100.0 37 ..................................... AGGATCAAATCTCAATACTATCCAGCCTATTTAAGAT 2214385 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 100.0 36 GTTGCACCTGGCCTTCGGGCTGGGTGAGGATTGGAAC # Left flank : GCCTGTGGCCAAAGCCAGCGTTGATAATCTGCTCTCAGCTGTTGCACTCGTTCTGTATCCCTTTCATCGGCGTGAAAAGTTTTTTTTTCGAGTTAACTCCTGCCTTTGCAACGTACGGCACATGGTTGGTTCTGATACCCTGATGCCAGTACGTTCATACATTTGCTCACATAACTCCGACAGTGTGGCATCATTTTTAGCGGCTACTAACTTTGCTAACTCAGCCAGAGCAGCTTCATTAAACTTGGCTTTTGCTCCTGCCTTGTATGGAATTGGCTCAACTGAACCAGTAGTGCGATAAAGTTGGAGCAGCTGATGGACACTGTCTTTACTAACGCTGAATCGGGTTGCCAACTCACGGATTGAACCTTCTTTATTTTCGTACGCTGTGACTATGCGCTGACGCAAATCTAGAGAATGGGCTCTCATACTTTTTGATTCTTACTTTACTCCTATCATGTCATATTCTATTGCGGAATCTGCTGTATCAAGCCCAAGAA # Right flank : CAATCCAGGCGGCATGTGTTTCATCAGTGATAATGGGACATTAGAAGACACATTACTTAGCCTAACCTGTGGTAGTTTGCAGCGATCGATGCCATTGTTTCGGCTTAAACAACAATATTTTTGGCATAATCTCATGATTGGCTTTGCCCAGATCTAAAAATCTCAATCTTCATAATCCAGATCCAGATCTACTAAAACAGGCGCTATCATATCCACCATTGAATGAGGCAAAGGTAGGTTATGGATCAGCAAGTTTCCAGGCGATCGCTAGGTAAAGGATTTCTAGGTGGCTTAGGCGTAGGACTATCAACAATCTGGGCATGTCGATCGGCAGGCTTATCAGGCAATCAAGCGATCGCGGCCACAACTGATAAATCCGCAAAAGATAATCAAAAATCTAGTCCCTCTAAAGTCAGTAAATCAATTATCAAGCCACCCATGCTCAGTCCTGGCGATCGGGTGGGGATGGTGGCTCCGGCCAGTGATGCCTATGAACCAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCTGGCCTTCGGGCTGGGTGAGGATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 4 3091348-3090389 **** Predicted by CRISPRDetect 2.4 *** >NC_019701.1 Pseudanabaena sp. PCC 7367, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================================= ================== 3091347 35 97.1 45 ...........T....................... ACCGTCTCTGTTGGAATGTTTTACATGATATTGGTCATCGTCAGA 3091267 35 97.1 39 ...........T....................... ACGACCAGTCAGTTCGATCCAGAAAGCATCTTGATAGCT 3091193 35 97.1 40 ...........T....................... TTTTCGGCCTGTATCTCAGATTTGGACAGACCAAGACTGG 3091118 35 97.1 44 ...........T....................... TTGTCTGATCAACTGCGCTAGAAGCAGATGGGCCAATTCGGTCT 3091039 35 97.1 46 ...........T....................... ACATGGTCGAGCCACGTGTTGCGCAGCTTGTTCCATTCGCTTTGAA 3090958 35 97.1 40 ...........T....................... CGAAAAACAAGATCGGTGAGTAAAATTTTAAAGCAAAAGA 3090883 35 100.0 49 ................................... TTGCCTGCTGGAGTTGCAAGCTCAATAGCAAAATTAGCTGCCATGTGGA 3090799 35 100.0 37 ................................... TGGCCTGAAGCTAACCAACTCCACCTGAGGGGTGGGG 3090727 35 100.0 39 ................................... TATATGCATCAATGTCTGTTAATGATGATATTGCTTCAA 3090653 35 100.0 46 ................................... CACCGTCGTTCTGGTCACCAACAACACACCAGCCCTGTTCAGCAAG 3090572 35 100.0 40 ................................... CTTGTTAACCGCTTTGACGGCCATAGGGTGTTCGTCGGGT 3090497 35 100.0 39 ................................... TGGGGAACATCTGTTGCAATGTACGAGGGCTGAAACGAG 3090423 35 88.6 0 .............................AACC.. | ========== ====== ====== ====== =================================== ================================================= ================== 13 35 97.8 42 CTTTCAAACCCATTACCCCGCAAGGGGACTGAAAC # Left flank : GCTTGGTAGAAAAGCTAAGGGGCTTGGCGAGTTGTTCTGAGGCGGTGGATTGTGAAGTGGTTCCCTGGGACATAGGTGATTTTATAGAGATGGCAAGTGAGCTTTCAGCTTAAGCCGCTGGGGGCGATGCTGCGATTAAATTTGATTAATCTTACTGGGCTATCTTACTGGGCGATCGCTGCTGGTTGGGCTGGTCTATGTGCCGCTTTGTGGGATGGCATAGTGGGTTGTAAATTTAAATTAAGCTGGGGGCGATCGCTGGACTTTTGCGGTGGTTTTCAGTAGATTATTGATTGTGACCTTACATAATCTCCACAGGTCGCCCGATCCTTGAAAACCGCATAGTTACGTTGACCTATGGAGATGCCTTGCCTAGCAAGGGTTTCAGCTCTCCAAATTTGATTTTTAGTGGCAATAATGGGCTGTTTTTGGCAATAAAAATGACCTATGGAGATTTGACCTCCAGATGCCGCTCTGGGTATGGGCTCAAAATTGGGGCT # Right flank : AAATAAGCTAGACTCAAAAAAGCCCCATACCAACAATCGCCAATGGAAGAGCTATTGCGCCCCGATCGCCTCTACGACCTGATCAGCGAACTAGTCATGTGCCACTCCCCCAGCGGTGCAGAAGCCGAGATCGATCGATACCTGCTCGCCCAGTTTGCCAACCTAGAGCTAGAACATTGGCAAGATGCCGCCGGAAACATCGTTGCTAAAATTCCTGGCCCCAAAAACAATCCAGCCTCCAACAGCGCGATCGCCATCACCGCGCACAAAGACGAAATCGGCGCGATCGTTAAGAGCATTAACCAATACGGCCAGATCGAAATCGGTAAACTCGATGGCTCCTTCCCCTGGGTCTATGGCGAAGGGATCGTAGACCTGCTCGGCGATCGTGAAACCATCTCCGCCGTGTTGAGCTTTGGCTCGCGGCACATCTCCCATCGATCGCCCCAGAAAGAACTTCAAACCAGCAAAGCCCTGAGTTGGGACGATGCCTGGTTAGA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAACCCATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : CTTTCAAACCCTTTACCCCGCAAGGGGACTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 5 3107210-3106132 **** Predicted by CRISPRDetect 2.4 *** >NC_019701.1 Pseudanabaena sp. PCC 7367, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 3107209 35 91.4 39 ....G.C.............A.............. CGGGGTTAATAATATAAGTAGCTAAACGCACTCATGCAG A,T,C [3107195,3107200,3107207] 3107132 35 88.6 39 .C..G.C.............A.............. CAAGTAGATGAGTTAGAAGTGTTCGCAACACTTTCTAAA A,T [3107119,3107124] 3107056 35 85.7 37 ...GAC.T............A.............. TGAAGCACTCATGTACTCCAGCAACCATCAGGGTAGA A [3107044] 3106983 35 88.6 39 .C..G.C.............A.............. ATGCAGCTACCTTAGCTTTAAGGCCAAGTATAAACTGAG A,T [3106970,3106975] 3106907 35 100.0 35 ................................... GATCCCTTTGAGGGATTCGCCAACTACTTCAAAGC 3106837 35 100.0 38 ................................... ACTTGTAATGTAAATAGAGATCATATAAATCAGAGTAT 3106764 35 100.0 39 ................................... CCTCTTTCCTTCCTTGTTTTGGATCCTCTATAAATACTG 3106690 35 100.0 44 ................................... TGAACATGCCCCCAAAAAGACCGCAGCTATACAAATAGCGGAAA 3106611 35 100.0 39 ................................... TGGCGGTTTCATCCAACACAGCAAAATTAATTGGTGCAT 3106537 35 100.0 40 ................................... TGCAAATAATCCTCTGGGACAACAACAGTTTTTCCAGTTT 3106462 35 100.0 37 ................................... TCCCAAGAACCGATACATGCATTGCACGCGTTAGTTC 3106390 35 100.0 42 ................................... AATTCTTTGTACTGAATTAAATGCGTGAATAGAAATAGCATT 3106313 35 100.0 38 ................................... TCTTTTTGCTCCTGAGTTTTGGGTAAAACCTTCGAGGA 3106240 35 100.0 39 ................................... AAGAACCTTTGGTAAGCCAGGATGAATAAGGTTGGGTAG 3106166 35 91.4 0 .............................AA...A | ========== ====== ====== ====== =================================== ============================================ ================== 15 35 96.4 39 CTTTCAAACCCACTACCCCGCAAGGGGACTGAAAC # Left flank : TTTGGCTACGCCGTCGTTTTCGATCGATGTGGCGGCGAAGCTGGTGAAGCTCTATTTGCCGACGTTTGATAAAAAGCAGGTGAAGCTGATTCAATCGGGGCCAGAAATCACGATCGAAGCGGGCGATCAACGCCATAATTTGTTTTTGCCACCTGAGCTAGCTGGTAAACAGGCGACGGGGGCGAAGTTTCAGGATAGTCATTTGCTGATTTATTTTTAAGGTCTCTTATGGTAGCGATCGCTGCTTCACATAAATTAAAGGTTTTGCTATCGACAAAATGGGGGATTAGTGGGTATTTTAGAAGAGTGATCGACGCAGGTCATAAGATCCTTGAAAACCGCATAGTTTCGTTCACCTGTGTAGATGCCTTGCGATGCAAGCGTTTCAGGTCTACACGCATTGTTTTGATTGGCAATAATGAAGGTCAATTCTCAATAATTATACCCTCCGTAGATTTGTACCTCTCAATGCCACTCTGGGTAGGGGCTCTAGATCAGGG # Right flank : CAATAAAAACCGTTAAATCAATACCAATTAAGGTGCGATCGCCCCGTACAATTTGATCACCCGATCGTAAAATAGCGGGAACTCGAATTACTACCAGCGATCAGCATGACCCAAACCCCCAACCAAGTATTACCACCAGAGCAGCCCAGCGCGCCGATCCTGTGGCTCAAGGAAAACCTCTTCAGCTCGTGGCACAACACCGCCCTGACGCTCATTTCGATCTCATTCATTGCGATCGCCGGAACCGCCAGCATCAACTGGGTCTTCAACCTGGCCGATTGGGAAATCATTGAAGTAAACTTTCGCCTCTTCCTGGTCGGGCGCTATCCCAGCGAACTCTACTGGCGGATCTGGACAGTGCTGGGCATGGTTTGCTTTCTGGGTGGGGCATCCTGGGGCATTTGGGGCAGATTCAGTCGCAACTTTGCGATCCTCACCGCCGTAGTTGCGATCGGTTTGGCTTTTATTGTCCCCGTCGAAGACTTTGCCCCCCGTGTCTG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAACCCACTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 6 3412686-3411179 **** Predicted by CRISPRDetect 2.4 *** >NC_019701.1 Pseudanabaena sp. PCC 7367, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 3412685 37 100.0 38 ..................................... CATGCATTGATTGTCCTAGGTATGCAGGCATGGGCTGG 3412610 37 100.0 37 ..................................... CCAGGGCATCCGCTGTAACTTGCCCCACATGCCTCTA 3412536 37 100.0 35 ..................................... ATAATTTTGTGCAGTTCGTGCAGTTGGCTTGTAAC 3412464 37 100.0 37 ..................................... TTTTACAACTCTACCCGCACCGCTCCCAGCCCTGGAT 3412390 37 100.0 39 ..................................... AAACACCAAAGGAGGGTAGTTAATCATGCCTCGATCATT 3412314 37 100.0 36 ..................................... TCAGTGTGGTTGAGTTATTGTGTAAGGCATCAGTCG 3412241 37 100.0 38 ..................................... AGGCAAAACATAGTTAAGGCGTTGCGCAAGGCGATCGG 3412166 37 100.0 35 ..................................... ATTAAGCTGTTTGGCTCCAATCTGGCGGTGGCAAA 3412094 37 100.0 34 ..................................... AATCCAGGCCAATAAGGATAAGAATTGGCAGCGA 3412023 37 100.0 36 ..................................... CTTTAACTCGCATTAGGGCGATCTCTTGCGAATCGT 3411950 37 100.0 35 ..................................... ATATGGCTTTTACCTTAAGCGACTTACAGGCATTT 3411878 37 100.0 34 ..................................... ATTCACCTCCCCCAATTCCGCGTCAAATTCTGGA 3411807 37 100.0 35 ..................................... GGCAAAACAAGCAAAGACTTATTTCTGATAGTTGG 3411735 37 100.0 42 ..................................... AATGTGGCCTCGATCGTTTTAACCCACCACAAGTTGTCTGTG 3411656 37 100.0 38 ..................................... CCTTAGTGTCGGGTCAAACAAAAGTGGTGTGCGCTGGG 3411581 37 100.0 35 ..................................... ACATACCCTGGCGAAGTTCGCTTCTTGATGCGACA 3411509 37 100.0 35 ..................................... GCGTAGCTCCTGGAGCAATCTGCCCTTCGCCCCTG 3411437 37 100.0 35 ..................................... CCTGGTCTCTGCATCAAGCTGCCCATAATCAAAGG 3411365 37 100.0 40 ..................................... CTGATATAGCTTGTTACTGCATCATTCTCTTTGTCCAGGG 3411288 37 100.0 36 ..................................... GTCGTTCCGCACGGCCAGTATAAATCCCTGGGTGAT 3411215 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 21 37 100.0 37 ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAAC # Left flank : TGGGATCGATCACGTTGAGGATCAAGGCTAGCTTCATTTCTTCCTGCCCAACAATGGCGCTGAAGGGGAAGACAGGACGTTTTTGGGTTAGGGGCTTGGCTTGGGTTACGGTCAAGGTTGGAACAACGGTAAACTTCTATTCAACTTTAGCAATATAGCTTAAAACATTGCCGATTATCTTAAATTCCATAATGTTTCAATGGCGCGATCGGGTTTGTTTTAGTTGTTTGAAGTTTTGTGTTGGGGTGGGTTGTTATATTTCTTAAGGTGCGATCGCTGGACAAACTGTGGTGAAATTGGTTATTTTTAATTCAGGTTCCGCGCGAACCTATAGTGAACCTTGAAAACCCCATAGTTTCGCGTTTGGTCTCGATCGCTTTTTCAGTAGGCGATTGAGGATTTCGACCTCTTTTCTTGTTGTGCTGTTGTACTAACATTTTAAGGGGTTCGCGCAGGTAGCGCCTGGAAGTCTTTCTGGGTCTTGGTTTCAGATACCTGCG # Right flank : CTTGCCAGAGCTAGTTGGCTTTTATCAAAAGCTGGGCTTTGAGGTAAAAGAGTCTGGAAGTGGAGCAATGGTACTCACACCTGAAGCAGCAAGAGAGTTATTGAATAAGTAATATGGCACTTGATAAAGAAAAGATCGATGAATTCGATGGTTTTGAAATTGGCTTCCAAACCAAAGAGCAGGTTGACGAGTATTTACGGCTAGCAAGACAGCAAGCTGAAGAACTCAAGGAGCAAATCCGCTCTGGAAAGGTGCGGCCTATTCCAAGGAGGCAAAGTGAAAGTTAGCCTCAATCAGAATTGCAACGCTCCTTTACCCCGCAAGGGGACAAACCAACAAAAAACGCAACGATCGCCACGAAAAAGGGCACAATAAACCTAACCAACCCAAGCCCAGGAGTAATAAGCCTTGGTAACCCCGCCGCCGATCGAGCCAGACGACAGCCCCGCAGACAGCATAGCGATCAGCGATCGCCCCCTCCCCAAAATCGGCCTGGTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.74 Confidence: MEDIUM] # Array family : NA // Array 7 3695105-3694550 **** Predicted by CRISPRDetect 2.4 *** >NC_019701.1 Pseudanabaena sp. PCC 7367, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 3695104 35 100.0 38 ................................... ACTTCATCCTTCTCCATCGCAACCATAAAGTCGTGCGT 3695031 35 100.0 39 ................................... CATTTCATCACAGAAAGCAGCATAGGTTCTTGTATGGAA 3694957 35 100.0 36 ................................... TTTATCTCTACATCCCCTGCCCGCGCAGCCAGATTG 3694886 35 100.0 40 ................................... AAGAACATTCTCTCCATCGGTGGGGGGCTCCTGTGAGAAA 3694811 35 100.0 45 ................................... TCTTTTCCATCACCCTCCTAGGGTTAAACAAAAAAATACATGCCT 3694731 35 100.0 38 ................................... CCCAGTCTTGGTATGACACAATCTCGATGCATAGATTA 3694658 35 100.0 40 ................................... TAGTTTTTGTAGTTCTTAGTGTTACTGGAGTGGTGTAAAT 3694583 34 94.3 0 ..............................-.C.. | ========== ====== ====== ====== =================================== ============================================= ================== 8 35 99.3 40 CTTTCAAACCCATTACCCCGCAAGGGGACTGAAAC # Left flank : GTTGTCGGTGATTTGCACTGATAAATTGGCAAGGTTTTCAGTTTTGATCGCTAGGCTGATGCGGGTGGCCTGGGCATCGATCGCGTTTTCTACCAATTCCCGCACGACGGCAGCGAGGGAGTCGATCACTTCCCCGGCGGCGATCAGGTGGACTAGTTGGGTGGGTAAGGGTTTGATTAAGGCCATAGGTTCTAGTCTAATGGCGATCGCTGGTTTGGACTAGATGGCGTTGGGATTGAAATGGTTTTACATAAGTTAATGCTCGATCGCTGGACTTTTACGGTATTTTTTAGTAGGTTGTTTATGTGATCTCCACAGGTCGCCAGATCCTTGAAAACCGCATAGTTACGTTGACCTCTGGAGATGCCTTGCCTAGCAAGGGTTTCAGCTCTCCAAAGTTTGTTTTTAGTGGCAATAATGGCATGTTTTTCTCAGTAAATATGACCTATGGAGATTTGACCTCCAGATGCCGCTCTGGGTATGGGCTCAAAATAGGGGCT # Right flank : ATCAACAAAAAAAAAAGAGCTTGAGAAAACCCAAGCCCTTCTAGATATTCAACTGTAATTAATAAACCTAAACCGCTGCGGTCATCTTCTTTTCCGGTGCAGACAAACTAATCGGCGCAGTCAAAGCCTCCTCCAGCGGGGCTCTGCCCAATCGCTCCTCCAGGATGTCCATCACCGCGCGACCAAAATCGGTTTCATCCCGCTGCCATGCCTCCAGGCACACCTCACCAAAATACGATCCCAGCGGTTCCGGGTTCCAGAGCAGTTTTTTCGCATTCCAGGGCATCATGCTCATCGGGTCATAATCCGGCTTCAGGATCTCATTTTTGATCGCATATTCCTCCAGGTGCGTGTGCGGTTGCAAACCAATAAAGAAGATCGCAGGCTCCACCTTATCCCGGCCAAAGATTGCTTCCAGCTCTCGGTGATATGCGATCGTCTGGCGGATCGTATCAAAATTTTCATCGATCACATTAAACGAATAATTCACCGACACCAGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAACCCATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 8 3888831-3888433 **** Predicted by CRISPRDetect 2.4 *** >NC_019701.1 Pseudanabaena sp. PCC 7367, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================ ================== 3888830 29 100.0 48 ............................. AAGCTAGAATCCTACTCAAGGCCATCCTTGGCTGGAAATTGAGTTTCA 3888753 29 100.0 46 ............................. TCTACTGAGCTTGAAAGTGCACCTTCTCAGACTCTGTCTCGTTTCA 3888678 29 100.0 45 ............................. ATGCAGACGAAGACGACGATTGTCCAGATGGATATAAAAGTTTCA 3888604 29 100.0 43 ............................. ATGAGCCTGTTCCCACTCCCCCTAATTAGGGGCTAGTGTTTCA 3888532 29 75.9 41 ........A.......A.A..CA..C..T GGAATTGACACAGGACAGGACGATGGCACACAGCCGTTTCA A,A [3888507,3888511] 3888460 28 86.2 0 ........AT...........C..-.... | ========== ====== ====== ====== ============================= ================================================ ================== 6 29 93.7 45 GTCCCCTTGCGGGGTAGTGGGTTTGAAAG # Left flank : CCTGCCCTGAATATAATTTTGATGATTCTATTATCCAACTAATCGGCCGCTTGATATCAAGCTTTCCTGACCGAGCTAGATTTTCGAGCCAATTTTTAAATAGGTTCATCTGGGGCGGAGCGATTGCTCACTCTATATCTGATTGGCAACTCTTATAACTCGCCGTGTTCTTCGAGCCATTCGGTGATGCCTTCTTCCAGGTCTTGGAGGGCTTCATCGAGGCTGGCGTAGCTGTTGCCGCCCTCCCAGATCGGATCGCCTTCTTTCATGGCGCGAACGTATGAGTCGCTGTCTTCGATGTCGCCAATTTCGATGTAGCCGTAGGATTCTACCCAGATCACTATATTGGGAAAATTTGTTTCAAACAGGTTTGCCATTGTTTAACAAGGTTGCGGTTTCCTTTTCCAATGAAATCATCCTATTCGCATTTTTGCTATGGCGCTAGGGGTTTTCTTAATCTATTTTTTATTTGTTTTGTTTTTTGCGCTTTTTAGCAGTTT # Right flank : GTTGAAAACTCAGGATGTTCCCTGTGCATGGGAAACCAGGAAAAAATATTTCAGTCCCCTTGCGGGGTAAAAAATTGGAGGACTGAACAGCTTGCATAACAAAAAACAAGCTCCTCCAAACGATCGAAAAAACTATTTAGTTCTCAAGGATCGGGCGACCTCTGGAGATCACATTAATAATCTACTGAAAATTCCAGCCAATGTCCAGCGATCGGCCATTAACTTATGTAAATCAACCAGGCTCAAGCAAAAATCCCCTAACCCATAATATTTTTGAAAAACGCGATCGCCTCCCGCAGATGCCCCATAAACGCATCGATCTCCGCAACCGTATTATAAAAATACAAACTCGCCCTGGCCGTCCCCGTGATCCCAAAATGACTATGCAACGGCTGCGTGCAGTGATGCCCCGATCGGATCGCCACGCCCGATTGATCCAGAATTTCCGCCACATCATTAGCATGAAAACCAGCCTTCGGCGCAAACGCCACCAACGCCGC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCTTGCGGGGTAGTGGGTTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //