Array 1 2744717-2748655 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058289.1 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 2744717 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 2744777 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 2744837 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 2744897 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 2744957 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 2745017 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 2745077 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 2745137 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 2745197 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [2745249] 2745249 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 2745309 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 2745369 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 2745429 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 2745489 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 2745549 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 2745609 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 2745669 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 2745729 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 2745789 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 2745849 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 2745909 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 2745969 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 2746029 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 2746089 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 2746149 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 2746209 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 2746269 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 2746329 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 2746389 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 2746449 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 2746509 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 2746569 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 2746629 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 2746689 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 2746749 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 2746809 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 2746869 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 2746929 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 2746989 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 2747049 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 2747109 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 2747169 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 2747229 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 2747289 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 2747349 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 2747409 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 2747469 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 2747528 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 2747588 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 2747648 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 2747708 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 2747768 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 2747828 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 2747888 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 2747948 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 2748008 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 2748068 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 2748128 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 2748188 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 2748267 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [2748291] 2748327 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 2748387 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 2748447 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 2748507 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 2748567 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 2748627 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTA # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-77] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //