Array 1 103068-104262 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH792313.1 Bacillus cereus VD048 supercont1.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 103068 32 100.0 32 ................................ TTAGAACCTTATCATAAAAGTTCCAAGGTCAA 103132 32 100.0 34 ................................ ATATAACTTTGCTGATATGTTTAGAGGTTCAACA 103198 32 100.0 33 ................................ ATAGATTGATAGCTAGGACGGTCAAAGTGCTTC 103263 32 100.0 35 ................................ ACGTATGAAACGATTGAAAAAGAAGATGGTGAAAA 103330 32 100.0 34 ................................ ATTGTAGTAATTCCCCTTTGCTCATTAGTATGTT 103396 32 100.0 34 ................................ ATTATTTAACGCATTAGACTTATTGAAAGATAAA 103462 32 100.0 34 ................................ GGCTTAAATTGGGTGATATGTTTTAATACCATAC 103528 32 100.0 34 ................................ TACTAAGAAATCCATAGAAGATATTTGCAATAAA 103594 32 100.0 34 ................................ TCCCCTTACTCAAATTAGACATCTATAACTACCA 103660 32 100.0 34 ................................ CTATAAGGAGCGAAACGGAATGAATTTGAGAGTG 103726 32 100.0 34 ................................ AGATTAGAGGACGTAGAAAATCATTTGGATTTTC 103792 32 100.0 34 ................................ TTTAAAGGTTCGACTATTACAAGCCTCAAATCCA 103858 32 100.0 34 ................................ GAAGAGTTCATGTCTAATGCAGGTAAAGTAGAAT 103924 32 100.0 35 ................................ AATAAGAACAAAGCTGGTGAGGAAGTCGAACTTGA 103991 32 100.0 35 ................................ ATACAATGGCTTTTTAGCCTTACAAGAATTATCAA 104058 32 100.0 32 ................................ TTTAATATGAGCGCCCGTTTCAGGATATTTAG 104122 32 90.6 34 .........T..........A..........A ATATGGCAATTATCAAATGAAGAGGAAGGCAAAA 104188 32 96.9 9 ....................A........... GAATCATGT Deletion [104229] 104229 32 90.6 0 ..A...T......C.................. | T,T [104235,104240] ========== ====== ====== ====== ================================ =================================== ================== 19 32 98.8 33 GTCGCACCTCTTGTAGGTGCGTGGATTGAAAT # Left flank : AATTGAAGAGAAGCCAATTAGTATTTTAAATCAAGAGACTCCTAGTAGCATCGAGTTTTATATTGAAAAGATGAATACGTATAAAGAAAAGAATAATAAAAGTATACGTGAGTTAGCGAAAGAAATTGATATTTCGTATTCAACGCTTTCTAGGATGTTATCCGGTAAAAGGAAACGATTAAATGATGATACAAAGAATAAGCTTGATAAGTGGATAGAGAGACAAGAGGTAGTTAATTTATTGTAAATTATGACTTAATATATATAGGCTATTGTCGAACATATTGGTGTAAAAGAATCAATTGATTTAGAAAGCTCTTTAATTTTTTAGGTGCGAACGTATAGTACACATGAAATTCCTAGTACATTCGCACCTGGAATTCTCATAATTTATGATTGGAATTTATGATTTTTATACAAATTACTTTATAAAATAAAAATATTTGTATACTTTTGAATAGAATTACCGTATTTGTGTGTGATTTTGAACACAAATCGGG # Right flank : TATCACAAGATTGAGGAAGAAGGGGTTTTTAAGGTAATACTTTAACTTCAAAACAGTCTTCAGCTTATTAGATACTCAACTGGAAGTATCTATCTGCAGTATCTAACACACATGTTAAAAATATAAATTGGAGGGAGATTGAATGACCTACATTGCTCATATCCGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCGGGCATGCTCCATGATTTAGGTAAATATACCAATGAGTTTAGAGAGTACATATTGGAAGCAGTAAATAACCCTAATTCTTCATCTAAAAGAGGGAGTGTTGATCATTCAACTGCAGGTGGAAAATTGTTATATCAATTATTCCATACAGAAAATATCATTCCTTATAAAGGAATACTATCTGAGATAGTAGGAAATGCTATTATTTCCCACCATGGATACCTTCAAG # Questionable array : NO Score: 9.09 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCTTGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 112645-113007 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH792313.1 Bacillus cereus VD048 supercont1.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 112645 32 100.0 35 ................................ AAAATATAACCCTTTAGCACTGTTGGGTAGGTTAA 112712 32 100.0 34 ................................ AGAAATGACCTTTTGTATAGGTTCGTCTTGGAAT 112778 32 100.0 35 ................................ TTTTCATTAACCAATGAAAGAAGAAAGCTTGTACG 112845 32 100.0 34 ................................ CCTATAGCACTAGGGAGAACACTTACTGCAAGTC 112911 32 100.0 33 ................................ AGATATTCGACCTACATTTAATGAAGTTTCTAC 112976 32 78.1 0 .........T.CG..........A...A.G.C | ========== ====== ====== ====== ================================ =================================== ================== 6 32 96.4 34 GTCGCACCTCTTATAGGTGCGTGGATTGAAAT # Left flank : AGATGAGTATCCACCATTTTTATGGAAGTAGGTGTAACATTTGCTAGTATTAATTACGTATGATGTAAGCACTGTTGGCGGTGCAGGACAAAAAAGACTGCGGAAAGTTTCAAAAGTATGTCAAAATTATGGTCAACGAGTCCAAAACTCAGTGTTTGAATGTGTTGTTGATGCAACTCAACTTGCTACTTTAAAAATGGAATTAATTAAAATTATTGACGAAGATAAGGATAGTCTCAGATTTTATCAGTTAGGTAATAACTATAAAAATAAGGTTGACCATATTGGTGTAAAAGAATCAATAGATTTAGAAGGTCCTTTAATTTTTTAGGTGCGAACGTATAGCATACATGAAATTCCTCGTACATTCGCACCTGAATTTTCATAATTTATGAGTAAAGTTTATGATTTTCTATGCAAGTTTCTTTATCTAATAAAAAAACTTGCATATTTTTGAACAGAATTAACGTATTTGTGTAGGATTTTGAACACAAATCGGA # Right flank : CTGGTAAGATGCTTGATAATAATTTAGTGTCTCTGTTGGAGTAAGAGGACCTGCTTCAATTCAAACGGCAACAAGTGTTGATCCGATTGACATTACTAGTATGCAGATTACGAAAAGTATAAATTCTGAGCCTGGGAAGGATAAAGGTTCAGATACGATGGGGATGAAGCAGCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATTAATACACAATTAGCAGAAAGGACAGGTTTTACTAACGAAGATGCGGAAAAGATTAAAAATGCACTAGTTACATTGTTTGAAAATGATGCGTCAGCAGCACGCCCTGAAGGAAGTATAGAAGCACATAAAGTTTGTTGGTGGGAGCATAATTCAAAACTTGGTCAATACTCTTCTGCAAAAGTACACCGTTTACTGGATATTAAGCAGAAAATTGACCAACCAAAAACAATTGATGATTATACTGTCTTAATACTTGAATTAGATGGTTTAAAAGTTGAGATTATTGATG # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCTTATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //