Array 1 1607-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZGM01000034.1 Limosilactobacillus panis DSM 6035 NODE_62, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1606 30 100.0 37 .............................. ACTTAACTCGGTTCCAGTCAACGTGAGCTAATGTGTA 1539 30 100.0 35 .............................. CTAACAACTTGCTTAATTTCAGTCCTGTTCTTAAT 1474 30 100.0 37 .............................. CATAATTACGATTGGGGATATGATCCACAAAATGAAA 1407 30 100.0 38 .............................. CTCAGCTAGTCAAGTGCAAGCTTAGGAGGTATAAATTA 1339 30 100.0 37 .............................. CCCAATCATAGACTTGGTCATCATTGATAAGTCCTTG 1272 30 100.0 37 .............................. GCTAAGATTATCTTGAAAGAATGAGTGATGAATACAG 1205 30 100.0 37 .............................. CTCCATTAAAGCGTCGTCCCTGTGGTCATAAACACTT 1138 30 100.0 36 .............................. CGATAAGCCACGCGTTGAAATCGAGGTGAAGGAAAT 1072 30 100.0 37 .............................. CCGTAGTTCCGGTAAGGATTGTCAGGGTCCTTTTTGT 1005 30 100.0 35 .............................. GTCGTCGATGGCACTGGTCAGATAGGTCATTAGAT 940 30 100.0 37 .............................. CCCCCGATTCCAATTGTGGTAAATGCAACTTTAGAAG 873 30 100.0 37 .............................. CTGGTCTTGAATCGTGATATGAAAACTAGTCTTCGGC 806 30 100.0 37 .............................. CCAGACCGCTTGATTACTAAAGACGAATATATGGATA 739 30 100.0 35 .............................. TAATATTAATCCTCAATCCAGTGGACTATTAACAA 674 30 100.0 36 .............................. TTCGGTTTCACCCAAGATCATTTCAGCTCCTTCAGT 608 30 100.0 36 .............................. ATTACCAGGATTGCCTTGTACACCCTGTTCTCCTTG 542 30 100.0 36 .............................. TGCAAGGCATAGCAAAAGCCCGTGCAAGCCAGCTAG 476 30 100.0 36 .............................. ACAGATCCCCCTTATGATGTTCACGCCAGAAAAGGT 410 30 100.0 36 .............................. TTAACCGTGATTGCTTGGACGCTGATTCCTTTTATA 344 30 100.0 37 .............................. TGGCTAATTGACGATGACTTGGATCCACCTCATTAAT 277 30 100.0 36 .............................. GTAGCCCCTAGAAGTAGCATTCCTAACCAAAATTTT 211 30 100.0 37 .............................. CAGAACTGTTTGTAGCAGCAAATGCTGTCTCGGTAGT 144 30 100.0 38 .............................. ATCTCATCGCCCCAGATTTGTAACCACTTTCCTGTCTT 76 30 80.0 0 .....................CTG...CTT | ========== ====== ====== ====== ============================== ====================================== ================== 24 30 99.2 37 ATTTACATTCCACTTCTATTAGATAAATAC # Left flank : ATATGCCCTGTGATACCAAGGGATCAGTCTGTCTTCATACTTTCAAGTTTCAGATAAATACTAAAATGTAAGTAAGAATAATAAAGTAGTATAGG # Right flank : TGAAAGCCCTGAATTGCAATGAAATCATTGTGGTTCAGGGCTTTTGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCACTTCTATTAGATAAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 24406-23913 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZGM01000004.1 Limosilactobacillus panis DSM 6035 NODE_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 24405 30 100.0 37 .............................. ATCCTTGGGCAGGTATGGATTGCTCGGGGTATGTTTC 24338 30 100.0 36 .............................. TGATTCATTTACTACTCAAGCTCAACTAGCTTTTGA 24272 30 100.0 36 .............................. GACTTTAGCTTCGGCTATTAAAAAGCCCCAAGTTAA 24206 30 100.0 36 .............................. GACCTAGTTATTACTCATAGTATTATCTTTTATACC 24140 30 100.0 36 .............................. TTAAAGCACAATCACCATAAACGTAGAACACTTGTT 24074 30 100.0 37 .............................. AGTTCCAGGATAGTCAACTGCAACAGCTCAACGTGGC 24007 30 96.7 35 .......................A...... GGATCACCCCCACATACATGTGGGATACACTTAAA 23942 30 86.7 0 ...................A...CA.G... | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 97.9 36 GTATTTATCTAATAGAAGTGGAATGTAAAT # Left flank : AAAAAAGCCAATAACCACACGCCTTTGGCGTGATTATTAGCTTTCAAGTTTC # Right flank : TATAGTTACAAAAAAGAGGTGCCCCATGGCAACCAAGCTAGACAAACAATTCACCCAAGACGTCCTAAACACAGTGGACTTAATCCCGTACGGGCGCGTCACAACCTATGGCCAGATTGCCCGCATGATTTGCCGCCCGCGCAACGCCCGCCTCGTTGGTAAGGCGCTGGGCAAATTTGGCGGGTGCGGTAAGCATCCCTGCCACCGGGTCGTCACTGCAAACGGTCGGTTAGTGCCTGGCTGGATTGACCAACGACCCATGCTAGAAGCGGAGGGGGTGCCGTTCAAAGATGCGACCCATGTCGACATTCAAAAATGTTTTTGGCGCGGCATCTAGTTCCCGTAACCTGGCTCCGTGGCCGATTCCACGCTATGCCGCCGTCCAGCGCCAGACCAAGAATGGCTACGTCCAGGTCAAATACACCTGGGTAGCGGCCGACTGGCATTACGAGGCCCGCTGGCATAGTCGGGTCCCCACCGCCCAAATCATCACCTACCCA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTATCTAATAGAAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //