Array 1 48085-49371 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADNIZ010000025.1 [Ruminococcus] gnavus strain 1001285H_161024_A10 NODE_25_length_52505_cov_47.4857, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     48085	    32	 100.0	    35	................................	TGTTGCAAGCTTGGAACAGAACATAGGCGGTGTTG 	
     48152	    32	 100.0	    35	................................	TGGAGAATTTTTGAGAACACAGGTTGTTCCGGAGC 	
     48219	    32	 100.0	    34	................................	CAGAATATGGAAGATGCATCCGTGAAAGTGAGCG  	
     48285	    32	 100.0	    33	................................	TTTTCTGGTCAGCGCCGTATTGACTCCCGTGAT   	
     48350	    32	 100.0	    34	................................	AATGACATCGAATTAGGAAAGTACATCGAAGTAC  	
     48416	    32	 100.0	    34	................................	CACTCTCAGACAGCGAATGATATCGGTCTTCCAT  	
     48482	    32	 100.0	    34	................................	CAACATGACGGATATCCAAAATGCTTATCAGGGA  	
     48548	    32	 100.0	    35	................................	CCGCAAGGTGGACCATATCGATGGATAGATTTACT 	
     48615	    32	 100.0	    33	................................	ATGGTTGTGAGTGATATCGTAGCTTACCGGAAC   	
     48680	    32	 100.0	    34	................................	TGCATAATGATAGAAAGCATATGCATACCCATAT  	
     48746	    32	 100.0	    34	................................	ACTGATGAGACAGATACTATTATCACCGGAGTGT  	
     48812	    32	 100.0	    34	................................	AACGTAAAATACAAACTAATCAAAAAGGAGAATA  	
     48878	    32	 100.0	    36	................................	TTTCTCTGCTCCGCCGCCACAGATTAAAGCAAAAAT	
     48946	    32	 100.0	    35	................................	TGGCTTACCCTATGCCTATACGTGCAAATATGATC 	
     49013	    32	 100.0	    33	................................	GTGCATCTGCTTACAAAAGTCTACCGCTTCTTC   	
     49078	    32	 100.0	    34	................................	ATCACTCCACCTCCAACAGTTCAAAATATTTTTC  	
     49144	    32	 100.0	    34	................................	GCGATATCATCTGCCATGCTACTGCCGCCGGAAT  	
     49210	    32	 100.0	    33	................................	TATGCTCATTTGCCCTGGTATGTTTTTGCCTTC   	
     49275	    32	 100.0	    33	................................	CAGGCGGGACTTTCGGATAATTGGATCCATTAA   	
     49340	    31	  90.6	     0	........................-.G..T..	|                                   	T [49368]
==========	======	======	======	================================	====================================	==================
        20	    32	  99.5	    34	GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT	                                    	       

# Left flank :   ATCCGGTATTTCTCTGGAAATGAGGCGAAAATGGGATGTTAGTGTTGATTACATATGATGTGAACACAGAAACAGCGGCTGGAAAGAGGAGATTGCGCCAAGTGGCAAAACAGTGTGTAAATTATGGGAGAAGAGTGCAAAATTCTGTATTCGAATGTATCTTAGATAATGCACAGTGTGTTATGCTTAAGGCAAAACTGACAGATATCATCGATGAAGAAGTTGATAGTTTGAGATTTTATTACTTGGGAAATCAATATAAAACAAAAGTCGAACATGTTGGTGTAGACAGAGGAATTTCGGCGGATGGAATTCTTATTATGTAACTGGGGTGCGGATGATAAGCAAACATAAAAATGCTGGGAGATTCGCACCAAAAAAATGCACAAAAATTAGTTGAAGAGGTGAAAGTTAGAGAAATATGATGAGGAAAAGAGAATGATATTGGTAGAATTGAGTAATATTAAAGAATATAAAGCCTAAAATTAGGCAAAATTGCT
# Right flank :  TGTGGTGGACGAGCTGCCGGAAGATGCCGATGATTTCCGGTATCCGGGAGATGCGATCGAACCGGAAATACAATCGGAGTTGGAACGTGCATTAAGCGGGGAAACGGTATTGCCGGAGAAGATTCTGGATACAGACTGGGGAAATATTTTTATTGCTTATTATCCGTTGTATAATGAATCAGGAGAAGTCATCGGTGCACTTGGAATAGAAGTTGCGGCAGATATAGAAGCCGAGGCGGTACATGACAAATCCATTATACAGAGACATGGCAAATACTGATTTTATGACAGAACTAAAGAACAGAAATTCTTATGAGACAGACCGGCAGAACCTGGATGCAAAGAAGAAATGGAATGGCCTGACAGTGGCAGTGATCGATGTGAACAATCTGAAGCTGGTAAATGATCGGCTGGGGCATGCTGTGGGTGATGATTGTATTGTGAATGCAGCACGGGTCCTGCAGAGTGTTGAATCTCAAAAAGTTACGGCGTATCGATAC

# Questionable array : NO	 Score: 9.23
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-5.00,-5.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [75.0-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.68,0.74   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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