Array 1 371558-376346 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDIO01000006.1 Actinomyces denticolens strain DSM 20671, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 371558 28 100.0 33 ............................ GGCCCGCGCTATCAGCGCCGAGCTCCGCTCCAA 371619 28 100.0 33 ............................ CGGGCCCCGCGACCTCTCAGTCGTGGGGCCCGT 371680 28 100.0 33 ............................ GACCCTAGGGGCGGATCTGGCGTGGGTAGAGAT 371741 28 100.0 33 ............................ CTGTTACCGCGATCGAGGCCGCCCGTCGCTCGG 371802 28 100.0 33 ............................ GGTCCTCAAATCGTCGGGAATCAGACAGATACA 371863 28 100.0 33 ............................ CGCAATCACATCGCCGGGCTTGGTCATCAGGTA 371924 28 100.0 33 ............................ TACGGCTCGATTCTCATCACCCGATGAATAACT 371985 28 100.0 33 ............................ CGTCCGCCGAGGCTCCAAGCGCTTCGAGGACAA 372046 28 100.0 33 ............................ CTCACACCCCCGTGCCGTAATCCCGGTCACAGC 372107 28 100.0 33 ............................ TGAATGTCATTTGCATTACCCATTCGAGTAGGG 372168 28 100.0 33 ............................ GGCGACGCGACCATCACGGGGCGCACGCGTCAT 372229 28 100.0 33 ............................ GGGGGGCGCTGAGACGGACGTCACTCCGGGCCG 372290 28 100.0 33 ............................ CATGGGGCGTCACTGCCGCCGTCATCTTGGTTC 372351 28 100.0 34 ............................ ACCCCCCCGCCTCCCTCGACGCCGGGGCGCTGGA 372413 28 100.0 33 ............................ GAATCTTACTGTCCATTGCTCCTCACTCTCCCC 372474 28 100.0 33 ............................ CCCGACGAACAACTCAACAGAGAGGAGGCCCAT 372535 28 100.0 33 ............................ CGACGACTCGGCGCTCCGGGCCGGCCTCGGCAT 372596 28 100.0 33 ............................ GCACCACCGAACCGAAACTCGCCACCCGCCCCG 372657 28 100.0 33 ............................ CATCCCCACCAGCAGAACGGAGCCCCCCTCATG 372718 28 100.0 33 ............................ CTGCGGCGCCTCCAATGGGTCGACGACTATCTG 372779 28 100.0 33 ............................ TGCGGGCGGCGACCGCATCGAGATCTCCTCGTC 372840 28 100.0 33 ............................ CAAGAGCGCCTACCTCGCCGTCGCGCGAGCCAA 372901 28 100.0 33 ............................ GGTCCGACCTGCCCGACGATGTTCGGGAGCATC 372962 28 100.0 33 ............................ TTGCCGGAAAGGCTGTTCTCATACCGCAGGATA 373023 28 100.0 33 ............................ CACCACGCCAGAAAGTCCTCGTGAACATCAAGA 373084 28 100.0 33 ............................ GATCGGGCAGACGTCGGAGAAAAGCCTCCGCAA 373145 28 100.0 33 ............................ CACGGCGACGATCAACGGCGGGTCCATGCGTGC 373206 28 100.0 33 ............................ CATCGTCGTTGGTGAGCCAGCCGCGTGCGCCCA 373267 28 100.0 33 ............................ ATCGTATGGTGCCAAGAAGTTGGCGATCCGGAA 373328 28 100.0 33 ............................ GGTCGACGGGGCCGGGCAGGGGAGAGGTCGAGC 373389 28 100.0 33 ............................ GATCGCCCCAAAGAGTAAGGAGAAAGCGCTTGG 373450 28 100.0 34 ............................ CCGGGGGGGGATTCTGGGAACGCGGAGAACGAAA 373512 28 100.0 33 ............................ CCGCTCCCTCATGCGGACCACCGCCCTGCAGCC 373573 28 100.0 33 ............................ CGGCGTGATGTTCGTGATGCGCGATACGGGCGG 373634 28 100.0 33 ............................ GGACGCCCGGGGTCTATCAGGCGCCGTAATCGA 373695 28 100.0 33 ............................ CATTAGCGGGTATTTTCAGTTGACCCGTATTCG 373756 28 100.0 33 ............................ TTCGGGTCGCCTCACGAATTGGAGGTCTCTTGC 373817 28 100.0 33 ............................ TGAAACTCGGCAGGCCCGTACCGTTGTATCGCT 373878 28 100.0 33 ............................ CAGGCGGTCCACCCGCCCCAGGGCGGCGATCTG 373939 28 100.0 33 ............................ CAGCCAGGCGCCTGACCACCCGCCACGTCGTGC 374000 28 100.0 33 ............................ CCACTCGGGGTCCCAGACGCCGACCTTCTCAAG 374061 28 100.0 33 ............................ CCTGGATATCAAAGTCCGGGGGCACGGCATCAC 374122 28 100.0 33 ............................ GGAGACACCATGAACCGCGTCATCCGAGAATCC 374183 28 100.0 33 ............................ ATGGGCGGCACAAAAGACGTGACAATCAACCGC 374244 28 100.0 33 ............................ GTCGAAGACCGGGGAGGTTCGCATCAAGGTCAC 374305 28 100.0 33 ............................ CCGCTCCGCAGTCACTACAACTTGCAGGATGTC 374366 28 100.0 33 ............................ CCGCGTATACCGGTAACCGCATATCAACATACA 374427 28 100.0 33 ............................ TTCTGTGCGCTGTCATCCCCGCTATCGCAGAAG 374488 28 100.0 34 ............................ CCCCCCCGAAGAGACTGCGGTACTTCTCTGACAT 374550 28 100.0 33 ............................ GAGCGCGAAGCAGTCCGCAGAGGAGTCCGTGGA 374611 28 100.0 33 ............................ TCGAGCGAGCTCACGCTCGTGGTCGAGGCCGGG 374672 28 100.0 33 ............................ CTCCTCGCCGCCCAACTCCCCCAAGCCCTCCAG 374733 28 100.0 33 ............................ CTGGGTCCGGCGCGCCGTCGACGATGCACGCCG 374794 28 100.0 33 ............................ GACCGACGTGCGCGGCCTCTCCAGCAGCATCGT 374855 28 100.0 33 ............................ TGGCCACATTATTCCAAAAGTACGTCCATTTCA 374916 28 100.0 33 ............................ GGGTCGCCATGCAATCAAGGTAAGTGAGTTTCA 374977 28 100.0 33 ............................ GGGCTCGTCGAAGGGTCAGGGGTCGTCGTCGCA 375038 28 100.0 33 ............................ CGCCAGGCAACCGATCAGGAGGCTCATCATGAG 375099 28 96.4 33 ............C............... TGTAGAACGCACTGCGCGTCATCATCTCCAATC 375160 28 100.0 33 ............................ CAGGGGCCGCATATTGCCCGTGTAGAAAACGCC 375221 28 100.0 33 ............................ TCTAGTCCGCTACTGCGGAGAGAATCGTGGATT 375282 28 100.0 33 ............................ TCTAGTCCGCTACTGCGGAGAGAATCGTGGATT 375343 28 100.0 33 ............................ CTGCGGCAACCCCACGGACCTGGAAGCAATGAC 375404 28 100.0 33 ............................ AGGCGAACCCGACCCACGCGACCTCGTCGAGCG 375465 28 100.0 33 ............................ GGAGGGCATGATGAGCGACGTCATCACAGGGCG 375526 28 100.0 33 ............................ CAGTGGGGCAGACCACACCTCAGACGTCTGATG 375587 28 100.0 33 ............................ CGACGTCCTGGCCGCCGTGGCCACGGGCCAGGC 375648 28 100.0 33 ............................ CGCGCCGGCGATGACGAAGGTGTCGGTCCCATA 375709 28 100.0 33 ............................ CGCTTCCCACCGTGCGCCTCACCGTTGAAAACC 375770 28 100.0 33 ............................ TGCTGCGAAGATCCTCTACCGCACCCGAATGGA 375831 28 100.0 33 ............................ TCTATGGGACCCTCCGGGCAATTAATCCGGCCA 375892 28 100.0 33 ............................ CCTATGCCGGAAGCCCCTGAGTTCAACCTCGAC 375953 28 100.0 33 ............................ CTCGTAGTGGATGAAATAGATTCCTGGCGACCC 376014 28 100.0 33 ............................ CGAAGTCTGCCGTGCCCCGGATAGGACCGAGCC 376075 28 100.0 33 ............................ TACGTCCCCCTCCAAACCGCCTTTCATCTGGCC 376136 28 100.0 33 ............................ CCGCCCCGTGCCGTGAGAGGCACGGGGCGGCTC 376197 28 100.0 33 ............................ GACCTACCGCAGCACCCCGGCCATCCTGACCAT 376258 28 100.0 33 ............................ CGAGGACGGGATGAAGTTCAGCCCTGACGACTC 376319 28 96.4 0 ................T........... | ========== ====== ====== ====== ============================ ================================== ================== 79 28 99.9 33 GTGCACCCCGCGTATGCGGGGATGATCC # Left flank : CGTCTCCGGCGGAGCGAACTACGCCGCGATCGAAGCAGAGGAGGCAGGTAGATGGTAGTCCTGGTCCTCACCGCCGCTCCCGCACAATTGCGCGGCTCGCTCACGCGTTGGCTGATGGAGGTCTCTCCCGGAGTGTTCGTCGGGCATCTCGCCGCCCGGGTGCGCGAGCAACTATGGGATCTGGTCAGGGCTTATATCGGGGATGGCCGCGCGCTCCTTATTTGGTCCACGAGGTCGGAGCAACATTTCTCTGTGGCCTCGCTCGGCCACGACCGGGAACCTGTGGACATCGAGGGCTGCCTGGTGATGCGGACTCCGTATCGGGCGATCGAAGGGTCGCAGGCGATCCCCGGGGTTGTGAGGCCGGCGAAGGAGTCCTGGTCCGTCGCCGCTCGTCGACGCCGCTACAGGAACTCGGCGGAACGGGCTCTAGGTAGGGAGTGAAGGCAGAAGGTTTCAGATAGGTTACGATGCTGTTGGGATCCCAAGGATCACCAAGT # Right flank : CCGTCGGCAACCGTATCAAGAAGCTCCTCACCCCATACATCTCGCGTATGAAGAGATACGGGGAAGATCCCTGACCGACGCGAGCGCTACCGATGCCGACGTCGCATATCTTGTACATACGGAGATGACCCCAACGACTTATCGAAGCCGGCCTTATCGATGGCACACCTCTCGCATATGCGAAGACAACCTGCGTCACAATGAGTTATGGAACCAGCCCCACAGACACGCTCCAGACCAATAGGGGAATCCCATAAGTCAATCTATCCTTGATTGCTTAATGAGATTCCAGACAAGCCTAGTGGTCCACATAATAAACTATCCATATCAAAGAGTCATTAATTCATATCTACACATCAAGGAAATAGCACACTATAACATATCGTCGAAGCCATTCAATCCAGATAAATGAAGATCGATGACAAAAAGATAAACCATAAGCAGCGTACCACCAAAGGATATATCTATCGATCTCCATGACCTGTATGTGGAGCAAGGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACCCCGCGTATGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //