Array 1 121985-123111 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZDN01000011.1 Escherichia coli strain ED1914 EC1914_c11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 121985 29 100.0 32 ............................. CTCGCGTATACTCTCTGCCAACGTCTCCAGAT 122046 29 100.0 32 ............................. GCGGGATTATCGGCACTGACGTCGGCGCTGTG 122107 29 100.0 32 ............................. GGTCGCTTCCATATATGAACCTTGAGGATTAG 122168 29 100.0 32 ............................. GTTCCATGCACTGCCCGCAGTGTCAGCCGTAC 122229 29 100.0 32 ............................. GTAAATCATACGTTGGCATCAGTATTTTTCTC 122290 29 100.0 32 ............................. ACTCCGCGCCATTTGAGAATTCTCAGTTCTGC 122351 29 100.0 32 ............................. CTACTGCTGTCAGACGGCAGGGCAAAACAGCG 122412 29 100.0 32 ............................. GACGTGCGGATGCTGTTTCTGGTTTTACCTCC 122473 29 100.0 32 ............................. TTTTTTCTCAGCGTCTGGCAGAGCTAATCGCC 122534 29 100.0 32 ............................. GTGTCAAATTTCATGTAATTGATGATCCAGCT 122595 29 100.0 32 ............................. GGTATTTCTCGTTAACACGGTCGTATCAAAAC 122656 29 100.0 32 ............................. AGGGGTTGCAACCATAGCCCTTAGTTGATTGC 122717 29 100.0 32 ............................. CCAGTGGATTTTAATAAACTCTCCAGCGAGCA 122778 29 100.0 32 ............................. TTCGCCACGTCAGGCGTGATTTCCTGCACTGA 122839 29 96.6 32 ...........................A. GGCGCGTCTGCGCCCGCTAGGACTCGTGTCAA 122900 29 96.6 32 ............G................ GGAGTTCAGACATAGGTGGAATGATGGACTAC 122961 29 93.1 32 ............TT............... CCCGGTAGCCAGGTTTGCAACGCCTGAACCGA 123022 29 93.1 32 .................A........T.. GCAACGACGGTGAGATTTCACGCCTGACGCTG 123083 29 89.7 0 .T.........AT................ | ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.4 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGTGTTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCTGTTTCACTGGGAGATGCAGGCCATCGGAGTAGCTGAAATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTGTCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTGAGA # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAACCCCATCAAGACGCCTTCGCCAGTTCCTTCACTAGCGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGCGCCTTATCAATATGCTGTTGATTATCAAGCCTTACATCATGCCAGCTATTTCCCGCCGGGAAGGCCGGTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCTGCATCGTTACAACACCCAGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTTGTCGCTGCAATCCCATGATTATGCGCAATTGCCAGCGCTCGATCACGGGTTAATTTCCTGACAGCCTCTGGTGTATTTACACCACTATTAAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //