Array 1 92956-91264 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDDB01000004.1 Moorella thermoacetica strain DSM 6867 MOCA_contig000004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 92955 37 100.0 35 ..................................... CGTATAGCCGAAAGGCTTGCACAGCCTGGCGTATC 92883 37 100.0 35 ..................................... CTGTCCTGATTAGACCTTTGGTAAGACCGTCTAAT 92811 37 100.0 35 ..................................... CGAAAAATTTTTTGAGGATTTTTTTCGGGCGAGAG 92739 37 100.0 34 ..................................... ACTCGTTCGCCACTCTTTCAAATGGCGAACAAAT 92668 37 100.0 35 ..................................... TGGAAATGTGGTATAATTTAAGCAGGTGAAGGTGC 92596 37 100.0 35 ..................................... AACATATTCTTGGACTTGATCGGATATGGATCTAC 92524 37 100.0 35 ..................................... TGGATGGCAAGGAATATAAGGCCCCGAAGCCGAAA 92452 37 100.0 34 ..................................... TGACGGTGCTTTTAACCCTTCGTCTGATACGCAA 92381 37 100.0 35 ..................................... TGCAGGGCCGGAAGCTAGAGGACCACCGGAAGGTC 92309 37 100.0 35 ..................................... ATCTTGTATCATCTCAATCGTTTTGCCAAATAGCC 92237 37 100.0 36 ..................................... CGAATCCGAATACGGGGGCATATGCTGCCTATTGTC 92164 37 100.0 34 ..................................... TTTCTATAGTCCGCAGCGGAGCCGAAATTCGGTC 92093 37 100.0 36 ..................................... AATGTCTACATATACCTGTCCTGACTCGCCAATGAC 92020 37 100.0 35 ..................................... ATCGATCACGGCCATATGGGGGTTCAGGCCGTCAA 91948 37 100.0 35 ..................................... AGCACAAAATAATCATTTTCATAAACCTCGTGGGC 91876 37 100.0 35 ..................................... TCTGCGCTGCCATTAACGGCTACCTGGAGGGCCTA 91804 37 100.0 34 ..................................... AACCACTAAGTAAGCTTTGCCATCCAACAGAATC 91733 37 100.0 36 ..................................... CCTGGTCGCGCAGGAAACGCAAAACAAAAATCTCAT 91660 37 100.0 35 ..................................... CACAAGGGCCTTGATAGCGACATCAGCGCTAATAC 91588 37 100.0 35 ..................................... CTTTTGTGTCTCTTCCAAGGGCACAGGATAAATCA 91516 37 100.0 35 ..................................... CGTTTAAGCCCCATCTCTGCCGCTTTGTTGTGCAC 91444 37 100.0 35 ..................................... CTGCGAAGTGCCGGAGGGGTTTACTTTGACCAGCC 91372 37 100.0 35 ..................................... CTAACATCAGCCATGGCAGACTCAAAATCCATAGC 91300 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 24 37 100.0 35 GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Left flank : CGGTAAATATATCGCTTTTCTTAAGTGGTGTAGATAACATGTATATTTTAATTACTTATGATGTTTCTACAGAAACAGAGGCAGGTAAAAAACGCCTGCGTAAAGTTGCCCAGGTATGTAAAGATTTTGGTCAGAGGGTGCAAAAGTCCGTCTTTGAGTGTTCGGTCAACGAAGCCCAGTTTGAACAGTTAAAGCACCGGCTCTTGCAGTGTATCGATGAAAAAAGCGATAGCCTGCGGATTTATCGACTGCGCGAACCCGCGAAAAAATACATCCAGGAGTATGGCGTCAACCTTACGATTGATTTTGACGCCCCCCTGGTTTTGTAAACCCGCGAACATATAGCAAGGGGCAAAAGGCCGAAAGGTTCGCGTTCTTTGGCGAATCAAGACCTGAAGCTAATTTTAGAGGTGAAGCATAATGAAGTATTCTAATTTAGTCATCAGGTTCGCGCAGAGTAGTAATATAGGGGTTGTCCGCCAAGGGTTTTAGCGCGAAGT # Right flank : AGGACGGCATCAACGGCGTAGCTTGGGTAGATGAGTTATGCCCGGCTATTACGCCCAGCTTACATTGATCGCAATGCTCTCCTGCTCCACCCATTTGCGGTGCTTCAGCATGGCCTGCAGGAGGGGGTGCCAGGGGGCGTAAGCCGGGTCCTCAGCCAAGTGCCGGAGCCTGGCGGCATACTCGTCGCCGAAGGGTATTCCGGCCGGCAAATACCTGGTATAAGTAGTGACATCCATAAGGTAGGGCTGCAAATCGGGAATTAAGTTGCGGCGGATATATTCGCAAATGCGGATGCCGCCGTAGTCCATATCGCCCCAGTGGTAGACCGGGGGCCTGGCGGTGGCTCCAGGGGATTCCCGGTAATCCTGGAGCCGGCGTAAAAAAAGCTGCACGCCGCGGTGGGGGAAGCCGCCGGTATATACTACTAAGCCAGCAGGGCCCTCAACCGCTAAACCCCGGCCCCCTCCCCCTTCCCGGCAAGGTACAGCCAGCTCACTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.30,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 379178-382132 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDDB01000002.1 Moorella thermoacetica strain DSM 6867 MOCA_contig000002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 379178 29 100.0 36 ............................. CTGCGGTAAAAGTAGTACTATAATCAACAGCAGATT 379243 29 100.0 35 ............................. ATAATCTACAATTATTCCTTCCTTTTCGGCCAGCC 379307 29 100.0 36 ............................. GGGAGATTTTCAAAGTCTCGACGTTATGCTCTACGT 379372 29 100.0 35 ............................. AAACTCCACCGTCCCCTCCTGCGGGTCTAGCACCC 379436 29 100.0 36 ............................. TTTGCCCTTGCGCCCTTGAGTTTTCTGCCCGTCGAA 379501 29 100.0 37 ............................. TTTAAGCTTATCAACAGCCCCGCAGGCAATGGCGACC 379567 29 100.0 37 ............................. TACTTACCCGAAGGTCATTGGCCGCGGTGGTATCAGG 379633 29 100.0 36 ............................. TCGACCGCCTGAAGTCAATTCTCTACGCCAGTAGCG 379698 29 100.0 36 ............................. CCCGCTCTCCCGAAACCCTGACCATCCCCACGGCAG 379763 29 100.0 36 ............................. TCGGAGATTGCTGTATTTGTAAATGGGGCAAAAGAG 379828 29 100.0 34 ............................. GGGTCGTCTTTACCGGTCCGTTAGCCTGCTCCGG 379891 29 100.0 37 ............................. AGCTTTTCAATGGATGGATTGCATCGACCGTGTTCAA 379957 29 100.0 35 ............................. TTCTTTTATAGCGGATATTGAAGCTGGACGTAGCA 380021 29 100.0 36 ............................. TAGCGATGACGGAATAGCCCCGTAAACCGTCGAAGC 380086 29 100.0 35 ............................. CCCGATAACGCGGAATGAGTGCCGCGAGTGTGCCA 380150 29 100.0 34 ............................. TGTTAAGGGGCACAAAGTGTTTGTCCCCTTCCGG 380213 29 100.0 37 ............................. GGTTTATAAGCATAAGTTTCCGTGCCGTGGGCCGAAG 380279 29 100.0 36 ............................. AATGGATCGTCTGGCATGGTGAAGAAGAGTACGGCA 380344 29 100.0 37 ............................. TGCGGCATATCAAGCAAAAGAAGTCGATTTACGAAGA 380410 29 100.0 37 ............................. AAGAAACCGGCGACAAATAAGCCGGTTTTCTTTTTGC 380476 29 100.0 35 ............................. TATAAACATCAATTAAATCCGCATCAAGCATTTTA 380540 29 100.0 37 ............................. TCCGGCTCGGAGCCAGGTGGTTTCTTCCGTGACAGGG 380606 29 100.0 35 ............................. TCCTTTTACTGATGACCCTGAAGGCAATATGAAGA 380670 29 100.0 35 ............................. TTACTCACCGAGGTTTCCAGTCGGGGCGACAACCG 380734 29 100.0 36 ............................. TTACGGGGCGTAGGCGGAGAGCCGAAATTCATAAAG 380799 29 100.0 36 ............................. CAAGCTCTCGGAGCTCTTCTCTCAACATTCCCACCC 380864 29 100.0 36 ............................. CTACCAGATCGCTTGAATTCGGAGAAGGTCTTTATT 380929 29 100.0 37 ............................. CTTTTCGTCCAGGTGGTCCAGGCGGCAGGCGTCTTCG 380995 29 100.0 38 ............................. TTCGGGCAGGGAATAAAATATTTCTGCCGGCAAATCTC 381062 29 100.0 35 ............................. CGCTCATGTAGAGGTACTTTTCAAACCCGTTGAGT 381126 29 100.0 35 ............................. CGTCCCAAGCCGCTCCATACGCCACCGGGGTACCC 381190 29 100.0 37 ............................. TACATTGAGCCACCCAGGCATCACGTTCCCTGGGTGA 381256 29 100.0 36 ............................. TCATAACAGTAACCTTCCCTGTAGAGGAATTAAACT 381321 29 100.0 37 ............................. CTTTTCGTCCAGGTGGTCCAGGCGGCAGGCGTCTTCG 381387 29 100.0 38 ............................. TTCGGGCAGGGAATAAAATATTTCTGCCGGCAAATCTC 381454 29 100.0 35 ............................. CGCTCATGTAGAGGTACTTTTCAAACCCGTTGAGT 381518 29 100.0 35 ............................. CGTCCCAAGCCGCTCCATACGCCACCGGGGTACCC 381582 29 100.0 37 ............................. TACATTGAGCCACCCAGGCATCACGTTCCCTGGGTGA 381648 29 100.0 36 ............................. TCATAACAGTAACCTTCCCTGTAGAGGAATTAAACT 381713 29 100.0 36 ............................. CTGGCTCACCGTAATGCGGTATTTGGGTAACTGCAC 381778 29 100.0 36 ............................. TTAGATATAATAGGTTAAAAAGCACTGGAATATTAG 381843 29 100.0 35 ............................. TTTTAATCCCGCCTCTTTCAGTTTTACGGCCATTT 381907 29 100.0 36 ............................. CTGAAGCAATCCCAGGTCCTCATCGGCAAAAACTGG 381972 29 96.6 37 ........T.................... TACCGGGGGCCTTGCTGCGCATAAAAGTCCAACTACG 382038 29 100.0 37 ............................. GGCAGTTGATCAAAACTATCCACGGCCACCTGGCAGA 382104 29 96.6 0 ....T........................ | ========== ====== ====== ====== ============================= ====================================== ================== 46 29 99.9 36 GTGACCATCGACCATAGAGGAATTTGAAC # Left flank : CTGGAAAAGACGATTTTGCACCGCAAGCTAAAAAGGAATATTCGCTATAAAAGTCTTGTCCGGTTAGACTTATATAAGCTTATAAAGCACCTCCTTGGTGAAGAAAAATATTCCCCCATGAAGGTGTGGTGGTAAATATAAGAGTGATCCTGATCTATGATATTAATACTGAAGACAACGACGGCAAACGGCGCCTGGTAAAGATCATGAAGACCAGCCGTAAATATTTATCTCATGTGCAAAAATCCGTTTTTGAAGGAGATATTACCGAAGGGCAAATATCCTTACTTAAGAAGGAAATAATGGCCATAGTTAACATGAAAAAAGACTTTGTCATCATTTATAGCCTCAGGGATGGAGTAAAGCTAAACCGTGAAATCTTGACTGACACCCCCGACCCTACAGATAATTTCCTGTAGTGTAAGTGCAAACTGGCGGTTTGACGCAGGGGCTTTTAAAAAATTGCTAAAATCCCTGTCGGGACAAGCCTTTCATCTGCG # Right flank : CAGGGTGGAGATAAAAATCTGGTGATAACGTCAAAGGTGGAGTAGTAATCGGGCTGGGTACCCGGTTGCAAGTTTTTCAGCAAGAAATGGTGCGACGTATAACTGGTGATAGCGATATAGACTTAACGTTACCAGGTAAGGGAAAGTGTGCTTACTTCATCATCACTCCAGATACCCATGGCGCCTTTGATTTTCTGGCTTCATTGCTGTTCACCTTTTTATTCGTTCGGTTGGTAGAGGTTGCTGATACCTCTCCCAATGGCCGTTTACCGGTGCAGGTTAGTTTTCTTCTGGATGAGTTCGCCAATATCGTAAGTATTCCGGAGTTTGAAAAGAAAATCGCCACCGTCCAGAGCCTAAGACTGAAGACGAACTTAACGATGGCGGAAATCAGGATTACCATGATACTAAGGACCAGAAACCTCTAGAAGAAGGGGCAGAAGAGGTGACGGAAGAAAATATAAAAGAGGGAGATAGGGTTATAGAGATAGAAAACAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCATCGACCATAGAGGAATTTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //