Array 1 2-632 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUFF01000013.1 Arenimonas composti TR7-09 = DSM 18010 K311DRAFT_scaffold00012.12_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2 29 100.0 32 ............................. AACGGTGGTCATGTCGTCTCTCCGGGATCAGG 63 29 96.6 32 ..........................T.. TGGTGGTAGCGGCGCACGCACCAGGCGCGGCC 124 29 93.1 32 ....C.....................T.. AATGGCGGCAGCGGCCAGCCGAACTCCGGCAT 185 29 96.6 32 .................T........... TGGAACGAGCAGCTCGCCACCTGGCACGACTT 246 29 100.0 32 ............................. GCCGCCGGCAGGATTCGGGTCACCATGCGGAG 307 29 89.7 32 ......G..........A.A......... GTCTGGCTCGTGCCGATCGCGATCGTCGTCGG 368 29 75.9 24 .....................TCCGG.AA GGACTTCACGATGCACACGCAGGG Deletion [421] 421 29 89.7 32 ............G...T....G....... CCTCGCGCCGGCGCCTCCACCAGGTCGCGCAG 482 29 89.7 32 ...........TG....T........... GTCGTTAGCGTCGTCCACGTCCACCGCTTCCG 543 29 89.7 33 ...G........G......A......... TGCGCAGCGATGTCGGCGATGCTGCGGCCGTTC 605 28 82.8 0 ......T......C.....C.-C...... | ========== ====== ====== ====== ============================= ================================= ================== 11 29 91.3 31 GTGTTCCCCGCGAGCGCGGGGATGATCCG # Left flank : GG # Right flank : GCCCCCGAAGCAGCGGACGAACGCCAGGTAGCAATGATTCATGTGAGTGCGCACGTGACTCGGCTGCCTCGGCTCTCGGAGCGCAGTGGCTGGTTTCCCGACGCGAACGGATTGGCTTTCACGTTCACCGCGTGCAGTCCATCGTGTTCACGTTTCTACGCCACAGCTGGCAGCGAGTTGCGATCTCCTCCGTCTGCTGCTGAGCTTTATCGACTACGCCGGCGATCGACTGTCGGCGGTGCAAGGAACGCGCGATATGCTGCGCTTTTGCTGCTCGAGTGCGACCAGGTCACCGCCGGGGAGCCGGTGGACAACGATGAACGACCAAGGGTTGATACTGGTTCCGGTCGTTGACGATGCGTCTCCCAGACCGAGGTGGACCAATGGCGAAACGGAAATCCCGCGACCCGATCACCTTCACCGCCGTGCTGCGACGCCCGGCCGAACCCGAACACGCCGACTGGGCATTCCTGCGCCTGCCCGCCGCGGCCAGCGAGGCG # Questionable array : NO Score: 5.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGCGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 548226-548987 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUFF01000002.1 Arenimonas composti TR7-09 = DSM 18010 K311DRAFT_scaffold00002.2_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 548226 29 100.0 33 ............................. CTCGCGATGGACATGCTGCGCGACATCCGCGAC 548288 29 100.0 32 ............................. GACGACGACACGGACGGGATGGCGTGACGACC 548349 29 100.0 32 ............................. GCCGCGGCGTGGAACCGCGCGTTCGGACGATT 548410 29 100.0 32 ............................. AAAGAGGAGGCCGAAAAGGCAGCGAAGAAGGC 548471 29 100.0 32 ............................. CTCGACCCGACGCTGGAGTTCCAGCGCGTCGG 548532 29 100.0 32 ............................. GTGCACACCTTCGTCACCCAGACCATCGGCGA 548593 29 100.0 32 ............................. CCGGTCGGGCCGCTGGTGATCGGCTTCGACCC 548654 29 100.0 32 ............................. ACGAAGTTCGCCACCTCGCCTTCGTTCTGGCG 548715 29 100.0 32 ............................. ATCGGCCCCACGCCAACCGGGTATTTCGTACT 548776 29 100.0 32 ............................. CGTCCGCCTGGAGCGCGTCGTCGTCCGGGATC 548837 29 100.0 32 ............................. CCGATCGTGGATGTAGGCCTGCGCCCGGTTGA 548898 29 100.0 32 ............................. GCTGGAGCCTCGCCATTCGGCCAGACCCGCGA 548959 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 13 29 100.0 32 GTGTTCCCCGCGAGCGCGGGGATGATCCG # Left flank : GGCGGATCATCCCGGCGATCGAAGACGTGCTCTCCGCCGGAGGTATCGACCCGCCGGAAGCGCCACCGGAATCCGTGCCACCGGCGATTCCCAATCCGGAGGCGATCGGGGAGGGCGGCCACCGGGTGCAGGGATGACGTTCCTGGTCGTCGTCACCGAGAACGTTCCACCCCGCCTGCGTGGCCGGCTGGCGCTTTGGCTGCTCGAGATCCGCGCCGGGGTCTACATCGGTGACGTCTCGAGGCGCACGCGCGAAATGATCTGGCAGCAGGTGTCTGAAGGCTGCGAGGAAGGCAATGCCGTCATGGCCTGGGCGAGTACCCACGAATCCGGTTACGAGTTCCAGACCGTAGGTCGCAACCGGCGCGTCCCGGTCGACTTCGATGGGCTCCGCCTGGTCGCATTCCAGCCGCCCGACGACGGCGCTCTTTGACAACCTGTGATTCGGTAGAATTTCCGGTGCGCGGTTTTACGCGTTGGAACAATGGTTTGCGTGAAGT # Right flank : GGCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGCGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //