Array 1 363-64 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLRY01000063.1 Candidatus Hakubanella thermoalkaliphilus strain S33 HKBW3S33_000000000063, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 362 32 100.0 34 ................................ CTAGGGGAATCGCTAGTAATCGTCACCCATTGAG 296 32 100.0 36 ................................ GAGATATAAGCGAAGAATGAGGTTCAAGGATAGCCC 228 32 100.0 35 ................................ ATTAGACCCCAAAAGAAAGAGTGACCCTCGCGGGC 161 32 100.0 34 ................................ TACTCGTCGCGTCTGCGTACTGGACAATCATCGG 95 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 5 32 100.0 35 GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Left flank : CCGTTTTTATGGCGATGAGGCTGGCTAAAAAAGCACTTTAACAACAGAATGGGTGTATGTGGGGGAGAAATGTTGGTTCTAATAACCTATGATGTGAGAACAGATAGCGGAGAAGGGCAGAGAAGACTGCGCAAAGTGGCCAAGGTTTGTGAGAACTATGGTCAACGGGTGCAGAAGTCCGTCTTTGAATGCCTGGTAGACCCAAAGCAATGGGTAAGGATAAGAAACAAGTTAATAGAGGAGGTCAAGACGGATGAAGATAGCTTGCGCTTTTACTTTCTGGGCAAGAACTGGAAGCTCAGGGTAGAACATGTTGGCGTCAAAACCGCCTATGACCCTGAGGGACCGCTAATTGCTTAACAGGGCTGTCTGCGTACTTCAAGTAAACATTGTTTACGAAGGGGGTTGGCGAGCTTCAAAGCAGCGTTTTCTCTGGTTTTTTTTCGGCAGACAGCACCAGGGAACTGGCTATTTTGAATACAATTTGTGTCAATAATGCG # Right flank : CATAGCTTGACTAGCCTGGATTCCCATGTTAGTTTTTTAACCTAACACCATGGAGCATTATCCG # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 1 10823-9070 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLRY01000030.1 Candidatus Hakubanella thermoalkaliphilus strain S33 HKBW3S33_000000000030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 10822 37 100.0 37 ..................................... AGTACTTGCCAGTCACATTAGCGTTAACATTTATAAC 10748 37 100.0 40 ..................................... CTTTGAGCAAGGAGAGGCGCACAATATCCCCGCTTACGTC 10671 37 100.0 35 ..................................... TATTCTTAAAGCCTATGGCGCAGTGAGATAAAAAT 10599 37 100.0 38 ..................................... GCGCACTTACGGCAGGTAATCCTTGTCTCGTTTCTTTC 10524 37 100.0 39 ..................................... GAGCGCAGCTCCTCGCCCCAGCCCTCAACTACCTTAAAG 10448 37 100.0 38 ..................................... GATAGTTTCTTCCTCCAGCCCCGATAAGGGTAAATTTT 10373 37 100.0 39 ..................................... AATACTACGCCGGCAGGCGTTTGAAACACCTGATCGCCC 10297 37 100.0 36 ..................................... GATAATTGAGTTTATCCTTCAGGTAAAATATTCCCA 10224 37 100.0 36 ..................................... TGGTGACAGATTTTGTCACGGTAACCTATCTATATC 10151 37 100.0 37 ..................................... AGTACTTGCCAGTCACATTAGCGTTAACATTTATAAC 10077 37 100.0 40 ..................................... CTTTGAGCAAGGAGAGGCGCACAATATCCCCGCTTACGTC 10000 37 100.0 37 ..................................... CGGCCCCATTTTTTCATTCGGAAAAATGCTCTGGCGA 9926 37 100.0 42 ..................................... GGGACTATCCTGGTACTGCAGGCTCTTCAGGCTCTTAAAGAC 9847 37 100.0 37 ..................................... ACCCTCGCCCCACAACGGAGACAGACCCTGGTATCAC 9773 37 100.0 38 ..................................... ACCTAAAATTTTTCTCCGTTCCTCAGGGTTAACCGACT 9698 37 100.0 39 ..................................... GGCGATGATCTGTCCTTTTTTAACTTCGGTTCCTTCTTC 9622 37 100.0 37 ..................................... GCTTGTTGCGGGCACCTTCTTCGAGCTTGGCGACGAC 9548 37 94.6 37 ....C.........T...................... ATGCCATGGCAAATTAAGTGGTCATCCTTCATATCCT 9474 37 97.3 36 ....C................................ GCCACCCTCTTTTTCAAAGAGAGATACATCCCACGA 9401 37 100.0 36 ..................................... CATGCGCAGAGGGGCCACCCCTTCAATGGTTATCTC 9328 37 100.0 38 ..................................... TCTTTTTTGAGTTCTCGGAGGACCCTTTGCAGTTCCGA 9253 37 100.0 36 ..................................... CTGACTTTCTCTTGGTGTTGTAATTCTCCACATTAG 9180 37 97.3 37 G.................................... CTACCTGATAACTTTTCTTCCCTCTCTTTTTCGAAAC 9106 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 24 37 99.5 38 ATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAAC # Left flank : TAAGAGGGATTGAAACGGGTCAGAGCTGAAGCATGGCCACTATTGACCATCTATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACTAGGCCCGAAAGTTCTCTCGATCTTCGGAGTCAAACCATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACGTACGCCCACCGCGCCCCCTTGGGTCAGAAACCTCATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACTGAATATCTTGATTTCAGACTTACTTTCTCTCTCCAAATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACTGGTGACAGATTTTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACTGGTGACAGATTTTGTCACGGTAACCTATCTATATC # Right flank : TTATTCTGCTTTTCTTGCAGGACAAGATCTTTCAGCAAAAATAGCCCTCTGGAAAGATGCCGAAATTTATAAGAAAGAGGCAAAGAGTTGAAATAGTCAATTGGGTGCCAGGACATGAATGATAGTAAATATCACAAAAACCTACAGAGGTTACCAAAATTTTGAGCGTGCTCAGTGAGGAGACGTTGACATGTTGGGAAGTTTTGTGGTCCGGGTGCGGCCGATGAAAAGTGTCTGTTATCAGTATTGCACAGGTAGACTTCTGCATGGTCTTTTTCTGCATCTTATGGAGAGAGTAAATCCCTCTCTGGCTGGGGAACTTCACGATACCAAAGGGCAGAAACCATTTACCGTCTCTCCTCTCTTTGGACATTTCCTGACCGACTCAGGGGCAAAAAAGGCGCTAGAGGAAGAGGAGTATTGGTTCCGATTCACGGCACTTACCGAAGAGTGTTGTGAGGCATTGGTGAGGGTTTTCTATGGAGAGGCTATTCCCAATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 11417-11014 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLRY01000030.1 Candidatus Hakubanella thermoalkaliphilus strain S33 HKBW3S33_000000000030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 11416 37 100.0 36 ..................................... GGAATTTGCATCGCTGGACTTGTAGTTGGCTGTCCC 11343 37 100.0 36 ..................................... GGGTCAGAGCTGAAGCATGGCCACTATTGACCATCT 11270 37 100.0 37 ..................................... TAGGCCCGAAAGTTCTCTCGATCTTCGGAGTCAAACC 11196 37 100.0 35 ..................................... GTACGCCCACCGCGCCCCCTTGGGTCAGAAACCTC 11124 37 100.0 37 ..................................... TGAATATCTTGATTTCAGACTTACTTTCTCTCTCCAA 11050 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 100.0 36 ATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAAC # Left flank : GAAAAAGAGCTCGAGTCTTTATTAACGTTGAGGTGACCAGGGATATAGGATGAGGCAAGAATCTTGATATTAGAAAGGAAGGTAGTAAATTAAAGATGCCAGAACTAACCAAAGGTGCAAAGGAGGTTAATGAGAATTTGACGGTTGGCTTTGGTTGGTTGGAATAGAAAGAATAAAGGCTCTTCTCCAAAAATAGTGGGTAAGAACCAGAATAGATGCGGACAACAATCTGGAGTTCCTTTGACACATAAAAGAATATATGCAAACTTTCTGAATTTTATCTGTATATTTCTCGTCGCCTTGCGGGCTTCTTGCCAATTTACAAAACACCTGGTCAACGCGGTAGATGCCCGCAGGATCATAATGCCTGATAGGAGGACATTTGGCAGTACAGAGAGGGGCAAAAACCCGATGTTGTGCTACATAAGTTACAATATTTCAGGCACATGCCCGAAAATAATGAATAAAAACCTGTTCAAAGCCTATTATATTGGGCTGCT # Right flank : TGGTGACAGATTTTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACTGGTGACAGATTTTGTCACGGTAACCTATCTATATCATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACAGTACTTGCCAGTCACATTAGCGTTAACATTTATAACATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACCTTTGAGCAAGGAGAGGCGCACAATATCCCCGCTTACGTCATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACTATTCTTAAAGCCTATGGCGCAGTGAGATAAAAATATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAACGCGCACTTACGGCAGGTAATCCTTGTCTCGTTTCTTTCATGAGAAAGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGAGAAAGGAGACCGATACCTAAGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [16.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA //