Array 1 566629-564298 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011531.1 Phocaeicola dorei CL03T12C01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 566628 33 100.0 32 ................................. TCAAACAGGCGTTTGGACTGGAAAAGACAAAT 566563 33 97.0 32 ................................A ATAAAGACATCTCTACTATACTATTGCAGATT 566498 33 100.0 33 ................................. ATGTATAGACTTATTGAGGTAAACCAGCACGAC 566432 33 97.0 34 ................................C GGCAAATATATGCAAATATTCGCCCCGTCTGATG 566365 33 97.0 34 ................................C TGAATGCTGAGGTTGGTGCGGATGAAATCCATAG 566298 33 97.0 33 ................................A CCAGCCTGTTAAAGTTCGCATCAACTGAAGGTA 566232 33 97.0 33 ................................C GGATGGGACTTACGCCATCTTTCCCAGACCCGT 566166 33 100.0 32 ................................. TGACCGTTATTCGGATATCGGAAGTTTTGCCG 566101 33 97.0 32 ................................A AAGTATCTGAAATCTGTCGAAAAGAAAGCATC 566036 33 97.0 33 ................................G TATAGTTTTTGCTGAGCCTTAGCGGTATTATAC 565970 33 100.0 33 ................................. GAATACTTTAGTGTTCTCGGGATCCTGCAAGGT 565904 33 100.0 32 ................................. TGGAGAGAAACAGCTCCGGGGAATTACCGGTA 565839 33 100.0 31 ................................. CCACCATGAACCTGTGAAGGCCTGACTAGTA 565775 33 97.0 33 ................................A TGCTAAGCCTGCTGAGAAATGGGGAATATACCC 565709 33 97.0 32 ................................C GCCCGTTTGTCCAGATAGGCTTTGATTGCCTG 565644 33 97.0 32 ................................A TACTCTATACCTGTTTTGAGGATAAACATAAT 565579 33 97.0 34 ................................G CTGACTGATAAGACCAAGATCCAGAAGAAGTGAG 565512 33 100.0 33 ................................. TTCGAGTTAGTGAATAATAAGATATGATAATGC 565446 33 97.0 33 ................................A ATGTGATATGACTCAGATACTTTTAAACCAAGA 565380 33 100.0 32 ................................. CACGGTTAATATCGATATTAGTCTGATTAACC 565315 33 97.0 32 ................................C GTGTTGCTACCTTCTGCCGCGATATGATTAAG 565250 33 97.0 31 ................................G TACATAGTCCGCTTTCTTTTCATACTCTATA 565186 33 97.0 33 ................................C CCCAACCTGCATTCGACCAGTTGGGTATGCAGG 565120 33 97.0 33 ................................G TATAGTTTTTGCTGAGCCTTAGCGGTATTATAC 565054 33 97.0 34 ................................A ATTAAAGAAGAAAATAATTTTATCGAACTTAAAA 564987 33 97.0 33 ................................G TATATCCCGGTATCCGAGTATAGTTGCTCAGAT 564921 33 100.0 32 ................................. TTGGATGGTCTTGGAAATTATTCTGAGCGAGT 564856 33 100.0 33 ................................. TCTGTTGGCCGTAATGTTGTTTTGAATTCCGAT 564790 33 97.0 32 ................................C TTTATGTCAGTAAGTTCTTTAGGAATTGGCAT 564725 33 100.0 33 ................................. TACCTCTTCTGGTACTTGGTCTTATCAGTCAAT 564659 33 97.0 32 ................................G TACGTTGCGAGTTACGTTAATAGCCTTAGTTC 564594 33 97.0 32 ................................C TTAGGAATTGGCATTTGCCTCCCATCGGTGGC 564529 33 100.0 33 ................................. CAACACCTGATAGGCGAAGCTATTGATATCAAG 564463 33 97.0 33 ................................A TTGATATTGATAACATTAGACCAACCTCCAATA 564397 33 100.0 32 ................................. TTGATTACTTGTTTTACTTCTGCTTCCATAAA 564332 33 81.8 0 ..........G.......A.A.......G.G.A | AA [564314] ========== ====== ====== ====== ================================= ================================== ================== 36 33 97.7 33 GTCACACCCTACGTGGGTGTGTGGATTGAAACT # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCATGTTTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTTTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTAGAAGTAATAGGTGTTGAAACGGCTTATAAAGTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAACTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTCGGTCAAGTTTATGGAAGAACTGTAAGCATTCGGCCTCTTATGTATTTCTCTCCAGGCTTTTGATTTTGTTATGACTGGAAAAAACACGTACAAGCCCGAATGCTTATCTTTTGTCTGTTTTCTTTTGTTGTTTCACCTAGGTGACAATACATTGGCACCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGATTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTGCACGATAAGGCCTTGTAAATGAAGTAAATGGATGAACCATCATGTAGGACACATCAAGAAGGAAAATCTATGAGCCTTCAGAAACAATGGTAAAAATCCACATACATACCAGTTAAGGGGAATTACGGATCCTTTTACACCACAAACCGTTGAAAATAAATGGTTTGTGGTGATAGAAACAAAAAAAGAACAGATGTCTTTTTAATACGCTATCTTATCCAATATCCCGTTCAAGTGTGCAATAGCCACTCC # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTACGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //