Array 1 2306049-2303637 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064314.1 Lacticaseibacillus paracasei subsp. tolerans strain MGB0747 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2306048 36 100.0 30 .................................... TCTTACCCTTGTCGCCATGAGTAGCGCCAA 2305982 36 100.0 30 .................................... GTCTGTCGCTTAAGGATCAGCAAGCAATTG 2305916 36 100.0 30 .................................... AAGAAAAACGTGACTTATACGAGGCTGCGT 2305850 36 100.0 30 .................................... CAATCAAGAACTTTTGGAACGGCTGAAGTT 2305784 36 100.0 30 .................................... ATTCCGATCAGGCTGTGAAGTCAGTCAGTG 2305718 36 100.0 30 .................................... CAGTAGCAACATAAACCCTAGTACCAATAA 2305652 36 100.0 30 .................................... CAACCTTACAGAAGTTCTTCAAGAGCGGTT 2305586 36 100.0 30 .................................... GGACGAGCAAATCTAACCGCTTCGGGCCAA 2305520 36 100.0 30 .................................... CCGAAGGATAAGCCAATATTTGTACCAGAC 2305454 36 100.0 30 .................................... GACTTCGAATGCTGAAGAACTAGCTGATCA 2305388 36 100.0 30 .................................... GGGGCACCTCGATATACGGGTACCCCATCT 2305322 36 100.0 30 .................................... CGAATTTAAGACGATGAAACTGCCGTATGG 2305256 36 100.0 30 .................................... AGAGTTTATTCAGCATGATAGTACCAAATT 2305190 36 100.0 30 .................................... TCAAATAGCCTCTTCGAAAGTTAAAGGAGG 2305124 36 100.0 30 .................................... AGCGTGGCGTAGCGCTAACTTGTCATTTTT 2305058 36 100.0 30 .................................... TATTTCGCACTTCCAAAATCATAGCCATCA 2304992 36 100.0 30 .................................... CGCCTGAACATTGCATCGATGGTTTGATCA 2304926 36 100.0 30 .................................... GTTGGTGGCAGCGATTCATTGCTGACGTCC 2304860 36 100.0 30 .................................... AACAATTGAAGCGGTGGAAGCTATAGCCGC 2304794 36 100.0 30 .................................... TCGACAATTGTGACACGGGTTTCAACGTCA 2304728 36 100.0 30 .................................... AACGGTGCTGCCAACTGGGTGCTCGCGCGC 2304662 36 100.0 30 .................................... CTAACCACTGGACTGGCTGGAGGGGTCGCC 2304596 36 100.0 30 .................................... CATCGTACCCTCACAAAAGCTAACGCCGGC 2304530 36 100.0 30 .................................... CTTTTATGAAGAACTGTTTACACCGGTTAT 2304464 36 100.0 30 .................................... TCTTCAAGGTCTTGTGTGGCAATAGCGTTT 2304398 36 100.0 30 .................................... TCAATATAACTCGCATCATAATCAAGATTA 2304332 36 100.0 30 .................................... GGGATTGTGGGCTGACGATAGATATACGCT 2304266 36 100.0 30 .................................... CTAACCTTGGCTGTGAATACTGGAGGCGTC 2304200 36 100.0 30 .................................... GTAAAACCATCATTCGTCTTGGAGTCAATC 2304134 36 100.0 30 .................................... CATATTGACGTTGTGAACGTTGCATTTCTG 2304068 36 100.0 30 .................................... CTTACGTCAACGGTTATACCGTGCGCAAGG 2304002 36 100.0 30 .................................... AAGGGTTAGCGCCACTTAATCCTGACAACT 2303936 36 97.2 30 ................................A... AAAGGCTTACGTTCAGGCGATTGAATCCGG 2303870 36 100.0 30 .................................... ACCCAGTTTCCTCGTTGCGCAGATGTTTGT 2303804 36 100.0 30 .................................... CCGAGAAGGTCGGACGATCAACTACTTTCG 2303738 36 100.0 30 .................................... AGGAAATTCGAGTTCTTCCCGCAATTGATG 2303672 36 83.3 0 C.............C..............G..TTC. | ========== ====== ====== ====== ==================================== ============================== ================== 37 36 99.5 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGTGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAATCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTCATTCTCATCGAGTTCTCAAAAGTGAACCGAAAGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGTGAACTAGATTGATTAGGAGATTGTGTGAAAACAACG # Right flank : AAACAGCAGTGAGACTAAACTGAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGGTGTTTCACTATTTATTGTGTGAACCAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCGTCTAAAGCAATATCGTAGTAACCACATACACTCATGCGGTGATATATCAATCAAAAACTAAGTGCTATCTAACTCCTCTTGTGATAGAATTCATTATATATGAAATCGCTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGCGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGCAGCACGACTAGCCAGACGAGCAATGCTAAGGTGAAGATTAATACCGGCGCCGATGCGAGTGCCAAGGTGCCGGCAGCCGGCACCTTAGTGATGCGTCAGCTTTATGCTGCACCACACGGCAAGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //