Array 1 73334-73059 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMFY01000017.1 Sediminivirga luteola strain CGMCC 1.12785 sequence17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 73333 29 96.6 32 ...........................G. GGAATCCGCTCCCTCCTGGGGAAGGTGGGCCA 73272 29 100.0 32 ............................. CCAACCGGGATGGCTCCAAAGATTCCGAGGTT 73211 29 100.0 32 ............................. TCGCCTTCGGTCTCATCGGTGTCCCCGCTGAG 73150 29 96.6 32 .......................A..... AGCTCAAGGCTCGACTGCCGGGCGGCGAGGAA 73089 29 96.6 0 ...........................G. | CA [73064] ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.0 32 GAAGGCTCCGCGTAGGCGGAGGTCGACCC # Left flank : CCCGTCTCGCTGAGACCTGATGGACCGCGTCGAGCTCGAGGATGCGCTGGAGGCGCTGCGAGCGAGGGGGCTTCAAGTCCGTGACGTCGGGTTGCTCGACTCGGCACTTGCTCGGCCAGTAGCTTCAGCGTTCGGGCTGCCCGCCTACGGGTCGCTTGCTCTCGCGGCGGCAGCGCAGACTGAGTCAATCGTTCGGAATCACCCGCTGTTCGACGGCAACAAGCGAACGGGCCTCTACCTTCTCGCGGTATTTCTGAGGCTGAACGGACTGCGTCTTGTCGCCGGCAACGATGAGTTGTACGAGCACATCGTTGCGGTCGCGCGCGGTGACGTAAACCTAGACCAGTCGGCCAGTTTCATCGCCGACCGAGTTGAGCCATGGCGTTGATCTGCTGGGAACGCGCGATTAAGACTTGCGCCCCGGCCGCAGACAGGTGGCGTAGTCAAACGAAGTGAATGAGAATGGGACACGCACCCGACAAAACCGCTGGTCAACAAGT # Right flank : GGTAGACCCTACTCGTCCAGCCCCAGCAGGCGGGCGCCGTTGTGCCAGAGGACGTGGCGTAGCCAGTCGTCGCCGAGGTCCAGTGCGCGGAGTACCCGCAGCTGTTCGGCGTAGGTGTGCGGGATGGTGGGGAAGTCCGTGCCCAGCACGATCTTCTTCTTCAGCGCGCCCAGCCGCCCGATGTAGTCCTCCGGAACCGGCGCGAAGTACTCGGCCAACTCGGTGAACACGATGGTCGTATCGAGGTGGACGTTCTCGTACTCCTCGGCGATGTCGGCGAAGCCGTGATACTCCGGCATCCCCATGTGCGCGATCACCAGGACCAACCGCGGGTGATCCGCGAGCACCCGTCGGATCCGCTCCGTTCCGGTATAGGTGCCCTTCAACGGCGCGGACCCCGCGTGCGCCACCACGGGGACCTGAGCTCGCTCGAGCTGATCCCACACCGGCGTCAGCCACGCATCGGCGGGGTCGTACTCACCCACCTGCACATGAGTCTT # Questionable array : NO Score: 2.88 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGGCTCCGCGTAGGCGGAGGTCGACCC # Alternate repeat : GAAGGCTCCGCGTAGGCGGAGGTCGACGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.80,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 1 44210-44421 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMFY01000021.1 Sediminivirga luteola strain CGMCC 1.12785 sequence21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 44210 29 100.0 32 ............................. ATCGGCAGGCCCGGGGACGCGTTGCCCACGTA 44271 29 100.0 32 ............................. TGGCAGCACAGGCCGCCGTCCCTCCGCCCTGC 44332 29 93.1 32 ............TC............... ACCGGCATCCGCCGGCCTGACAACAGCTCGTC 44393 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGCTCCCCGCGGACGCGGGGGTGATCCC # Left flank : GGCGTGAAAGCGGGGCAGAACCCTGGCCGCTGCTGGCGCCGGTGTTGTCTGAGCGGAGGCGCGGCCGCGCCGATGCGCGGTACTCGCTGCGCGAATCGTCGCCCGGTGGCTGGGTCACACCGTCCTCCATGATCGTGGGAATGCGCACGTCGAGCAGACCGGTTCCGCTGGTGGCCGACTGCTGCGGCTCCGATGGCTTCCCCGCGGCTCGCTCACGCCGGGCGCACTTTTCTCCGGGTCATTCTACGTGTGCCTATGTGACCGGATGCTGGTGGCCCGCTGCGCTCTCCCTGGGCGTGTCGAAGGCCTTCTGTACGGGCCTGTCTTCGTGATGGGGGTGCAATGGTGGATCGCATGCTTGGAATAGCGGGTCCTGCTGGCGTCTTGTCGGTCTTTTGCCGGTTCTTCGCCGGGTGTTCACTGGCCCCCGGGATCGGCTGGTGCCGTCGAAACCGATGCTAAACCGAGGTACCGTAGAAAGAAGTCCCTGGTCAGGAAGT # Right flank : CGACATCTCCGACTGCACAGCCTGAGATCCCTGCCCCGCCACACCAGCTGATCGAATGCCACGATTGTATCACTATACGCTACAATCGTGGCTATGACAGCGAAAGTGATTGCGGTGATAGCCCCGCTCGCGGAACAGCATTGGGGCATGTTCACCACCGCCCAGGCAGCGTCCGTGGGCGTAGAGCGAATGCAGCTCTCGCGTCTGGCATCGGCAGGAGCGATCGAGCGGATGGCCAAAGGGATCTACCGAATGGCAGGAGCCCCTTCAGACAGTCGAGACGATCTCCGTGTCGCGTGGCTGGCGCTGGGCGGTCTGGACCGAACGGCCGACGGCGTCTCCGCCGCAGTAGCGATGGAGGAGACCGCAGCTGAGCTACACGAGATTGGCGATCTCTACACCGGCGGATTCCGCTTTGCCGTCCCTGAGCGGCGCCGCACCCGGCTTCCGGAGACCCTGACGAAGGTGCGGAAGCTGACTCGCGAGCAGGTGACGTTCAT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGGACGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1195-311 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMFY01000025.1 Sediminivirga luteola strain CGMCC 1.12785 sequence25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1194 29 96.6 32 .......................G..... AGGCCCGCCAGCGTCTCTACCGCGCCTGCCTC 1133 29 100.0 32 ............................. GGCTCGCTACCGCGCCAGAGCAGGTAGCGGCC 1072 29 96.6 32 ................T............ CGGTTCTTCACTGGCCCCGCCTGCTGGGAGGG 1011 29 100.0 32 ............................. TGGCCCGATTCAATGCCCTCCGGGTCGAGATC 950 29 100.0 32 ............................. ATCAAGTTCACCCACGAGGTCACACGGCTGCA 889 29 100.0 33 ............................. AGCGCCCACAGGCCCAGCAGCAGCCACACGCCA 827 29 100.0 32 ............................. GGTGCTGTGGACCGTGACGACCTGCCCTGACT 766 29 96.6 32 .......................G..... AGCCGCTGCCGACCCCGGTGAATCCGGACGCT 705 29 96.6 32 .......................G..... GGGGAGTCGCGGAGCGCGACCATCACGACCGA 644 29 96.6 32 .......................G..... GTGCTCGTACACGTACCGGTGGGGGCGTACTG 583 29 93.1 31 .......................G....T CCGGGGGGATCGGCCACCGGTGGGTCAAAGC 523 29 96.6 32 .......................G..... GAGTCCGATCTGGTCCGCCTCAAAGCCGTCCG 462 29 89.7 32 .....G....T............G..... CGACCGGTAGATCCGCATGGTGGATGGCAGCC 401 29 100.0 33 ............................. CGGCGCACCGTCACCCGCTGGGAGGCCAGCGAA 339 29 93.1 0 ..............T.............G | ========== ====== ====== ====== ============================= ================================= ================== 15 29 97.0 32 GAAGCCGCCGCGTACGCGCGGGTCAGCCC # Left flank : CGACGTGGTGGAGCGGATGGTTGCGGCTCTGCTCGATCCGAATGCCGGTTACGAGCCGGAACCGTGTGACGGCGGTATGGATCGCGCGGTCGCCGCAGTGCCGCTTATCAACGGCGTGGGGGAGGCCGGATCCGGCCGTATGACACGGGCGGCACTCGCCCCGCTGGCGGTCCTGGGCATGGCGCGCGTGGGCCATGCTGGGGGCGGGCCGCTGGGAGTCATCGGTTCGGGCGAGGCGTCGAAGCTGCGACTGCCGCTGCCCACACGTCCCACCGGGTTTGACGAGCTCCGTGCGCTGCTGATGGCCGTATGGACATCGCCACGGTGGAACTGGGCAGCTGTAGACAGCGCGTGGGTGTTGGAGTTCCGCCGGCTGAAGAAGGGAGATTCTGACATGAGCTGGCAAGGTGGCGCCGTCCGGCGTCGAGGTTTCGTTGCCAGCCTCTCGGAAAGCGAATGAAAACGGGTACTCCGGTCGATAAAGTGCCTGGTCAAGAAGT # Right flank : GGGCTGCGTCGTCTTCGAGCCAACCACACCCCGAGGCACGCATCGGGCGGGACAGGGGGCCAGCCTCAGTTGAATCTGAAGAGTAGTTCCAGACCAAGTCTTGTCCGGAGGCCGGCGTCCACAGATTGGCTAGGGGCTCTAGCGTGACACTGCAATGAGGGGTTGACTAAACTCATGACGAAACGCCGGGACATCATCAGGCGCATTGTGGAGGCCGCGAAGGAACGAGGGGACTGCCGCACCGATAGGTGACATCTGATCTGGCTTGCCCACTGGGCGGCCTGGAAGGATGTGTACCATGCCCGCTCCCT # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGCCGCCGCGTACGCGCGGGTCAGCCC # Alternate repeat : GAAGCCGCCGCGTACGCGCGGGTGAGCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //