Array 1 187671-184848 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNHL01000004.1 Brachybacterium sp. UMB0905 ERR1203658.17957_1_70.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 187670 36 97.2 37 ..............A..................... GGGGCAGGCGCAGATCCTTGGCGAGAGTGCCGCCGCC 187597 36 97.2 34 ........................G........... CGCAGTCAGGCGACTCGTAGATGCCGCTACCGGG 187527 36 100.0 38 .................................... GCCGCACATCGCGTCCAGGGCAACCAGGATCCGAACCA 187453 36 97.2 37 ...........................A........ TGCCATCGCCATGCGGTTAGCGCTGCTCACGAAGGTG 187380 36 94.4 33 ............C..............A........ GGCAGGCTCGGTGCTTGGCTCGCGTCGGCGCGC 187311 36 97.2 34 ...........................A........ CGGACTCCGGCACCATCCATATCTCACCGATCCG 187241 36 94.4 35 .................T.........A........ CGAGGGGCGTACCGGACCCGTGCCCCGAGCTTCAC 187170 36 97.2 35 ...........................A........ TACGCCGCCGCAACCTCAGTCGCATTCATCCGCAG 187099 36 100.0 35 .................................... CCCGGCTCGAAGCGCTCCACGACGCGAGTGTTCAG 187028 36 100.0 34 .................................... CGAGGTTGTCCAGCGCCGCCTCCATCTCGCTAGG 186958 36 100.0 34 .................................... GGGAGCACGCGAACTCGCCACGCCCAGCGGGGCA 186888 36 100.0 34 .................................... CCTTCGTTTGTTCGTTCCTGCCTGACATGGACTA 186818 36 100.0 36 .................................... GTCGCTGTCGCGCTTGGTGGAGCGCCCGTAGGTCGC 186746 36 100.0 36 .................................... TGTCATCACCGCGATTGTCGCTCCCGCCCTCGGCGA 186674 36 100.0 37 .................................... TGCCGCGATCATCGCGGCGTCGCGTGACGGCGATCTT 186601 36 100.0 34 .................................... CTCAGCCGTCGCCTTCCAAAACTGTGCAGACCAG 186531 36 100.0 36 .................................... CAAACAGGACAGGGGGTGCCCATGGTCAGGGCGCTG 186459 36 100.0 34 .................................... TGGCGCGGAACATGTATCTCGACCGGGATCCCGG 186389 36 100.0 35 .................................... CTCGGAGCCCTGCCAGACGACCAGGGCGCCGGGGC 186318 36 100.0 35 .................................... CGAGCCCACTGGACGATGTCCGCGACGATCAGGAA 186247 36 100.0 37 .................................... CGCTGACCCATGTGAGCCCGCCGTCCTCATCTTCGGC 186174 36 100.0 36 .................................... GTCGCATCGAGGTCCTCGAAGCTCTCCGTCGCAGCG 186102 36 100.0 37 .................................... GTCACGATCATCCTCGCAGCCCTTGGAGGTGCGGGTG 186029 36 100.0 36 .................................... GGGCAATCACTTGCCTGCCCAGAAGGTCGGGAAGAA 185957 36 100.0 34 .................................... CCCACCCGCATCCGCAGTCATGATCCGAGCATCG 185887 36 100.0 36 .................................... GCGGAGGGTGTAGATGCGCCCTGCCTGCGTGATTCC 185815 36 100.0 35 .................................... GCGCAGCGAGGCTCGCTGACGGGTGCGCCGGTCGG 185744 36 97.2 36 ...C................................ ACGAGGAGACCCGCGCGACCCTTGCGTACATGCTGG 185672 36 100.0 36 .................................... CCAGGAGCAGGCGGGGGTGCGCCACCCGTCCGGCAG 185600 36 100.0 37 .................................... TCAGGGGAGGATGCCATGGCGGAGACCCGCACGATCC 185527 36 100.0 34 .................................... CGTGGCGCGATGAGCGCCGCCGGCTGATCTTCAC 185457 36 100.0 36 .................................... ATGTTCTCGACCACGAACTTGACGGGCTTCTTCGCG 185385 36 100.0 35 .................................... GTGACGGAGATCCGGCCTGTGGACTTCGTGATCGA 185314 36 100.0 33 .................................... TCAAGCGAGGAACTAATCATGAGCCTGCCTGAC 185245 36 100.0 36 .................................... GCAGCGCGTGAATCCTGCTGGTGAGCCGGTGTTGTC 185173 36 100.0 36 .................................... ACAGGTGTCGCGGGTCGACGTGCCGGGGTTTGGGGT 185101 36 100.0 35 .................................... CCGTTCATGTGGCTCCCGGAGGGCCTGCGCGAGAG 185030 36 100.0 38 .................................... GGGGACGCGCGGACCGCGATCGCCATGTCCTACCCCCT 184956 36 100.0 37 .................................... CCATCGGGCCCGAGTGGTACGACCAGGCGATGTGGAT 184883 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 40 36 99.3 35 GCCTCTACGAAGTCGGCCCCGAGAAGGGGCCGAGAC # Left flank : CCTGGGTGTGCGTCGACGAAGCCGGGTGTGCGGCCTCGAGCGCTGAGAACGGGGAGGCGGCGCTCGCGGTGATGCGGCTGTTCCCGCCGCAGGTGAGCGTGGGGCAGGGCGCGGCGGAGGAACAGATCCGTCGGCATTATGAGGAGTGCCGCAGCGACGGAGCCGGCGCGCTCGAGGCGCTGCATGCCACCGCGATCCACCTCGAACTCAGCCTTGAGGACTGCGCCACTGTGCTGGGCATGAGCGGAGAGGTGCGCCGGGCGGGAGGGAGTTGGAGGATCCCACCGGCGTGAGGAGCTGGGCCTCAGCGGACGGGCCAGGGCCTTGGGGCACATGCTGCGGACGCTTCGCGCACTGCCTCCACCACTTACCCCGGCGTAGTGCGGGTCTCAGGCCGCATAGCGGACTCGCACCCGCGGTACTCCGAGGTAAGTAGCGGGGGAAGCCGGGCAAGCAAGCGGGCCTAGGTGCTCCGGATCGGCGATCCGCAACCGCGTTTT # Right flank : AGCTGCCTCACCACGGCCATCCCTACCTGCATGTTCGCGGTGCGGCGCGAGGGCTGCGGGGGGCAACTGCACGACAGTTTCCACTATGCGGTTATCAAACAGCAAGTTGAGCGCTGACCTGCACAGCTGGTCCGCGAACCCTCCAGGCGTGAGGCCAGATCGACAGAGGGTTCGCACTCACACGATGATGGCGGTGTGATCGGTGATGTCTCGTTCCCTGCCCAGGAACGAGAACGTTTCGTCTGTGAGCGCTGAAACTCTGCCCACATCGCAGATGAGGATCGAGTCAGTCTCAGCATTCAACACGCCCTTCAGGGTGGCACGGAGTCTCACCATCTTGCCCGGCGATCCGTCGACCACGAACACGGAATACTGGACGCGGTCTCCGAACTCTTCCAGGGCGCGCGCCACCCGGGTGCGGCGCCGATCATCCGGAACGTCATAGGCGATCAGATACCGGTGCGCATCGGCCCTCATCGCACCCGCACTCCCACGTACTT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCTACGAAGTCGGCCCCGAGAAGGGGCCGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.70,-14.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //