Array 1 2320989-2327623 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068158.1 Corynebacterium striatum strain FDAARGOS_1115 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================ ================== 2320989 29 100.0 32 ............................. GCCTCGTCGGCTGAGATGACGGGCATTTCTCA 2321050 29 100.0 32 ............................. CACAAGTCGGCAAGCTCTTTATCTACCGCACC 2321111 29 100.0 32 ............................. CCATATTCATGGATGTGGACTTCTGGGGCAAG 2321172 29 100.0 32 ............................. GACATGCGGGAATGGTTCACCGTCTCGGTACA 2321233 29 100.0 32 ............................. ATTCCGCACCCAACGAATGCACACGAAATACC 2321294 29 100.0 32 ............................. CGATTTCTGAAAAACTACCCGATGATTTTGAG 2321355 29 100.0 32 ............................. TCGGCGACGTTCTGAACGTCGTCCTCGAGGAA 2321416 29 96.6 32 ............................T GATGTGGTCAAGGCTTAAATTGTCTGTAGTTC 2321477 29 100.0 32 ............................. CGCCCCGCGCAGTTGACCAAGCTCGCCGAGGT 2321538 29 100.0 32 ............................. GCATACATCTGCGATATGGACTTGCTCACTAA 2321599 29 96.6 32 ............................G CAGGCACAAAAGACACACACCGGCATGCACTT 2321660 29 96.6 32 ............................G TGTGTTGTCCGCCTGTTTGTATTGGCGGTGGC 2321721 29 100.0 32 ............................. TCGCGGATGAAATCCTACGGATGCGGAAAGAG 2321782 29 100.0 32 ............................. GACTCACACCGCAGTGAGGAAATGGCATTCAG 2321843 29 96.6 32 ............................T TTGCCCCACCGTGATTTTTGGAATCACCTTGA 2321904 29 100.0 32 ............................. CGCAGCCCTCCACGGCGACGATTCTGGGTAGT 2321965 29 100.0 32 ............................. CAATCACCATGCGACGGCACCCGTAAAGGCGT 2322026 29 100.0 32 ............................. GGTTCCGAGCACCCACACAATCTCCGAACGGC 2322087 29 100.0 32 ............................. TGTTGGTGGCGTAAAGGGTGACAATTGGTTCA 2322148 29 96.6 32 ............................T CCTCGACACCCTACTAGAGCAGGCCACCGGCG 2322209 29 100.0 32 ............................. CGAATACATCGCAACCGTTACCATCATTGGAC 2322270 29 100.0 32 ............................. CCTCGACGACCTCACCCTTGACCCGGCAGAAC 2322331 29 96.6 35 ............................A CGAGGCTGTGGAGTAGTCCTGTTCGACGTATGAGT 2322395 29 100.0 32 ............................. CGCCCCCACAGTCAGACCCGAATCAGACTGCA 2322456 29 100.0 32 ............................. TGATGCAATATCTCCGCACGTGTTCATCATCG 2322517 29 100.0 32 ............................. CATCATCATCAACCCTGACGATGACCGCCTGT 2322578 29 100.0 32 ............................. ACCCCGTACGCGGCCCGCCAACACGAAGAAGT 2322639 29 100.0 32 ............................. CTTCTGCGCCGCAGCGCCAGGCTCCATGTCCT 2322700 29 100.0 32 ............................. AGAAGAGTCATTCACCTCCCGTGGCGTGGTTG 2322761 29 100.0 32 ............................. ACCTATCGATGCAGGTCGCACCGTGCGCAAAA 2322822 29 100.0 32 ............................. TGTGTGGGCGGAAAATGACATTAACCCAGCCA 2322883 29 100.0 32 ............................. GATGGCGTTGCGCAGACCCTCAGCGGTGCCGG 2322944 29 100.0 32 ............................. GAGCTGGGATGCGAACACGAACGCGCCCGGAA 2323005 29 100.0 32 ............................. ACCCCGTACGCGGCCCGCCAACACGAAGAGGT 2323066 29 100.0 32 ............................. CTAGGCCGTAAGTCTTACGGCTTCGAAATCAA 2323127 29 100.0 32 ............................. GGATACATCATGAGCGACCTGGTCGAAACACT 2323188 29 100.0 32 ............................. GGGACGAAGCCAGTGTTTACCACCGGGTGGAG 2323249 29 100.0 48 ............................. GACGCCAGACCACAGCTCACCCAGCCACTGCGGCGGGTTTGCGGCCAG 2323326 29 96.6 32 ............................T TCTGCGTTGGGTGATTGGACGGTGTACACCTT 2323387 29 100.0 32 ............................. ACGACACCGGCTTAAAACCATCGTTGAGCACT 2323448 29 100.0 32 ............................. CCACGGCCCGGCTATCTCGAAGCTTATGCAGA 2323509 29 100.0 32 ............................. GCGGCACCGACACCGCCCACGGCGGCACCCAA 2323570 29 100.0 32 ............................. GTTTCACCAGGTACCGCTAACCCCCGCAGCGA 2323631 29 100.0 32 ............................. TCCCACGAAGTCGCATTACCCGGCAACGTTTC 2323692 29 100.0 32 ............................. GCGTGGCCCGCGCCACTGAGTCACTGGTATCC 2323753 29 100.0 32 ............................. CCGAACCGGCGTTGATTCCCCCCATGCTTACG 2323814 29 100.0 32 ............................. CACTGGGGCAGGGGTGGATACTTAATGTCGTC 2323875 29 100.0 32 ............................. ACGGTCTGAAAGAGTCCAATTTGGAACAATAC 2323936 29 96.6 32 ............................T CCAACCCCACCGACAAACAAGAACTCGAAACA 2323997 29 100.0 32 ............................. CAGGACGGCTCCAACCCGGCGTCTGACATGCT 2324058 29 100.0 32 ............................. CTAGGCCGCAAGTCTTACGGCTTCGAGATTAA 2324119 29 96.6 32 ............................G ATACACTCGATGCGGCTGGCCTCATGCTGTCT 2324180 29 100.0 32 ............................. TACCATGCTCTGCTGAACTCCGGTACATAATC 2324241 29 100.0 32 ............................. CCGGCGATGACCTCATGGTGGGGGCTTACTGA 2324302 29 100.0 32 ............................. GCGGCCACTAGCCCGCGTATCAAGGGCGTTAC 2324363 29 100.0 32 ............................. CAACTCATGATTTAGGCCTCCCCATCGAGGTT 2324424 29 100.0 32 ............................. TTTGAGGTGGTCCCACTTCTCTACCTCGTTGG 2324485 29 100.0 32 ............................. AAGTTTTCCTGCGGTAGCAGGTCGCGGATTGC 2324546 29 100.0 32 ............................. TAGCAGGCAAGCAGTTCTTCGACACCGACAAG 2324607 29 96.6 32 ............................G TGTGCTACCGCGCTGCGCTGGCCGATATTGAA 2324668 29 100.0 32 ............................. CGTCCATGTGTTCGGATGCCCTAGCGCGTCCA 2324729 29 96.6 32 ............................G GAAGGCGTGGAGGTCGCGGCCCATGACGGCTT 2324790 29 100.0 32 ............................. ACCATGAATGCCGTGTCAGGTGCTACGGCATC 2324851 29 96.6 32 ............................G TACCCCTCAAATGTGGCAGTGGGTAGCAGGGA 2324912 29 100.0 32 ............................. ACCAGACAGGGATTCAAAAACACCCTTGAGCT 2324973 29 100.0 32 ............................. TCTGGGCCGACAAATAACACCCCCCAAAAAAC 2325034 29 100.0 32 ............................. AACTACGCAAACCCACCAGCGACACCAATTAA 2325095 29 100.0 32 ............................. CCGACCGGGTACGCCTACTGTCACGGCATTTC 2325156 29 96.6 32 ............................G TAGAAATGACTACCTAAGCAATAAAGAGATGG 2325217 29 100.0 32 ............................. TCAGCACCGACGCGTGGGAAAGTAGAAATGAC 2325278 29 100.0 32 ............................. TCACCACCGTTGAGGACTTCGAGGGCGCGCCA 2325339 29 100.0 32 ............................. GCCGCAGCCGACATTTACAACGAGGCCAACCG 2325400 29 100.0 32 ............................. GGCCACCTATCGCCCCGGCGTGTAGGTGAACT 2325461 29 100.0 32 ............................. AGGGCGGCGAGGGATTCGAAAAGCTCAAGGGG 2325522 29 89.7 31 ..........................TAG GAGGCTCACATGATCGATACCCGTCCGGTGG 2325582 29 96.6 32 ............................T GTCACACAAGGGTGTCACAGCGCCCCGACCCG 2325643 29 100.0 32 ............................. CGGTTTGGAACCGGCATCATCCCCATAATGGA 2325704 29 96.6 32 ............................G TAATGGGCCTGGGAATCGCTTTATCGCTCACC 2325765 29 96.6 32 ............................G TTCTGGAAGTGGTCATTAAACAGTTCCATTAC 2325826 29 100.0 32 ............................. ATCGGCTCCGACGGCTACGGCCTCCGCGAGGG 2325887 29 100.0 32 ............................. CTTACTGCGCTTCTCCCCCTCCCTGGTCTCCC 2325948 29 100.0 32 ............................. TCTACGGGCCACAACCAAATCTCATAGCAGCC 2326009 29 96.6 32 ............................G CTTTATGTAGGTAATAAAATCCCTAAGCAGGT 2326070 29 100.0 32 ............................. TCATCACCGACGCGTGGGAAAGTAGAAATGAC 2326131 29 100.0 32 ............................. CAGGCACCGATCACTCCATGATGTACCGCGAG 2326192 29 100.0 32 ............................. CACGCGAGGATTACACGGAGGTGCAGGAATGA 2326253 29 96.6 32 ............................G AACGGCGAGAGTGAACTAGCAGGCAAGCAATT 2326314 29 100.0 32 ............................. GGTGCGCCACAAGGCGGATTCAGTGGTGCGGA 2326375 29 100.0 32 ............................. CATCACCATCATTGGACGCTAAACCAACAGCC 2326436 29 96.6 32 ............................G GGTGAGAACGTTCATTACGCCACCATCCAATC 2326497 29 96.6 32 ............................T CGTGCCCACCCTGTCCGCGCTGTCGGATGAAA 2326558 29 100.0 32 ............................. CTCACCCCACGCGATGATCTACCCCGCGCCTG 2326619 29 100.0 32 ............................. GCCTTCTGGCTGAGGCCAGCCCCGGCCCGTGG 2326680 29 100.0 32 ............................. GCAAGGCCAGCGCACGGGAGCGCTTCGAGGAA 2326741 29 100.0 32 ............................. ACAGACCACACCGACCCCGGCGCTGGTTTCCC 2326802 29 100.0 32 ............................. CACCGCAGCGGAGACACTTTCCCCAAACAACC 2326863 29 100.0 32 ............................. CGCCCCCACAGTCAGGCCCGAATCAGACTGCA 2326924 29 100.0 32 ............................. GCCCAGCAGGTAAAAGACGCCCTCCAAGAACT 2326985 29 100.0 32 ............................. TATCCCAACGATTCGTAGACGAGACAGACGCG 2327046 29 100.0 32 ............................. GCGGCACCGACACCGCCCACGGCGGCACCCAA 2327107 29 96.6 32 ............................T TTTGCTGCCATCAGCCACCGCCTTATCCACGT 2327168 29 100.0 32 ............................. CCACCCTCAAATGTGGCAGTGGGTAGCAGGAG 2327229 29 96.6 32 ............................G AAGTGCTTCCTCCTTTTCTTTCAATGCCTCAA 2327290 29 100.0 32 ............................. CCTTAAGGACTTCGAGAACGCGCCAGAGGGCA 2327351 29 100.0 32 ............................. GCACAATGTCGCTCACCTCGCCTACCATGACG 2327412 29 100.0 32 ............................. ATACACCGCCCTAGTGGACTTCCTCACCAATC 2327473 29 96.6 32 ............................T TTTGCTGCCATCAGCCACCGCCTTATCCACGT 2327534 29 100.0 32 ............................. CATAGCAGTCCCTCATTTCAATATCGGCCAGC 2327595 29 96.6 0 ...........................G. | ========== ====== ====== ====== ============================= ================================================ ================== 109 29 99.2 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGTAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGTGCTGCCCGAAATGCTCGCCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : CTTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTTAAAATCGGACCACACGGTCCCTACATCCTCACCACAAGATGCGAGCAATCCTCATTTACGCTTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGAGTGAAACCCTATACAGCGTCGAAGCGACATTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //