Array 1 53-3704 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJJX01000029.1 Ancylomarina longa strain T3-2 S1-C scaffold_28, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 53 30 100.0 36 .............................. TCTTGTGTTACTTTTATATTACCACTCATCCCATCA 119 30 100.0 36 .............................. AAATTAGGAAGTAAGCCATTTACCTCTTTAAATTCA 185 30 100.0 37 .............................. GACTATTACGGCATCGAATGGAGCTTTCTTTTGTTGG 252 30 100.0 37 .............................. ATATTTATAAAAGCTTTTCTCGGTTCGGTGTCCTGTT 319 30 100.0 36 .............................. ATTAAATACAGTAAGGAAAATTGGCCAGAAATTAAG 385 30 100.0 35 .............................. GGAAAAGAATATTACGTAGAACAAAAGGGAATAGT 450 30 100.0 35 .............................. TCACAACAAACTGATGTAATTATAAAAGACTCATT 515 30 100.0 25 .............................. ATGAGGCTGTCTGAACGAGACAATT Deletion [570] 570 30 76.7 35 .CGATG...C.C.................. TCACAACAAACTGATGTAATTATAAAAGACTCATT CAG [579] 638 30 100.0 37 .............................. ATGAGGCTGTCTGAACGAGACAATTCCGATGATCCAG 705 30 100.0 30 .............................. TTATAAGACTTAGTAGTTTCGGCATCATCC 765 30 100.0 36 .............................. TCCTCCAGAGCAGTTACATTAATTTTAAACAATAAT 831 30 100.0 37 .............................. CAAATGTAATAAAATGTTATCATTTTCCAACTACAAA 898 30 100.0 37 .............................. GTGTCAACCGCTTCGGCTTGCTCCGAGGTAAGCGATA 965 30 100.0 35 .............................. CGTATACCCATTTCCAAGCTCTCAAATTCTTCAAA 1030 30 100.0 36 .............................. GGAATGGCGAATGCAATTATCATCATCATTAATAAT 1096 30 100.0 37 .............................. TTTACTCCTCCGGTGCCGTAAATAGTAATGTAACGTC 1163 30 100.0 35 .............................. GATAACCAAATAAAGAATCGTTTTAAATTGATTTT 1228 30 100.0 34 .............................. TCATAGTAATATTTCCGCTTACCGTTTACCGTTA 1292 30 100.0 37 .............................. CTTGATGGGTCAATGTATAATCCTCCGATTGAACCTG 1359 30 100.0 36 .............................. CCAATTAATGAAGTAGATGTTGCCGTGTCCCAAACT 1425 30 100.0 36 .............................. AAACGATCGTATTCCTTATTGTATTCAACCACAAAC 1491 30 100.0 35 .............................. TAACCTCTCCAACCTTTGGCAACTTATCAGGCTAC 1556 30 100.0 36 .............................. AAAAGTACAAAACGAGCATGTAAAATGCACCATAAT 1622 30 100.0 35 .............................. AAAGATAACGACAAAGTAACCGAGTCTATCTCGTT 1687 30 100.0 37 .............................. CAGCTACCATACTTGCAGCCGTAGGTTGGTTTAGCTT 1754 30 100.0 37 .............................. GAAGGTAAAAGCTTTGACATTGACAAGGATAACGAAC 1821 30 100.0 36 .............................. TCATTTACAGCCTATGTTGAAATATCTGGCGTAGGA 1887 30 100.0 36 .............................. ACAATACCCACATCGATATTATTGGCCGAATATTTT 1953 30 100.0 37 .............................. TCCCGACCGAAATCGGGATGACTACGTAAACACTACT 2020 30 100.0 36 .............................. AATACAGTAAAAGCACGTACAAGGAAATCTACCGAT 2086 30 100.0 36 .............................. TCGTAAGCCGGGCGCATAAATGGTTGTGCTGCCTGA 2152 30 100.0 36 .............................. GTTAAGACAGCAGGATCAGCAACCTTATACCACAAA 2218 30 100.0 35 .............................. AAAGACAGCTTTGAAAAACTTCAGAGAGAAGCACA 2283 30 100.0 37 .............................. GAGACTTCGATGAAGCTAAATCTCAGGAATTGGCTAA 2350 30 100.0 36 .............................. ATCTTTACCTTTAACTTTACGGCATCAAATTCAGAA 2416 30 100.0 36 .............................. AGATCAAGAGGTAGCCTCTCTTTTTTATGAATTTAT 2482 30 100.0 36 .............................. AAATAATCTAAATCTGTGCCTATTACGAACGATACA 2548 30 100.0 36 .............................. ACAAAAACAACAGTTGCATCTTCCAATGAAGGCATG 2614 30 100.0 36 .............................. AGAACAATCGCCGCCGGAAACGCCTTATTCTATTTT 2680 30 100.0 36 .............................. TCTGTCATCTGTGAAGTTTCTAAAAGAAAAACACTT 2746 30 100.0 37 .............................. TCATCTACGGCAATGGCTTCCTCTGATACTGTTATAT 2813 30 100.0 37 .............................. ATTGTAATTAAAGGCGATAGTGCCGGTGTTTTACAGA 2880 30 100.0 36 .............................. ATAGCAAATATATATTGCAAATTGAGTGAAGACGAC 2946 30 100.0 36 .............................. CAAGTATCAGCAAATATGCGAGAAAATTTTAAAAGG 3012 30 100.0 37 .............................. TCTGTATCCCATGTAAGTCTACCGTTATTATCAAATC 3079 30 100.0 36 .............................. CAACATTGAAGCATACAAAGCATTTAAAGAAAGAGC 3145 30 100.0 36 .............................. ATATCTTCAGCTTCGAGATTTACTTTGGAGGCCCAA 3211 30 100.0 37 .............................. ACCTGAATAGATGCACCTGTAATAACATCTTTCGAAT 3278 30 100.0 37 .............................. CATAGATTCGCCAGGCGGAACCGTTGATGGCACCGAA 3345 30 100.0 37 .............................. TAATGTTGTGTTTGTTAGTTATCTTAATTTTATGAAT 3412 30 100.0 36 .............................. AAGGATATTTCTTCGTCGTCATTCATCGAGGGATAT 3478 30 100.0 35 .............................. TTATTTATCAGAATTAAATAGCAGTAAAGTTTAAA 3543 30 100.0 36 .............................. AGGGCTGCTGGGTGTGGCCCTTGAATTTATTATAGG 3609 30 100.0 36 .............................. AGGTTGTAGACCAATTAATTGTTGTGGCGAAAGCTA 3675 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 56 30 99.6 36 CTCTCAATCGTACCAAAGTGGAATTGAAAT # Left flank : AAAGTGGAATTGAAATAGTTAAGACCTAAACTATCTTTTTGCCAACTCAACAC # Right flank : TGTAGCACCAATAGAGGGAATTAAGCCTTGTTATCAATCTCTTTTTATAGATTGGGATTTTTCACATCTGTATCGATTCACAATGAATGCAATCTTAAAAAAAGATAAAGAGCCTTACAAGACCCTTTATCAAAGAAAACCAATTAATTATGCTATTAAAACCAAAATCCCGGGACACCACTCCCAATATTTGGGAAACCATTAATAAATGATTTCGCACGATTAATTACAAGCACCAGACCAAAAAATACAAACAACTCAAAAACAGACAACTTAGTCAACTCAGCTAATATTATTCCTATTCTAAAGTGTCCGATTGCATCACAAAGTATGTTCGTTTTCGGACGGTAAAAAAGAATTTCTACACGTTATTACTATTAGCGATAAACCTGATCACCGGAACTACTTTTTCCATGAATCCAGATATCACCATTTTCATGATACAATTTTTTTTCTGTCTTTTGATTTCCAACTCTCAAATCACCGGAGGAAGCCACCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCAATCGTACCAAAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : NA // Array 1 5247-53 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJJX01000015.1 Ancylomarina longa strain T3-2 S1-C scaffold_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 5246 30 100.0 35 .............................. CAAGTGTACAAAATGTATAACTAAAAACATAGTTC 5181 30 100.0 37 .............................. GACTATCGAAGTTTTTGTTATGGATGATGCCGAAACT 5114 30 100.0 36 .............................. CGGGATTAAAAAGTTTGGAAAATGGTCGAAAAAAAA 5048 30 100.0 36 .............................. CACCAAAGGTTGCCGATTTAATTGATGGATTGGCAG 4982 30 100.0 37 .............................. GAGTTACTAAAGTTGGATGTAAAAATTAATGATAAAA 4915 30 100.0 36 .............................. ACAAAAAGATCCTTTTCCCCAGCAATGTGAGTATTC 4849 30 100.0 37 .............................. ATAGTTGAATACTTTGTGCATGGATATGTACCTGCAA 4782 30 100.0 36 .............................. GCAATTGCGGGGGCGGTTGTGTTTGCCACCAGTGCG 4716 30 100.0 37 .............................. TGAGTACCAGTGTAGCTCCTATGCCGATGTGCATTGG 4649 30 100.0 36 .............................. AAGGTTCTACAACTGCAGGTGCTGGAACTGTTGTGT 4583 30 100.0 36 .............................. CCTGTTGGTACTAGTTTATTAATAGGGGGCGGCGCA 4517 30 100.0 36 .............................. ACACCAGACATAGACTTTACAGGCGGCGTCGATGCA 4451 30 100.0 37 .............................. CGTTAATTTTGTGCTTACGGTTTACAATGGTAATTGG 4384 30 100.0 37 .............................. AATTGCTACTTCGCCATTTTTACCATACACTTTTACA 4317 30 100.0 37 .............................. CTACAATGCCGTTGCTAAAAGCATAAAAGCCATAATC 4250 30 100.0 36 .............................. AATAGAGAGTGCTTGCGAAAAATTGTTGTTTAAAAT 4184 30 100.0 36 .............................. ACTTATAAGGCGTCTGTGTTTGGTACGGTGTGGATT 4118 30 100.0 35 .............................. TGAAGTTATTAGCATGGATTCTTTAAGTAAATTAA 4053 30 100.0 35 .............................. CCTATCCCCTGTTCAATGTCTTTAGTAACATAACT 3988 30 100.0 36 .............................. GATTGAAAGTGCTTGCGAAAAATTGTTGTTTAAAAT 3922 30 100.0 36 .............................. AGGAAAAGCGATGCTGAATACGTTTCTATGATGTGT 3856 30 100.0 36 .............................. TCATTCAAAATTACCATGATGTAATCGCCTACTGCT 3790 30 100.0 37 .............................. ATGGATCCGGAAGAAATTGTTGTTTCGTGGAAATCGC 3723 30 100.0 37 .............................. TGGATTCTTTAAGTAAATTAATTAAACATTACAAACT 3656 30 100.0 36 .............................. TCGGGATATGTTTATCAATATACTTTGGAAGATAAA 3590 30 100.0 36 .............................. AGGCGTAAAATTCGCCTATGCCGTAGCTAAGAATAA 3524 30 100.0 37 .............................. TCGGTAATGTTCATGTCCTCGAGTAGCTTTTTTCTTT 3457 30 100.0 36 .............................. AAGAACAAGGAACACGCCGCCAACAAAATGATATGC 3391 30 100.0 36 .............................. ATTTTTCAGTTCATGATAACACCCCCGATTTAGATG 3325 30 100.0 36 .............................. AAAAAGACGAGTCCGGTAATCCCATTCCAGATGCCA 3259 30 100.0 37 .............................. TTATTAGTGAGAAAGAGTATCAGGATGAAATCGATAA 3192 30 100.0 37 .............................. AATATAGCTACGTGCTGTTAAAGAAGATAAAAAGAGA 3125 30 100.0 36 .............................. AAAAAAAGATAGGAAGCTCGCAACCTCCTACCTTTA 3059 30 100.0 35 .............................. TTGTTGCAAGACTCCCGTAATGAAAAAAAAGGATA 2994 30 100.0 35 .............................. GAACGTAAAGCATTTTCAAAATGCTCCCAAATATC 2929 30 100.0 36 .............................. CCCAAAAATGGAGATTAAAAGGCCATGCAATTGATA 2863 30 100.0 37 .............................. CTAAAACAACTGGTTATAATAATGCTACGTCAGGATT 2796 30 100.0 37 .............................. CATGTACCCGGTATTGTATGAAGCTGCAGCTTTAATA 2729 30 100.0 35 .............................. CTAATAGCCATTGTTGTTTCGCTATTATTTCGACC 2664 30 100.0 36 .............................. GCACTTCCCTTACCGGGAAGTAGAGAGTAAATAATT 2598 30 100.0 36 .............................. ATTAAATACAGTAAGAAAAATTGGCCAGAGATTAAA 2532 30 100.0 36 .............................. GTATTCAACCACCACACATAAGTTTTACTATTCATA 2466 30 100.0 35 .............................. CAGAATTGCGATACTTTATGCGAATTAAGACCAGA 2401 30 100.0 36 .............................. GCAGGAACTTTTATGGCAACAAAGTTAGTCTTGGTT 2335 30 100.0 37 .............................. AGTAATAACCAACCAATTGATTTCGTGCGGAAGCTTA 2268 30 100.0 36 .............................. AACAATAATAAACGAAGGCTATTGCCCTAATTGCGG 2202 30 100.0 36 .............................. GGAACTACATTGGACATTAAGGAAACGTAGGATTTA 2136 30 100.0 35 .............................. TCTTCACGAACAATTGCACCAATGTAGCGTTTCGG 2071 30 100.0 36 .............................. AATTGAGGTATTCGATAAGGTGTACCGCTTGAGTCA 2005 30 100.0 36 .............................. TAGCCATCGGTTGGGCTATCTTCCCTCGCTGCAATA 1939 30 100.0 36 .............................. TAGTTTAATTCTAATTTATTGCCGCTACCGTGAACC 1873 30 100.0 36 .............................. CTTCTACCTTCAGCTATACCAGACTCAAGATATATT 1807 30 100.0 37 .............................. TACTATATCAAAGCCTGGGCATTTATCAAGGATATCA 1740 30 100.0 36 .............................. AATAATATTCTCACATCAGACATTTGCTGCAAAATT 1674 30 100.0 36 .............................. ATAAAAGAAAGTGCCAATAAACACAATGAAGGTAAT 1608 30 100.0 36 .............................. CAGATTCGAGCATGAATTCCCCATTCAGGTCTTCCT 1542 30 100.0 36 .............................. ATTTGTATTTGGTGCAGAATAAAACTTTGGCTTAAT 1476 30 100.0 36 .............................. ATCGCTAAATCGCTAGATGTTTTCAAGGTCGAGATC 1410 30 100.0 37 .............................. ATTTACGAAACTTTGTTAATATTCAATTTAAAACAAA 1343 30 100.0 36 .............................. CCGGTCCTTATACGCTAACTTTAAAAATTGAGGAAG 1277 30 100.0 36 .............................. TATACTCTGGCAGAAAGTAAAACAGATGCTTGGGTA 1211 30 100.0 37 .............................. ATAATAGGCTTAATATAAACCATTACCCAACAGCAAT 1144 30 100.0 37 .............................. GGAATTGAGGTTATTATTGCAGACAGTGTTTCACACG 1077 30 100.0 36 .............................. ACAAGAAGATGAACTATTAAGTGAATCGTATGTCGT 1011 30 100.0 36 .............................. TGGGGAAGAGTTACGCCAATACATAAAAAATTCGTC 945 30 100.0 36 .............................. GATAACGATAGCGACCCAACAAACGAGAATCAGGAT 879 30 100.0 37 .............................. TATGTTCATGTTCTATTTACATTGTTTGGCATTGAAT 812 30 100.0 37 .............................. TAAAACAGGAGTTTGGCAGCTTGACGATTTGTACGTA 745 30 100.0 35 .............................. CCCGATCGGAGTAATCGCTGTTAATGATAGTGTTA 680 30 100.0 35 .............................. TAATTGCGAACTTGCGCATTATTTACTAAAAGAAA 615 30 100.0 36 .............................. AAAGATAATAACAAGCGGAAGCGTAAAAGAATTAAC 549 30 100.0 37 .............................. AAGTATATAGAGAGGCCTCCAGACGAGCGTCAAGCGT 482 30 100.0 36 .............................. CCGTGTATAGTTAATTTATTTGCTACATAATCTGCA 416 30 100.0 37 .............................. TGATTCCGCCAACATATGGCCCTATTTCCTTAGTAAG 349 30 100.0 37 .............................. TCAAATCACGATGCTTCTCAAAAATTTCATTCTTGAA 282 30 100.0 36 .............................. AAAAGGATTAATTTCATTGGTAATGTATTCCAGTTC 216 30 100.0 37 .............................. AGACCTTATTTAAAGTATTATTATAAAGAGTTGGAAT 149 30 100.0 37 .............................. CCTGATGGTATAATCTCAACGGCTGAAAAAGGACAAG 82 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 79 30 100.0 36 CTCTCAATCGTACCAAAGTGGAATTGAAAT # Left flank : ATTTATTGGTAATGTATGTGATATTAATGTATGACATGGGCGAAAAACGAGTTGGCAAAATGTTAAAACTGTGCAGACAATATTTAAATTGGATTCAAAACTCTGTTTTCGAAGGCGAAATATCGGAGGTGAAACTAAAAGAGTTAATCTCGAGAGCAGAATTTATAATGAATGAAGAAGAACACGATAGCTTGATTGTATTTAAAAGTAGAGATCAAAAATGGCTCGAGAAAGAAGTGATTGGACATGAAAAAAATGATCTCGATCAATTCTTATAGTTGTCGATAAGGTATTATCCGCCTCCTCTCTCCCATTCGCAGAAATATCATTTCTCTATTTACGATCTTTGACATACTAAAAAAACTAATGTTTCGGCAATGTTGTCGAAATCCCGTATATTTTATACTTTTACCCATCGACAACTTATACTTACTATTTTAGCTATATCTGCAAATCTTAATTAATTGATTTTCAGGTATTTTTTTTGAGTCGTCGATCGA # Right flank : TAGTTAAGACCTAAACTATCTTTTTGCCAACTCAACACTCTCAATCGTACCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCAATCGTACCAAAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //