Array 1 251254-251026 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386948.1 Bifidobacterium tsurumiense DSM 17777 G479DRAFT_scaffold00002.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 251253 36 100.0 28 .................................... TTTGGCCATTCTTGTTGTTGGCGTCCGT 251189 36 100.0 28 .................................... AACGAACAGGAATTCCTCGACGGGCACG 251125 36 100.0 28 .................................... AGCACTAATCAGAGCTTGGCCGGATGCC 251061 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 4 36 100.0 28 GCTGTGAATTAGCTTTCTACCCTCTTGATAAGATTG # Left flank : CCAACGATGATCACGAATACGTAATCACTCGAATCGGAGTCAGACATTTCCGAAATTCCAACAAGTACCACGATAATTGTCAGTATTACGCCGACCCACGCCAATACTTTTGCTGTCGCAATATACCCAAAGCCATACCTTGAATCCACATTCCTAAGCATCGGTGGTTGAGTTTGCATTTTCTGATACTGTGGGTTCCCTTGATTTTGCGATGCTTGATTTATATTCTGTGACATGGCTTCCCTCCCTGCCTTTATATAGTCACATGCTCTTAAGGCTAGTGCCATCGAACCATTTCTCATAATATCTGTAGATAAGTCTCGAATATTGATCCATTTCAAATAGGAGTAAATACGACACCATCGTTCTGATTCCACGTTTTAGCTGATTCTCGTTTCCTGGAGTGATGTAAAGCGCACATCATCAGCTAACAAGAAGTAGCACCTATCATGTATTCGGCGTAATTGTTAAGATAGCTACAATGCAAGCCACCCGAACAG # Right flank : TGCGACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGAATTAGCTTTCTACCCTCTTGATAAGATTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 36684-37149 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUCL01000004.1 Bifidobacterium tsurumiense DSM 17777 G479DRAFT_scaffold00003.3_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 36684 36 100.0 36 .................................... TGGGCGCTCAAAGCCCTCGACGAGGAGCAATGCGAG 36756 36 100.0 34 .................................... GTGATCGCGTCACCTGCGTGTTCCTGCCGGTCAC 36826 36 100.0 38 .................................... CTCTGCCTGACTGGATTGCCTTCGCGTTCATGCCGTGG 36900 36 100.0 36 .................................... ACGGCCCACTGGCCGGTGAACCGGTCGAATGCGGGG 36972 36 97.2 35 ............................A....... CCAACGAATACGGAGCAACACGAAAGGACATGACC 37043 36 94.4 35 ...............G............A....... AACCGATTCGGACGCGATGACGGACCGGTCGGAGT 37114 36 86.1 0 ..........C..AGT............A....... | ========== ====== ====== ====== ==================================== ====================================== ================== 7 36 96.8 36 ATTGCCAGAGTTATAAGCTCTGGCCTTCGTTGAGGA # Left flank : TACTTGATTGCGTATGACATCGTCGATGACAACAGACGAAGTCATGTGGCAAAAGCATTGCAATCATATGGAGAGCGGTTGCAATACAGCGTATTTTTGCTTGAAGTCAGGCCGGCACAGATGATTCGAGTTCGCCAGCAATTGGAGTCTGAAATGGATCCGCAAGATAATTCGATTATTGTGTGTCCGCTCGGAAACAGCGCTCGTGCTGCTCAAGAGATTCAGTTTTTAGGAAGACATAGCTACGAGGATGTGGCTATTCCTACAGTGATTTAGCGCATAATGCGCTGGTTGTTTGATAATTCAAGAGTGGATTTTACATGGTTATGTGGTTGCGAGAGGTTCATCAGGTGGGAGATGGTGCCTCAAGCACTCGCGGTTGGAATTCTGCGGATTGTTGAGCGTGTTTGTGTTTGTGGGCCTTTGTGAATGGCGCTTTCGGAGAGCCGCTCGCGAAATAGGTGATTTATGCAGTCGCTCGAGTCCTTTATTATGGGTCT # Right flank : AGCGTTGAACGTCAATTGTCTTGATCCCATTTGGAAAATCTCCTGCATCGTGAACCAGCGATTGAGACGCAATTTAACTCAAAAATCGTTCATTCATGGCAGGATATAATCCATGCTTAGCATTCGCTGGTTTGCGGAATCGGCCACGTCGTTCCCACCTCGCCACTGCTATAGTCAAAGACCATGAAGCTCCTGCACACCGAAAGACTGACGCTCAGGCCGTGGCGCGAGGATGATGCGCCGACCTTGTTCGCTTTGGGGTCTGAGCCGAGCATTGGTCTCAATGCAGGGTGGTCTCCTATTCGGGATATTGAAAATGCTCGGGATGTCATTGAATCGGTATTGAGCAATGACTTCACATATGCAATGACCCTTCGTGAATCAGATGAACTTGTCGGGTGCATTGCGCTGAAACCAGTAGCCGAATCGGTGCTCTCTCTCGTCCATAAAGGTCAGATTGCGGGATTGGAAACCGATGAGTTGGACAACTTAGATCAAAC # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCCAGAGTTATAAGCTCTGGCCTTCGTTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //