Array 1 205516-205945 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KK017663.1 Staphylococcus aureus M0605 adACQ-supercont1.3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	==============================	============================	==================
    205516	    30	  63.3	    28	...T...........AT.CCC..C.TGC.C	ATTATTGTAAGCTGACTTTCCGCCAGCT	
    205574	    30	  76.7	    26	...A..............CCC.....C.TT	GCCTGTAGAATTTCTTTTCGAAATTC  	C [205597]
    205631	    30	  76.7	    26	...............TA.CCC.....C.C.	TTATTGTAAGCTGACTTTCCGCCAGC  	T,C [205647,205655]
    205690	    29	  83.3	    27	..................C.-.C...C.C.	TTATTGTAAGCTGACTTTCCGCCAGCT 	
    205746	    30	  76.7	    27	...A..............CCC.....C.TT	GCCTGTAGAAATTGGGAATCCAATTTC 	C [205769]
    205804	    29	  83.3	    27	..................C.-.C...C.C.	TTATTGTAAGCTGACTTACCATCAGCT 	
    205860	    30	 100.0	    26	..............................	GTTTGTTATAGGTGTTATCATCAGCT  	
    205916	    30	 100.0	     0	..............................	|                           	
==========	======	======	======	==============================	============================	==================
         8	    30	  82.5	    27	TCTGTGTTGGGGCCCCGCTATAATTGAAAA	                            	       

# Left flank :   ATTATAAGTACGATGAGGACGTGCTTGCATTGTGGAATAAAGTCAATCCATCCTTCGCGCTAAAATCGATGTTTGGTGGATATGATGAATTAATGGAACCTGTGTGTAACACATTTACTGCTAAGGAGCCATTTAATCAACTTGGTGGTTATCCATATTTTGACCAAATAGATCCAAGAACGAACGATCAAGAACTGAAAATGTATGATAGAGTCTTACTGCAAATTGATTCTACAAGAGATGGTAATTCTTCGATTATATGGGGTGATTTAGGTATTGCCAATATCTTAGTGAAATCTACTGACCTTGAGGCTATGAAGTTTGATGATTACATGTATTCATGGGATTGCAGCTAAGAGAATCATAAAAATATATTACTTTAATAAGTGTAGTATCTATAGATCAATCTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGAGAATCCAATTTC
# Right flank :  AGTTTGTTATAGGTGTATTTTCTTTTGGTTAACTATTGTTAATATAACATTGTAGATTTTAGGATGTTGATTTTTGACTTAGCCTTTGTCTGCTTATGTTAAATGTTCCAGCTAGTCAAACATTGAGTTTGTAATTATTATATTAAGCTAGTTTAAATTTTTTGTGATTTATGTTTTATTCATACCAATTTTGTGAAATGATACAGTGACAGATGTTTATTGATTTTAAAGGGTGATGATGATGGCTATTGTAAATAAAGTGATAATTGTTGAAGGAAAATCTGATAAAAAAAGGGTGCAACAGGTTATTGCAGAACCAGTCAATATTATTTGTACTCATGGAACAATGAGTATAGATAAGCTTGATGATATGATAGAATCACTGTATGATAAACAAGTTTTTGTATTAGCCGATTCTGATGACGAAGGAGATCGAATTAGAAATTGGTTTAAACGTTATTTGAGTGAAAGTGAACATATATTTATTGATAAAACTTACT

# Questionable array : NO	 Score: 4.49
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.12, 5:0, 6:0.25, 7:-0.15, 8:0.8, 9:0.47,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCTGTGTTGGGGCCCCGCTATAATTGAAAA
# Alternate repeat :   TCTATGTTGGGGCCCCGCCCCAATTGCATT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.33%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.50,-0.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [30-13] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [61.7-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.68   Confidence: HIGH] 

# Array family : NA
//