Array 1 1714166-1712943 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP079235.1 Bifidobacterium pseudocatenulatum strain YIT11952 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1714165 36 100.0 30 .................................... CAAGGATGTCATAATCCTTGTGAATCGGAT 1714099 36 100.0 30 .................................... AACGCCCTCCCGAACAGTAGCTCCAACTGG 1714033 36 100.0 30 .................................... CGAGTCCAACACGGACGACTGGAGCGGATA 1713967 36 100.0 30 .................................... GAACGTTTCGAGATGCCGAACACCGTGTAG 1713901 36 100.0 30 .................................... CCACCCGTATTAACCAATACCACAGCCCCG 1713835 36 100.0 30 .................................... CCGCGCATTGGACGTAAATTTAGATAATAT 1713769 36 100.0 30 .................................... CTGTGGCGTTTGCGACGTTGCGTTTCCTGT 1713703 36 100.0 30 .................................... AACAGGCCGGCGACCGCGACGACGTGAAGG 1713637 36 100.0 30 .................................... AACAGGCCGGCGACCGCGACGACGTGAAGG 1713571 36 100.0 30 .................................... GCCGCACATGTGAATACAATCCGGTGGCCA 1713505 36 100.0 30 .................................... AGCTTGTGCGCTCTTGGTGGAATCAGTGTT 1713439 36 100.0 30 .................................... TCACGTCCGAATACTGCCAGCCGGTCGTGT 1713373 36 100.0 29 .................................... TCAGTCAATATCGACGGTAATACTACTGC 1713308 36 97.2 31 ...........T........................ CTGGCCGGTATCGCATACTAGATATAATGGA 1713241 36 100.0 29 .................................... GAAGGTTTTCGCGGACGGTCACATCGAGG 1713176 36 100.0 30 .................................... TGTCACACGGTTGAATAAGGTCGGCAATGC 1713110 36 100.0 30 .................................... CAACATCAGCCCCGACCGCCTCTACCAGAT 1713044 36 100.0 30 .................................... CGCCGACCTGGTCGCGGAAGACTCGTGATG 1712978 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 19 36 99.9 30 GTTTCAGATGCCTGTCAGATCAAAGACTTAGACCAC # Left flank : ATTGCGCAGGAGTACTAGATTATGATGCTTTGTTTCAAAAGGCTGCAGTTAAGAAGTTAAATGACGGATTTAATCCTGAAGAATTGAGTAGATTATTGTTGTTACAAACTGAGATAAAGTCGATTATTCAAGAAGAAATATGGAGAGAGAATTTGCCTCTGAGTATTCTTGATGAAGCTGATATAAAGTCAATGATAGCAATGGCTAAACCGCGTGTTGATACCAGTTCTCTGGGTTCTCTTTATGATAAAATTCAACTGGTAGTTGATACTGCCGGCGCTCTTGCCGAGGGCAGGATGCTTGTGATGCTTCATATAACTCAATATTGTGATAATGGCCAATTACTTTATTTGCATCGAGAATTATTAAGACACCATATGCAGCTTCTGGACCTGGAATGCTGCGACAAAAAAGTCCTTTTGACAGAGGGAAGAAGTCGGTATATCGATGGAGATTATGTTCAGTTCTCATAGAACGTTCAGGATTCTCCAAGGCTATCG # Right flank : CGGAGGGAAAGTGGATGTGACCTTGACAGAGTTTGTGCTTGAGGATCTTGTGCCAGTCGGCGAACTCAGTAATGGACGCACCGCTACGGTGCTGTCTAAGGCCGACCGTGCGCCGGTCCTTGTCGTCAAACGGAACGCTGTCCTACGTGCTCATGGGTATCAACGATTATCAGAATTTTCTCGACCGTCTTAGGGGCGAAGAGGACGTTATCCATGCGCAATGTGTTTTGTTAAATTGAAGTAGTCCAAAATGGCGTGTCAATCCAGTCCGAACGAGGTGATGACGTTTTCTTGGACTCCCCGACCGGGAGGAAAACCCCTTATGGCGAAGTACAGCAGGGAGCAGCGTGACAGGGCCGTGGACCTGTACGTCAAATACGAGCGCTGCGCCCGCCGACGTGATCCGCGAGCTTGGCTATCCCAGCAAGGGCGCGTTGCTGTCGTGGTACGCGGACCGGCTCGAGGAGGAGCGCACCGGCGTCCCCTCTAGGCGCGGGGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGCCTGTCAGATCAAAGACTTAGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //