Array 1 247-1811 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLUY01000546.1 Candidatus Thiosymbion oneisti isolate LOsNLC13024, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 247 36 97.2 36 .T.................................. TGAAAGAACCTGGACAGCCACAATACGACAAAGAAA 319 36 100.0 35 .................................... CTTAATTACCCCCCAGGAGTAATAAAGAGTAATAA 390 36 100.0 35 .................................... GTGAGCTCGGTGTCCAGGTCGGCGCGGGTCAGGCC 461 36 100.0 36 .................................... CTGGTAGAAAAGCTCGTCGTGTTGATCCCAGAACAG 533 36 100.0 35 .................................... TGCGCAGTCTCGTATAGGGATCCCCAGACGGTGTT 604 36 100.0 37 .................................... GAGATCGACATGATAGACGAGAGAGCACCGTATCGCG 677 36 100.0 38 .................................... CCGGCCTCCGTGGCCCCCAGCCCGCCGCCGTCGCTGGG 751 36 100.0 37 .................................... AGGACCCGCCAAATCAAAGACGACGAGTGGCAAAAAG 824 36 100.0 36 .................................... TCGTTGGCACCCTCATTACCCCACCCTAGTCGAGGA 896 36 100.0 37 .................................... GTGGGCCTGGAGCTGGTCGGCCGAGATCACGGGAGAT 969 36 100.0 37 .................................... AGGCCCTGCGGGGTCGAGACCGCGAGCACCCTGCCCG 1042 36 100.0 38 .................................... AGCCGCTGGATTTCCACCCCAGGGCGCACCCCCTCTAC 1116 36 100.0 37 .................................... TAGGCCCCACCGTTGGCGGCCACGTCCAGGGCCGGCT 1189 36 100.0 36 .................................... ACTGGCGCAGAAGTGCCACGCATCGTCGGCAGGAAT 1261 36 100.0 39 .................................... CCGCCGACAGCCTGTCGGCCCAAAATCAACAAAGAGAGG 1336 36 100.0 37 .................................... GAGGGGCGCCCAGCCACGATGATCAGCTCCGCGTGCT 1409 36 100.0 38 .................................... ATGATTTTGCCCCCGCGTAAATCAACCGAAACCTTGGG 1483 36 100.0 37 .................................... ACGCTAACCGAGGAGGTTAACGATGGCCGAATCCGAA 1556 36 100.0 38 .................................... ATGGGTATTCGGTGGCTCCGTGCGCGATCGATGTCTGG 1630 36 100.0 37 .................................... GAGGCCGCGCCGTGACGACCCTGGTCGGCCCGCTCCT 1703 36 100.0 37 .................................... CCGAATACGCCAGCCCGCCGGACGGCGTGCTGGAGCA 1776 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 22 36 99.9 37 GCTTCAATGAGGCCGCGGCGATTAGCCGCGGAATAC # Left flank : GATAACGCCGGACAGCCGGCAGGTGTGATTCCCGTGTATACGAATGCTGGACACCGGCCTGATGCTCTCCGCGGCGCAGAGCTGCCACCTTCCCACGCAGCACATGGGAACGAGAATGACCGCGTCGGGCCTCACCTTTTACGACACCCTCGAAGGGAGAGGGGTTGGGGTGAGGGCGAAAAAAACAGCGCACGATCGATCACAAACCGCGTCGGTTTTTACGAACGCTTAACTTAATGGCATTGGG # Right flank : CCGCCCGCGCGGCAGCCCTTTTTTGCCGCGTCTTGCCGGGCCGTTTTCGAAGGCTTGTGGCGAAGCGGTGCGAGCAGGCTTCAGGATACCCAACGAGCCTTCGAATTATAAGCCAATTACCTGATTTTTAAAGAGCGATTTTCTGCGAGCGCTGTCCGGGGTTGCGGGTACTACCGGCGTGCTCGCAGCGGCTCGGCAATGCTATGGGGCCTTGAAGAATCCTATCCTGATGATTTTCCGATACGGCGTCGCACAACGCATTTTTTGAGTGCCGTGCCTGTTCATGGACTCAGCGGGCATGGACCGGATCGGGCATCCTGGCCCCACCAGGTCCACAGGGTCCACCCCATCCACGACGGCTACCCCGAACGGACCAGGGCGGACAGCCTGATCCAGCCAGCTGCCTTGGGTCCTCAAACGATAACCGGCTCGTGCTCGATCGGGGTGAAATCCGCTTTCCCGAGACTGACGACTCGGGGCACCACCTTATCCGCTACCCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGCGGCGATTAGCCGCGGAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.90,-14.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0.41 Confidence: MEDIUM] # Array family : NA //