Array 1 192226-192018 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082926.1 Shewanella inventionis strain D1489 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 192225 28 100.0 32 ............................ GACATAATCACTTGGCTCGACTCGCGGCAAGT 192165 28 100.0 32 ............................ TTAGCTGGCTTTCCTCCCTCGGTGAGACTAAC 192105 28 100.0 31 ............................ AAAAACAATCGATATGATGTATAGGTTAATG 192046 28 82.1 0 CG.T................T......A | T [192040] ========== ====== ====== ====== ============================ ================================ ================== 4 28 95.5 32 GTGACCTGCCGAATAGGCAGCTGAAAAT # Left flank : GTGGTTATTTTAAAGTGAGTGAGGTTGAAACTGTTCCAGTTGACTGTCCTGAAGTTAGATTTAAGCGAAACCAAGCAATCGCTAAGATGTTTATTGGCGAAGCAAGGCGACGATTAAAACGTTTGGAAAAACGGGCAATAGCGAGAGGTGAGATCTTCGAACCTAGTAAAAATACTGAGCCAAGAGAGCTTGATGTTTTTCATCGAATTGCAATGACTAGTCAAAGTACCAAGCAAGATTATATATTGCATATTCAGAAGGTTGTGGGTGAGAAACAATATGAACCATTATTTAATAGTTATGGCTTTGCCACTAATAAGTTAGTTAGTGGGACCGTACCGGATTTATCATTTTTAACAGATAATGTTTAACCCTTTATTTTTAAATTATTTTTACTATATGATTTTTATGCATATTTCCCATCTCGAAAATTAAATGGTCATTATTCTATTTGGATATTTAGTGGTTGATCTTGTAGCATTTTATTTGGTAAGTTTATT # Right flank : GAAGATAATCGTTTCGACGTATATGTTCGCGCACAAACTGCCGAAAAGGTAGTAAAAGCCTCCTCTTGTGTCACTGAGAGGAGGCTTTTTATTGGTTACTCATCGGTTATTAATTTAACTCATACTGTGATGGTATTTTGTATTGGTATAGGGTGTTATTTAGGATTTTGTGCACTAGCAGTAACTATTAATTTATCTATGATTTTATCGATCACTTTATCTAAATCTTGAAAGTCTAATTTGTTGCTAGCTCCCGATTTTAACGCCTTTTTACATTTCAATAAGTCACTTCTTCCACAATGTTTTGCCAGTAAGATTACATCTGTATCTAAGCTCGCTGATACTTCTTTCAACGTATCTACTTTCTGTTGCTGAGAAATATCGACCAACATATTTTTCATCCAATCTACGTTCACTGTTGGAATCAATTCAGAATCTATTCTCTCAATATATGTGTTTGTAAGATCAATTAAGGCTTCTATTTTTTCTTTGCCACGTAG # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCTGCCGAATAGGCAGCTGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 1497615-1504964 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082926.1 Shewanella inventionis strain D1489 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1497615 28 100.0 32 ............................ ATTGATAATAGTTGGTTACTAAGTGATTGAAA 1497675 28 100.0 32 ............................ GAGTATACCCTAGATGACATATCAGAGCAGAA 1497735 28 100.0 32 ............................ TTTTCTATTAATGCTCGTGTTTATCGTGTACC 1497795 28 100.0 32 ............................ TAATTCGTCAAGAACTAAAAGACCCGTTTTAT 1497855 28 100.0 32 ............................ TACTCTCAATTGGCTCTGCTCGTGCAGCCTCA 1497915 28 100.0 32 ............................ CATTTCACGCCGACTCATCATGTCACAAACCG 1497975 28 100.0 32 ............................ TTAACGGTTAACGTCACTGTCGACGGCGTGCC 1498035 28 100.0 32 ............................ ACCTATTGCAGTGTTATTACTTCCAGTAGTAG 1498095 28 100.0 32 ............................ GTTCACGTCGTCACATTGCGATAAGTATTTCA 1498155 28 100.0 32 ............................ ACACATCGAATAAATGGTTTGCTAGCTCTGTC 1498215 28 100.0 32 ............................ AACCCGAGATACGCCTCGGTCGCACTGTTTGC 1498275 28 100.0 32 ............................ TGTCTAAAGTGTAAAACCAGTTAATTAAACCC 1498335 28 100.0 32 ............................ ACAATATATATTCATCACCTTGTGAGTTTTTA 1498395 28 100.0 32 ............................ GTACCAAAGAGGCTTCTGTTATATCCTTTGGT 1498455 28 100.0 32 ............................ TGTATTGAGTGATCACAATTGAGTTTATAAGT 1498515 28 100.0 32 ............................ GTTAGAGCCTTTACCGTAAAGATTACGGCCAT 1498575 28 100.0 32 ............................ TAATCTTGCCTTCGGCCGTCTTAAGCCTGTCG 1498635 28 100.0 32 ............................ TATCCATTTAGAATATCAATACTAATCAATCA 1498695 28 100.0 32 ............................ TTATATTGACCTCAATCTTAACTGTTAATAAA 1498755 28 100.0 32 ............................ ACTTAAACGTGCTTTCAGCAAGTCTTTATCTT 1498815 28 100.0 32 ............................ TGTTTGGTTATAGTGATTATCGTGCAGAATCA 1498875 28 100.0 32 ............................ GTACTCACTATCTTTGTCATTATACTCTATGT 1498935 28 100.0 32 ............................ ATTATCTTGCAATTCAATATCAACTATTAACC 1498995 28 100.0 32 ............................ ATTTATTTGATGTGTGGGCAACCGAAGCGAAA 1499055 28 100.0 32 ............................ AAACAGGCAGTTGACGGCCGGATGGCAAGATC 1499115 28 100.0 32 ............................ TTGTATATAATTAAATAATTCGAGACGCTCAG 1499175 28 100.0 32 ............................ TTTTCGTATTCACGTATTAACGCAATTGTAAA 1499235 28 100.0 32 ............................ TTGTATAGAAAGGGAGCTACAGGAGAGGCTTA 1499295 28 100.0 32 ............................ TATAAGTACTTGGAGTATGATCAATGACTACA 1499355 28 100.0 32 ............................ TCAAACTATTGGAGGTTAATCCACTCCGTTAT 1499415 28 100.0 32 ............................ TGGTCGCAGCAATGTAGAACCACTCGAACCGA 1499475 28 100.0 32 ............................ TATTGGCGTATCTATGACAAAGCTGCTGAGCA 1499535 28 100.0 32 ............................ TGTTGATTACATGAATAGTAATCAACAGAAGT 1499595 28 100.0 32 ............................ GTTAGAACCCTTTCCATAAAGATTACGGCCAT 1499655 28 100.0 32 ............................ TCGAGTTGTTTAATTATATGCAAGGTGAATGT 1499715 28 100.0 32 ............................ AATAAAAGACACGGACGTCCTGAACTGGCTGA 1499775 28 100.0 32 ............................ TCAGAGCGATACCAAACAGTGTCAAGCCCCTG 1499835 28 100.0 32 ............................ TTTACGGTCTTTGATGTCGTCGTACGCGCTCG 1499895 28 100.0 32 ............................ TACCATGCCCACACATGGGCGCATAAAATACC 1499955 28 100.0 32 ............................ GTTTCAAACTGACTCGCTAATGTTGGCGTGAT 1500015 28 100.0 32 ............................ ACATAACGCAGCAGTACAACGCGGGTCGTTAG 1500075 28 100.0 32 ............................ TGATTGGTTGTTCACGACTGACTTAACGTCGA 1500135 28 100.0 32 ............................ GATAACCGGTTAGTGTGGGTGTCTGACGATGA 1500195 28 100.0 32 ............................ ATAAAGGAAATAGTATGACTCAAGTACCAACT 1500255 28 100.0 32 ............................ TGCCAACTTACCGACAGCCTCAAGACTTAAAT 1500315 28 100.0 32 ............................ TGAAATCATGCTGAGAGCTCAGTCGTTGGTAG 1500375 28 100.0 32 ............................ TTCAATGATTCATACGTAAATCCTATACGTAT 1500435 28 100.0 32 ............................ AGTCCAGAGCACTTTTGGCATCCCAATGGATT 1500495 28 100.0 32 ............................ TTTGCCATTGGCTGGGGTAATGGGGAGTCTTG 1500555 28 100.0 32 ............................ TTAGTCGATAATACCTCCTTGAATCGTTTTGC 1500615 28 100.0 32 ............................ TAATGGGTCGTGCTTTGGCGAAGGCAAATAAA 1500675 28 100.0 32 ............................ ATCTGAATTAGAATCAAATTCGTATGTATAAA 1500735 28 100.0 32 ............................ TTTAGGTGTGCGCTTTCTGAATATATGCTCAT 1500795 28 100.0 32 ............................ TCAAATATAAGCGAAACCTCATCATCGGTATA 1500855 28 100.0 32 ............................ AACAAAGCCATACTTGATGACGGGTCTGAAAT 1500915 28 100.0 32 ............................ TACACAATTAGTATCTGTTAATCTCGGTAACG 1500975 28 100.0 32 ............................ TTCACTTTTTCTAACATCACAGTTTCATATGC 1501035 28 100.0 32 ............................ TGAAATAGATTGGCGAGTTTTACCATCCAGAA 1501095 28 100.0 32 ............................ GCATTGATCTGTGCTTCAAATGCATTTAGTAA 1501155 28 100.0 32 ............................ TCTACGATACCAACCCTCCCTTCGTATAGCCA 1501215 28 100.0 32 ............................ GATTAAATTGTTTATGTTTGCTGTAGTTGCAT 1501275 28 100.0 32 ............................ ATCAAAGATATGAGCGCTCAGAACTTGATCGA 1501335 28 100.0 32 ............................ TTCTAGAAGAGTAAGCCTTACAAACTTAGAGC 1501395 28 100.0 32 ............................ AGTAATCAAATCGTTTTACACTGGCGATACAC 1501455 28 100.0 32 ............................ GCAGAGAGCAAGCGCCTAGTGATATTGCTTAC 1501515 28 100.0 32 ............................ TGGCAATTAAAGGGTTAAAAGTGGCGGCATTC 1501575 28 100.0 32 ............................ CGACTGTTCATGCACTCGCTTACACAACTCTA 1501635 28 100.0 32 ............................ GATCTTCTTGGCTTTAAAGAGTGGTTTGATGA 1501695 28 100.0 32 ............................ TCTACAAGCTTGATCCTTCGAGTAATGAGTTG 1501755 28 100.0 32 ............................ TGATTGTTTTCCCGCTAAAAATCGGTTTACCG 1501815 28 100.0 32 ............................ GTTGATAATGCTGAGAACAGCTCGAATTTCAA 1501875 28 100.0 32 ............................ GCTAAAAAGATAGAAGGCTATAAAGGTGTCTG 1501935 28 100.0 32 ............................ TCTGGTATAGCGTCCCTAAATTGCTTTAGATG 1501995 28 100.0 32 ............................ ATCAGCAAGAACGGTTACTTGTGTGGAAATAT 1502055 28 100.0 32 ............................ AAGCACTTCTTGCACAGCGAAAACAGGGTGGC 1502115 28 100.0 32 ............................ TGATAGCGATTATGCAAACTCGATTGGCTTTA 1502175 28 100.0 32 ............................ AGAAAACGAGTATATAGGCGATCTCATGGATT 1502235 28 100.0 32 ............................ TGATTATGAAATTAACAGAGAGAATCCGTTAT 1502295 28 100.0 32 ............................ GTAGAGTGCTAGTTTATCATTAAAACGATTAT 1502355 28 100.0 32 ............................ TAAGGTTGGTGAGTGATGAACAACGACTTATG 1502415 28 100.0 32 ............................ TTATTATCGAATGAAATAACAACTAAATGCAA 1502475 28 100.0 32 ............................ GCAAATGTTGAATGCTCACTAACAAATTCAGT 1502535 28 100.0 32 ............................ GCAATGCTAGACGGTTACGACCCATACAAACA 1502595 28 100.0 32 ............................ TTATTCAAACCCGCTACCGTTCGTTCAGCAGG 1502655 28 100.0 32 ............................ AATTCGTTATCGCAGTCAAACCGCGAATTTAA 1502715 28 100.0 32 ............................ GTTGCTAGTCTGACATTTAACGAGATAGACAA 1502775 28 100.0 32 ............................ AGTCAAGTGTTGTACTCATATTTTACTTATGA 1502835 28 100.0 32 ............................ TCGAGCAAGTGATGGTAATACATCTGTTGTAA 1502895 28 100.0 32 ............................ TTCTCTCAAAATTTGCGACCATGCAATCCGAT 1502955 28 100.0 32 ............................ TCAGGAGCAGGAAGATTGGTGGAATGAGGGTA 1503015 28 100.0 32 ............................ AGAAAGAGCCAAATCAACAGGCCGACCATTGC 1503075 28 100.0 32 ............................ ATCAACCGGTTGCGTGAAGGCAATATCAAGTA 1503135 28 100.0 32 ............................ GCAATGGGAAGCCTTGTTCATGCTCAATAGGA 1503195 28 100.0 32 ............................ ATATTGGCGGGGCGGTTGGCGGTGACATTACC 1503255 28 100.0 32 ............................ TGAACATCATCAGCTCCATAAAGTCGAGCAAC 1503315 28 100.0 32 ............................ ACAAAAAGCGGGTAAACCTTATCGCGCTCATT 1503375 28 100.0 32 ............................ TTTTGGGTATTCTAGGGGTTTTTGAAATATGC 1503435 28 100.0 32 ............................ TTTAAGTAGCTCGCCTTGGTCTGCTTCTTGTG 1503495 28 100.0 32 ............................ GCAATTCGCAAGTGCGCAAGACGTTTGCGAGA 1503555 28 100.0 32 ............................ TCGTAGAGTGTGAAGCTGGTCGCGCAAATCCA 1503615 28 100.0 32 ............................ TGGAGATAAAAATGAAATCAATACGCAACCTC 1503675 28 100.0 32 ............................ TTTTAGCTATTTAAATCCGATGCTAATTTTCA 1503735 28 100.0 33 ............................ TCTCACTAATAACCCAATAACACCCGACTTCAA 1503796 28 100.0 32 ............................ ATTCGCAAGTATTATGCGGATTTGGGGAGACT 1503856 28 100.0 32 ............................ ACTATCATTCGTATCTGGCACGTGGCTTTTTG 1503916 28 100.0 32 ............................ TGGTAAGCGCGGCGCATAGGGATCACCTCACC 1503976 28 100.0 32 ............................ TGTCTATTTTGGCCCATACTGCTGCAAAGTCT 1504036 28 100.0 32 ............................ ATGTGTTTATTAGTCAGCCACCGACTGATCCT 1504096 28 100.0 32 ............................ TGGTCACAAATCACCGACGACGGCATTTATAT 1504156 28 100.0 32 ............................ TTCTAATTCTGTAACTTTGTCAGAAATAGAAG 1504216 28 100.0 32 ............................ GTAAGCAACACCGAATTAACTGACTATGTCGA 1504276 28 100.0 32 ............................ AATCGGGCCAGTGATTACATCAAGCACATCCA 1504336 28 100.0 32 ............................ AGTTACATCATCTATTATTTCTGCACGATTTA 1504396 28 100.0 32 ............................ TCAAGCACTAAAGTCTGCAAGCGGTTACAGAG 1504456 28 100.0 32 ............................ TTTAATGCGAAGTGTGACGGGTGAAGATACAG 1504516 28 100.0 32 ............................ TTATTAATTGCTTATACTTCCATCGGCTCATG 1504576 28 100.0 32 ............................ TGTTCGTCACGCACCATGCGCGGTACGCCATA 1504636 28 100.0 32 ............................ TCGTTGACTATCCATACTGCTGGCTTGGTAAC 1504696 28 100.0 32 ............................ TCAATAACCAGGATTTAGGGCTAGAACTCAAA 1504756 28 100.0 32 ............................ AGAGGGACTGGGAATTTGAGGAAATGATTATG 1504816 28 100.0 32 ............................ TTCCATTATGAAACCCTCTTTAAGTAAGAACT 1504876 28 100.0 32 ............................ CGAAAAGGCACGTAATCGCCCAATGCAATATC 1504936 28 89.3 0 .............T........A.A... | C [1504956] ========== ====== ====== ====== ============================ ================================= ================== 123 28 99.9 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : AAGCATACTCAATGATTTACAAGGGCTTGATTGGTTGGGTGCGTTAAGTGGCTATTGTCATATTAGCGACATATTAACTGTACCAGAACATGCTCAGTTTCGAATTATTTCTGACAAAAAAAGTAACTTAAGTAAGGCGAAATTAAGGCGCTTAATAGCACGCGGGAGTATCGATAAAGAAGGTGAGAAGCGCTACAAAATAAAAATGCTAAGCCAAGGACTTGATAATCCATACTTAGATCTATTTAGTAGTTCAACCGGACAAGTACATCGAAAATTTTTTGAATTTAGCGATATAAAAGTTAAGTCTGTAGAGGGCGTTTTCGACTCTTATGGTCTAAGTAAAACCGCAACAATTCCTTGGTTTTGACCCTTTATTTTCGCTCTTTAAAAATTAAACAGTAAAACAATGAGTTACAACAAGGTGTTTTTTATAAGGTTAAAATGTAATTTTTAACCTAACAACTTGTTGTAACTTATTTTTATGTTGATATTCTATT # Right flank : ATTAAATTTTACTCAAAAAGATTCTTGAGTTTTAACACATTATGCATCTCTTGGTAGGCCTTTTTGTATTGCTCTTATAACCCGTTGGGTTTTGCGTGAAAGTGCTTCTTGTGGCGCTTTTTGCTTTTGTTGGGTTATGGCCCAGTCGATATGTTCGAGTACCATGTCGTCGACTTCGTCGCTGTGTTTACGTTGCTCGAGTGCGTTGATGATATTTGGGTTTGCTGGGGCATTGCCTAATGCTATGGCGATATTGCGTAGCCAGCGTTTGTGGCCTATTCGCCTAATGGCGCTGCCTTCGGTTTGGCGCAAAAAAAGCGCTTCTGACCAGTTAAATAACGTGATGAGTTCTGGCTGGATCAGTGCTGGGCGGGTATGAAAGTCGGTTTCGGCTGTTACTGGTGCCTGGCTGTTAACCGGGCAAACGAGTTGGCAGTCGTCGCAGCCGTATATGCGGTTGCCTATTAACGGCCTAAATTCTTCAGGAATGGCGCCTTGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //