Array 1 52447-54530 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFFP01000008.1 Ligilactobacillus salitolerans strain YK43 sequence008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 52447 36 100.0 29 .................................... TAATTTTAGCAACGTCTACATCGTAGGGG 52512 36 100.0 30 .................................... CTTTAGCTTGCTCCGGAGTTAATTGTTCTC 52578 36 100.0 30 .................................... ATCCTCTCTTTCGTCCCAGTCGTAATCGTA 52644 36 100.0 30 .................................... GCATTTCGCTGATACTGACAGCGACAGCTT 52710 36 100.0 30 .................................... ACTAAATCACGCAATCTTCTAGCAATCGCA 52776 36 100.0 32 .................................... CCTGATATTGAAACATCTAGCGTTATTGTAAA 52844 36 100.0 30 .................................... ATTACGAAAACAAACAGGGGCAGAAAGTAT 52910 36 100.0 30 .................................... CAACCACCGACAACAAGACGTCTCCAATCA 52976 36 100.0 31 .................................... TGAACCACACACTTCTCAATGTCATAAGGTT 53043 36 100.0 30 .................................... CGGTAAGCAGAAGGCTAACACTCTGCTTAC 53109 36 100.0 30 .................................... AATGCGATCATTTTTTTGTACCATGATTGG 53175 36 100.0 30 .................................... TCTGAAAACAAATGATGTGCCTGTTGTAGT 53241 36 100.0 30 .................................... TTAAGTGTCTGTAAAATATTATGCAAGTAT 53307 36 100.0 30 .................................... TATTTCTGGACTTGGAAAAGTTAGAGATCC 53373 36 100.0 30 .................................... CGATTGTAGATGAGCCTACGATTGACCCGC 53439 36 100.0 30 .................................... TGACAACCTAAACATGTATGCCAAAACAGA 53505 36 100.0 30 .................................... GGCAGAGGTTGCCATGCGTTGTTTGAATAG 53571 36 100.0 30 .................................... CGAGGTAACTAGGAACATTGCTCAAATGCA 53637 36 100.0 30 .................................... TGACACTGGCTTTTTTCTTCATCCACATGT 53703 36 100.0 30 .................................... CACTGATGGAGTCTTGTTAGTTGATGGTGA 53769 36 100.0 30 .................................... TTCGATAAGCATACTGGTCGAGCTATGGGT 53835 36 100.0 30 .................................... TGGATGAGTATGAGATAACTTATTGGTGCG 53901 36 100.0 30 .................................... TTGTCAACAATGCCGGTTAAATGCTTAATA 53967 36 100.0 30 .................................... AAAGTATCTGGTAATCATGAATCAACTCAA 54033 36 100.0 30 .................................... ACAACAAGAAGTTTAGAGATTGGGCTAACA 54099 36 100.0 30 .................................... CCTGCGATCCTGGATGCATCTCGGGCTTCT 54165 36 100.0 30 .................................... TTGCTCTCGATGTAGACGATGGATCCTGTG 54231 36 100.0 30 .................................... TTGCCAATGATACTCAAGAAAATGTAGTCC 54297 36 100.0 30 .................................... ATATTGTTGGCGAATGTTAGCTTATAACTT 54363 36 100.0 30 .................................... CAAACAAGCCTTGTTCCTGCAAACCTGTTT 54429 36 100.0 30 .................................... ACTTAGTGAACGTTGGTGTTTCATAAACGT 54495 36 94.4 0 ..........T...................C..... | ========== ====== ====== ====== ==================================== ================================ ================== 32 36 99.8 30 GTTTCTGTACCCTTAAAGATTTAACAATGGTAAAAC # Left flank : ATATTTCTAAAAAAAAGAGTAGCGAACTAGTAGATAAACTAAAGGAGCTCAGCCAAAGCTCCAACTTAAAAATAATCTATATAAATAACAATTTGAATGCATTAAAGCTTGATCCAACTGACATTGAAAAAATCGTTGTCGTCTCAAAAGAATCCACACAATTACCACCATATGATTTACTTCTTAACTCATTTAAATTACATTATCCCAATAGTTTGCTTATTTCTGATCAAGACTTTGTTGATAGCATCTGCAGGATAGTACCATTTATTGGAAACAAGGGGGAAGATGTTTACCTGACCGGCAAAGATTTGGTACTATTAAAGATAGCAAATATATTATTTGACTACGAGACGTCGTTTGATCAAAAATATATTTCCTTAACAACTTCTGAAGTTGAGTTTCTTAACAAACAAGAACCTTAAGAAACATAAATTTTACCATAATACCACTTTTTTGCATCTTCTTTGCATGATTGTTCGGTTTTAAATTCCTTTGAG # Right flank : CAACAATATGCCTTTGCAGATCACTGGTATTGTTTCTGTACCCTTAAAGACAAAAAGAAGTAGCTCACTATTAGCAGGCTACTTCTTTTTTGTCCCTACCTCACCGGGTATCCCCCGCTCAACCACAGTCCAATGACTCCAACAACAACGACCAGTCCGATGGTAACCCACAAAAAGCCAGCGGTCAGTTCATTGCGCTTCTTTTTGCTGAAGGCTATTTCGATCCAGCCAATTGCCATCAATGCCAAAAAGATCTTAATTGCAGTTAGCCATGGATTTTCACTCCAAGCATACTTGGCGATAAAGCCCCCACTCACGATCAAAAACAAGTAACAGAACCTTGCGACCATGACCGACACCTTCGCTGTACCTGGTGCACCAAATAAACCAATCACTACTGCCAACAATAAAACGATTCCAAAAACCAGATGAACCCATGCCATACTTGTCATCTCCTCGTATTCGAATTCACCCATTATTATACACTCTACCTGAAGTTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTGTACCCTTAAAGATTTAACAATGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //