Array 1 7404-5029 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNVR010000020.1 Lactobacillus delbrueckii subsp. lactis strain FAM 11036 FAM11036-i1-1_scf20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================================================================================================================================================================================================= ================== 7403 33 100.0 35 ................................. TCTGTGCTAAGGCGGTAAGAAGCCCAGTACATCAA 7335 33 100.0 33 ................................. TAAGTGATCCACTCCACGCGATCGTGGGGCTTG 7269 33 100.0 34 ................................. AGACCTGATCTGATCTCAAACCGGCAATGGTTCT 7202 33 100.0 33 ................................. ACGCTTTTCATCGCCCGCAAGGTCGCTGTGCTC 7136 33 100.0 35 ................................. GTCGCCCACTTGGGTCACTTGGACAAGCACCATGT 7068 33 100.0 35 ................................. GTTGAAGCAAACAATATCAATGCACAAAAGACCAG 7000 33 100.0 35 ................................. AAGCGATCTTGTCCGGTTGGTCAAAGGCAAGACAG 6932 33 100.0 35 ................................. ATCTAACCCAAAAGAAGGAGCGTCAGAAGAGATAA 6864 33 100.0 36 ................................. GACCAGGCTGTCCCAACATTTATCCGGCAAAAACGT 6795 33 100.0 37 ................................. TAGTTAATAGATGGCATCAGCGTGATGATCGCTTGCC 6725 33 93.9 215 ...............................TG CTAATTTCCCATAAATTACTACTCAAAGTACTCTATTACTTGATATATCAACCTTTTAGAGGATTTCGTTGAGTTTAAGTTACAACTCAAAAAATATTATCTTAAACTTCGAAAAAGGCCGTAATAGTAGGCTTTTTAGACATTGAGTTGTAAAATCCTGGGAAATTAGCATTGAAATACAGTATCAAGGTCGTGGTTGGACACACACGTTTGCA 6477 33 100.0 36 ................................. TTATTGACAGTCAAGCAAAAGGTAAGAACGTTGCAA 6408 33 100.0 33 ................................. TGCAATGTAGGATTAAGCACTTGATCGCACAAG 6342 33 100.0 37 ................................. TCAAGGCCTTTGAGCCAGTCTCCCCAGTCAAAGCCGC 6272 33 100.0 35 ................................. TTATTGTGCGTGTACAAAGCCGCAAAGCCAGCGGC 6204 33 100.0 34 ................................. CAGATAGCCCGGCCTTGTCGAACGTCTCAGCCTG 6137 33 100.0 36 ................................. AGCGCATCGGTCATAGCTGATGCCAGGTCAGTCAAG 6068 33 100.0 35 ................................. AACGCTCCTACGGCGTAATCGGCGACCCGGAAAAG 6000 33 100.0 34 ................................. GGTGATAACCTCTGCGGCGTATTCCCGCTTTTGG 5933 33 100.0 35 ................................. TTCTGGCCACCTTGGCCAGCATGGATAACGGCGGT 5865 33 100.0 33 ................................. CCTGCAACTAAATCCTGTGTAAAAGCCGTGCTG 5799 33 100.0 33 ................................. CCTGCAACTAAATCCTGTGTAAAAGCCGTGCTG 5733 33 100.0 34 ................................. TCAATCCATGCACTGAGAGTAACCGTTTGCCCAT 5666 33 100.0 34 ................................. GCGATCGGTGGCACTCTAGTGGCGGCTGCTTTGG 5599 33 100.0 35 ................................. CCGCATAACTGGCAGACAGGTTATTTTATTGACAC 5531 33 100.0 35 ................................. AGTCGATCACTGAAGGCGACGTATCCGTATCCTTT 5463 33 100.0 34 ................................. AACTCCATTGCTGGCGGAGCTATGGTCGGCAACT 5396 33 100.0 35 ................................. ACAGGCATGGCTACGCAGTTCAAGACCATGGGTGA 5328 33 100.0 34 ................................. TTGCCCTTGATCGTCATGACCTTGGCCGTCTTCC 5261 33 100.0 34 ................................. ACTGCCGACCGCTGCCACGTAAACTGCGTCTTGA 5194 33 93.9 33 ..............................G.G GCTGAAGGGAAAGTAGCAGCAGAAAGAAGAAGC 5128 33 100.0 34 ................................. ATTTGCTGGTACAAAAGTAACAGAGTTACAACAA 5061 33 84.8 0 ..........A...AA....T......C..... | ========== ====== ====== ====== ================================= ======================================================================================================================================================================================================================= ================== 33 33 99.2 40 GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Left flank : CGGATACCCTCCGTTTTTATGGAAGTAAGTGATTGTAGATGATGATGGTAATTGTCAGTTATGACGTGAATACTGAAACTGCTTCGGGAAAGAAGAGACTAAGAAATGTTTCCAAAATATGTAACGACTATGGCCAAAGAGTTCAAAATTCAGTATTTGAGTGTCTTGTAGATTCTACAAAGCTTGAGGAAATGAAGGAACGCTTACTAAAGGTATATGATGAAGAGTGCGACAGCTTGTACTTCTTCAATGTAGGCAAAAAATATGAGAACAAAGTTCAGTCTTATGGGTGTAAACAAGTATTAGACTTGGGAAAGCCAGTTGTCTTCTAATTATCTAGACAGTGCGAGTGTGAAGCTAACAGAATTAGGCAGAGGATTCGCACTGTTTTTGACTATTTTTTTGTAGTCTTGAATATAAAATTGCAGTTTTTTAATGCTTTTTATATTTTGTATGCCCAATATTTAGCTGTGAAAATGCTTTTTTTACTAAATGTTGCG # Right flank : ATCGCTTAGATATGTGGATGCTTGATGGTCAAATTCCACTAAAAGCACTCCCTAGCGGGGTGCTTTTTAATATTTCGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAACAAACACATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATCGCCCTGCACGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAGTTGCCCTAAATGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCTCAAA # Questionable array : NO Score: 8.68 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.53, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.60,-9.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //