Array 1 2826986-2828646 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFEKH010000002.1 Phocaeicola dorei strain FDAARGOS_1224 tig00001435_arrow_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 2826986 47 97.9 30 ...A........................................... GATAACCAGATGGATAATGCTGCATTGGAC 2827063 47 100.0 30 ............................................... CCGTAACAGTTAATTGAGGAGCCTGTCCGG 2827140 47 100.0 30 ............................................... TAGCATTTAATATGGGATGGACTTCTTCAC 2827217 47 100.0 30 ............................................... GATATCGAGAGGTTGAACTCGCTTCCTCCC 2827294 47 100.0 30 ............................................... AAACCCCGAAAATAACCTTTCCGGATTATA 2827371 47 100.0 30 ............................................... AATCCTTCTTAGCATTGCCTGCAGACCATT 2827448 47 100.0 30 ............................................... GTTGATGTTCGATGCAAAGGTGCAACTTTT 2827525 47 100.0 29 ............................................... TGTTACGTTAGGGATGTTTGCCCATGCTT 2827601 47 100.0 30 ............................................... GATAACCAGATGGATAATGCTGCATTGGAC 2827678 47 100.0 30 ............................................... CAATATCAAGGAGCTAATCACATATCGCAC 2827755 47 100.0 30 ............................................... ATGCTTTCGCCGTTTCATCTTCAGTTGGAA 2827832 47 100.0 30 ............................................... GTAGGTGCATCCTTAGCACCTTGTGAGTAA 2827909 47 100.0 29 ............................................... CCGGCAAGGTCTTGTATACCAACGGTAAT 2827985 47 100.0 30 ............................................... AGGGTTTCCCAGTCAATACCTGGACAACTG 2828062 47 100.0 30 ............................................... CCATATTGGAAATTCTCATTTTCCAATCTA 2828139 47 100.0 30 ............................................... TAGCTGGTCAAACGCAGGCTGAGGAAAGTC 2828216 47 100.0 30 ............................................... CCATCTGCTAATTCATCTGTCTGAACAGCA 2828293 47 100.0 30 ............................................... CAAGCCGCGAAAGATGGGATTCTGGGGTCA 2828370 47 100.0 30 ............................................... TGGATGATAATTTGAATCCTCTTCTTTATA 2828447 47 100.0 29 ............................................... TTCTATTCTATCTATTGTTCGTGCATATT 2828523 47 100.0 30 ............................................... CTTCTGCCTTTTGTACGGAAGCATCATCGA 2828600 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 22 47 99.9 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Left flank : CCTCCTTATATAAAGGAGAGCAGAGAGGATTCTATCAAAAGGGTAAAACGATATAAAGAAGAACTTAGAAGAGATTCTATATTCTTTGCTAAAGTAGATTCAATTAAATTACTAAGGGATTCACTTAGAAATCAAAGAATCTATACCTATATCTTGAAAACTACTATCACACCAGAAAACGTAATAGTTACTGCAAGGAAATCTGGTTATCAACAAGTAACTTTAGATACTCATTATACCAAGCCACAATTATATTACTTGGTATTTACTTCTACCAAACAAATGTCAATAGAAGAGGCATCTGCTTATGCCGATAGGAATCCTGATAAAGTTACTAAACTATCACAACAACAGTATGATCAGAGATTTGGTAATCAATCATCAGAATATGATTTCTATCTTGATAACCTAGATTCTTATTATGATGACCCAGAAAACCTAGATGAGAACCCAGATGAAATTTTTGATTTCTTACTCGACTAGGGATTCTCAGCTAATAT # Right flank : CAGAATATATGTTACAAACTAATTACCAATTAGTTACACACATATTCAGGAATTAAAAACAAAGTTGTTATCTAATAAGAAATCCCGTTTCAGACGGGATTTCTTATTTTTAAAATAATTCCAATTGCTGTCCTGGAGTAGTTACACCTTGTAGTTTCTTTCCATAAAAAAGTTCAATAGCAGCAAATTGTTTATCAGTGATACACATTATTCCCACTTGTCCATATTCAGGCAAAAAAGATTTAACTCTATTTATATGAACAGTTGCATTCTCGCTACTAGCACAATGACGGACGTAAATTGAAAACTGAAACATTGTAAAGCCATCCTTTTGTAGATTTTTTCTAAAATCAGTATAAGCTTTCTTGTCCTTCTTAGTTTCCGTTGGCAAATCAAATAATACTAGTACCCACATAATCCGATATTCACTAAAACGGTCCATTATCGTTCAGGATAACTAATACGACGAATTTCTCCACAAAAACATTTATATAGAGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //