Array 1 22999-21793 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK082273.1 Paenibacillus darwinianus strain CE1 scaffold44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 22998 36 100.0 35 .................................... GCTTTTGCCTTAGCGCATGTCGCTATGGTGTAGCG 22927 36 100.0 35 .................................... GGTTGGCACGAGTGTTTTTACTTAACTTGATTATA 22856 36 100.0 36 .................................... ATGCACAAGGGTAAATTTGAAGCTTACAGCGAAATG 22784 36 100.0 38 .................................... ACGGATGCGGGGATGCCCGACCGCGCGGATTCAGCCTG 22710 36 100.0 39 .................................... CTGCTGCCTGCTGGTAGCGATGACCGGAAGCGGAAAATG 22635 36 100.0 39 .................................... TCGCGCGTTGGCGCGATTGCCGGGGCAACAGGCAGCGAC 22560 36 100.0 34 .................................... TAGCCCATCTGTCCGGACCATACGAGTTTCTTGT 22490 36 100.0 34 .................................... ATCAAATCCCACGCCTCAATCGCTTCCATTGGTC 22420 36 100.0 35 .................................... TTCATGCCGACTGCTCCATTTTGTTTCTAAGTTTG 22349 36 100.0 39 .................................... AAGAATGTAGGCGAGCAACGATCCTTAGAAGATGTTCAG 22274 36 100.0 35 .................................... ATAAAGTCATAATCATTTTTAACCTTATCCAGTGT 22203 36 100.0 40 .................................... ATACAAGTCTGCAAAACAGACTTAAAGCAGATGCAACAAG 22127 36 100.0 37 .................................... GATACCGCAATGGGTCTTCGACAACATATGTTCCCCC 22054 36 100.0 39 .................................... GTATCGCCGCTGATCCGGACGCTCCGAAAGAAGGTGACA 21979 36 97.2 42 ....................C............... GGAAGATACACGGTGCGATTTCAAGATTAGCAAGACAATCAA 21901 36 97.2 37 ..A................................. AGCAGTGGAAACTTGACGTATTTCGAGGTCATGGAAA 21828 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 17 36 99.7 37 CCGAACTTATCTGTGATGCCGTAAGGCGTTGAGCAC # Left flank : GATCCTCGCCGTTGGCGAAAATGCTACAAGATTTTAAACGGCTACGGGGAGCGATTGCAATATTCCGTATTTCGATGTAGTTTGACGGAAAAGCAATTGGCCGAATTGCGCTTCAAGCTTGTGAAGGAGATGGATGCTGTAGATAATCTTTTGATTGCACCGATCCACCCTGAGTATCTTAAGAATGTGTTTGTTCTGAATATGCCCGAAGATTGGGATGCGGAGAAGGACCGTTTCTTGCTGTTTTAGGCAAATCAAGTACCGGGGTCATTATTGAAACAAAGTTGGATAAATGCCGTGAAACCCCTTGTCGGACATGGCTTTTCCGGCAATTTCGTTTCTGCCTTGCTTGAAAGGTTGAAACCCAGCCTTTTTAAAGGGAAAAGTTCCGAAACGCCCGGCGAATTCAGACGCGATTTGCGTACAAGACGTTCTTATCCAGCGGTGCTTGAAAAGACTTGCCACAAACCCTTATCTCGCTTATGCTCAATTTAGGTGCT # Right flank : AGATCGCTGAGGGTGTGAATTTGCACCCCTTCAACTACCTATCTGTTTGAGCGATTGCCCCAGCTTCCCGATTTACTACGATGCCGAGGCCCTTGATAAGCTGCTGCCTCGGTCAATGACATTGCGGCTATGCAGCAGCTTAAAATAAAGCGTTTACAAAAACAGGATATTGAGATACAATTCATTTACAAGTTGATAATGTTGCGCTGAGACGATGAGAGGCATCTTATAGTGATGAGGATTAGGTGAATCCTAATTATCAACATTATGGGTATGTCTCCTTTTTTTATATAAAAATCTAAATACTAACTTGATGGTTGTCGCTAAAAAGTGGCAGATCACTCATATATACTTGGAAATGAAAACAAAATGGTGCACAGAGGCGTGTCTTTATACAGGTCCACCATTATCACATAGATATTTATATTTAATGGTAACGAGGAGGCAGGTACATGACAGCGTTTACAGGCGAATTGATAGGCACGATGATTCTTATTGTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGAACTTATCTGTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //