Array 1 25634-24476 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FEUU01000024.1 Neisseria meningitidis strain 2842STDY5881223, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     25633	    36	  94.4	    30	........G...A.......................	GCGGAACGGGTTGACAGACTGAATTTGAGT	
     25567	    36	  97.2	    30	............A.......................	ATCACTTTTAAAGGCGGCATCGGCTGGTTT	
     25501	    36	 100.0	    30	....................................	AGGGGTCGTGAATGGAGTTCTTGCAGTTCG	
     25435	    36	 100.0	    30	....................................	TGCTACCAGCGACAACAGGCATTACGCCCA	
     25369	    36	 100.0	    30	....................................	TGAGAAAGATTTAAGAACTAAGTTCCCATC	
     25303	    36	 100.0	    30	....................................	TCAGCCTCAAATACATCCGCCAAATCGTTG	
     25237	    36	 100.0	    30	....................................	ACACAATCTCCGCCGTTCCAATCAAATGTG	
     25171	    36	 100.0	    30	....................................	CTGATGAAGATACAACCGCACTAACTTTAC	
     25105	    36	 100.0	    30	....................................	CTCTTCATTGAAGAAGTTATAAGCCTTTGT	
     25039	    36	 100.0	    30	....................................	TTTGGTAAAGGTTTCTGTTGCGACCCGAAT	
     24973	    36	 100.0	    30	....................................	GCCTGCGTACTTGGTACGCTGGTCGCCTCC	
     24907	    36	 100.0	    30	....................................	TTCATAGATCGATGCATGAGGTTTTCATGG	
     24841	    36	 100.0	    30	....................................	AGGTCAAAGTGTCAGGCAAATTTAAAGGTG	
     24775	    36	 100.0	    30	....................................	AAATCCATTTATCGCCCACCCTTTCCGGCC	
     24709	    36	 100.0	    30	....................................	TGCTGAAATTATGGCAAGTATGGGGCAAAG	
     24643	    36	 100.0	    30	....................................	TAGCAAACAAGGAATATTCAAAGTCCTTTA	
     24577	    36	 100.0	    30	....................................	CTTGGAAGCCGAACAGGCAGAAATCAACGC	
     24511	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        18	    36	  99.5	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGAAGCGGTCGATGTGTTTGGCAATCATGGCTTGTGCGGTTTGCTGGAAGAAGGTACTCATGAGAAATCCCCTAAATGTCTTAGTAGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG
# Right flank :  ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : NA
//