Array 1 823686-824015 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMFS01000001.1 Dermacoccus sp. SAI-028 Ga0222402_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 823686 29 96.6 32 ...............A............. GTGGTCTCGTCCTCGGTGACGACGACGCGCCA 823747 29 100.0 32 ............................. GCCATCATGTTCGCCGCGTCGGGCCCGTTCTG 823808 29 100.0 32 ............................. TTCTCCATCGCAGGGATGACCTTCGTGCCGAG 823869 29 96.6 32 .........A................... CGGGGTCACCGTCCGCTGTGGCCGGTGAGGGT 823930 29 100.0 29 ............................. GCGCAGCAGGCCAGTGACTTCGACGCGCT 823988 28 79.3 0 .G.............A.C.-.T......A | ========== ====== ====== ====== ============================= ================================ ================== 6 29 95.4 32 GTCGGCCCCGCGCACGCGGAGATGAGCCC # Left flank : CCTGGCCGCAACGTCGCCGCGAAAGCGGGCCTCAACCGTTCCATCCTCGACGCGAGCTTCGCCGAGATGCGGCGACAACTCACCTACAAGACTTCGTGGTACCGATCGCAGCTCCTGCCCTCAGGGCGCTTCGTTCCCACGAGCAAGACGTGTTCGACGTGCGGGGCAGAGAAAGCCAATCAGCCCCTGTCGAAACGCGTGTACCACTGCGAGAACTGCGCCACGGTGCTCGACCGTGACGTCAACGCGGCCAAGAACATCCTTCGCGCCGCTCTCGCATCCCACGACGCCCCCGGCATGGAGGAGTCGCAAAACGCCCGTGGAGTGCGTATCGAGACATCTGTCGCGCTACGTTCTGCGAAGCGGGAAGACCCACCGCGAGGTGGGCCACCCCGGCCGAGTAATCGCGTCCGGTCATCTCCCCCCAACGGGGAAGCGAAAGTGAAGGCAAACGCTTCCCCCACCAACTGAAAAGCGCGCAAACACAGCACCCCGCAAGG # Right flank : AGCGCGCTTTAGGGCGTCGGTCGGGACCCGCTTAGAGCTCGCCGCACCGTGTCCCGCGACATTCCGTGCAGGCGCGCGATCTCCGAAATGCTCATGCCCGACTCGTACGCCGCGACCATCGCCGAACGCAGCGACGGCGTGACCTTCGCCGGGCGTCCAAGCTTCTTGCCCTGAGCGCGCGCCCGCGCGACACCCTCATTCGTGCGCTCGATCAGTCGGCGGCGCTCGAACTGGGCGAACGCGAGCATGAGGTTGATCTGAGCCTCACCCGCCGCCGAGTGCGGATCGAGCACGCCCATGTCACCGGTCTCGACCGTGACTCCGCGCTGCGCGAGGTCGAGCACGGTCCCCATCGTCTCGAACATCGTGCGCCCCAACCGGTCGATCTTCGAGCACACGATCCGATCCCCGTCATCAACCGCACGCACGAGCGCGTCGAATTCCGGACGCGATTTCTTCGCGCCACTGCACATGTCGGCGTACACGTGCCGTGCGTCAAT # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCACGCGGAGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 3134460-3135037 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMFS01000001.1 Dermacoccus sp. SAI-028 Ga0222402_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3134460 29 100.0 32 ............................. ATGCACCTTCACATCGACGACGGCCCCTGGTC 3134521 29 100.0 32 ............................. CCGCGGGATCGAGGTTCGCATCCCTGAAGTCG 3134582 29 100.0 32 ............................. GGCCCGCATCCACGACCGGCGGCAACGGCGCC 3134643 29 100.0 32 ............................. CCACGGGATCAACGCCATGAGCGCGAGTCCAC 3134704 29 96.6 32 .........A................... CGGGGTCACCGCCCGCTGTGGCTGGGGTGATC 3134765 29 96.6 32 ................G............ GCCGGCACCGAGTTCGGCATCCTCATCGTCAA 3134826 29 100.0 32 ............................. TGACCCGCAACACGCTGATGAAGTGGGCGAAA 3134887 29 100.0 32 ............................. GGTTCGTGTGGCCACGGGTTCACCCTCCGCAG 3134948 29 79.3 32 A........ATA.....A....C...... GAACTCGGTTGAGGTGACGCGCCATGCGGCGT 3135009 29 89.7 0 ..........T....T.......A..... | ========== ====== ====== ====== ============================= ================================ ================== 10 29 96.2 32 GTCGGCCCCGCGCACGCGGAGATGAGCCC # Left flank : CCTGGCCGCAACGTCGCCGCGAAAGCGGGCCTCAACCGTTCCATCCTCGACGCGAGCTTCGCCGAGATGCGGCGACAACTCACCTACAAGACTTCGTGGTACCGATCGCGGCTCCTGCCCTCAGGGCGCTTCGTTCCCACGAGCAGGACGTGTTCGACGTGCGGGGCAGAGAAAGCCAATCTGCCCCTGTCGGAACGCGTGTACCACTGCGAGAACTGCGCCACGGTGCTTGACCGTGACGTCAACGCGGCGAAGAACGTCCTTCGCACCGCTCTCGCATCCCACGACGCCCCCGGCATGGAGGAGTCGCAAAACGCCCGTGGAGTGCGTATCGAGACATCTGTCGCGCTGCGTTCTGCGAAGCGGGAAGACCCACCGCGAGGTGGGCCACCCCGGCCGAGTAATCGCGTCCGGTCATCTCCCCCCGACGGGAAAGCGAAAGTGAAGGCAAACGCTTCTCCCACCAACTAAAAAGCGCGGAAACACAGCACCCCGCAAGG # Right flank : CCGGCTCGCTGCCACACGTCCACGTCATCATCAGTTGGCTCCACGCACGCGGAGTGCAAAACGCATCATCTGGAGACGGTTTTGGCGCCCTGAGTTTGGCCAAGGGTTTTGCACACCTCTGAGAGACGCTGGGGTTCGCATCTGAGCACCCTGCTGCTCGGTGTGCAGAGATGAAGCGTCCCGGGTGTGATGCCGCTTCCTTTCGAGTTCGAGAGGATGTTGTTCATGCCGAAGAAGTTCGATCCCGAGGTGAAGGACCGCGCGGTGCGGATGGTCCTGGACCGCGTCGAGGAAGCCGGGTCCGTCACCAAGGCCGTCGCGTTGGTGTCACCGAAGGTCGACGTGGGCCGTGAAACCTTGCGCCGCTGGGTCTCGCAACACCGCGTCGACGCCGGCCTGAAGGACGGGCCGACCAGCGACGACCTGGCCGAGCTGCGTCGTCTGCGCAGCGAGGTCAAGCGGTTGCGCGAGGACAACGAGCTCCTACGCAAGGCCTCGAT # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCACGCGGAGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //